data_1YZV # _model_server_result.job_id O-CES3kaJkDZKcdVTy3g3Q _model_server_result.datetime_utc '2024-11-05 00:37:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1yzv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 1YZV # _exptl.entry_id 1YZV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1YZV _cell.length_a 121.142 _cell.length_b 121.142 _cell.length_c 121.142 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YZV _symmetry.cell_setting ? _symmetry.Int_Tables_number 207 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA,PQS 24-meric 24 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2,3,4 A,B,C 2 1,2,5,6,7,8,9,10,11,12,13,14,15,16,3,4,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 121.142 121.142 0 3 'crystal symmetry operation' 15_565 y,-x+1,z 0 1 0 -1 0 0 0 0 1 0 121.142 0 4 'crystal symmetry operation' 16_655 -y+1,x,z 0 -1 0 1 0 0 0 0 1 121.142 0 0 5 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 121.142 0 121.142 6 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 121.142 121.142 7 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 6_566 z,-x+1,-y+1 0 0 1 -1 0 0 0 -1 0 0 121.142 121.142 9 'crystal symmetry operation' 7_665 -z+1,-x+1,y 0 0 -1 -1 0 0 0 1 0 121.142 121.142 0 10 'crystal symmetry operation' 8_656 -z+1,x,-y+1 0 0 -1 1 0 0 0 -1 0 121.142 0 121.142 11 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 12 'crystal symmetry operation' 10_656 -y+1,z,-x+1 0 -1 0 0 0 1 -1 0 0 121.142 0 121.142 13 'crystal symmetry operation' 11_566 y,-z+1,-x+1 0 1 0 0 0 -1 -1 0 0 0 121.142 121.142 14 'crystal symmetry operation' 12_665 -y+1,-z+1,x 0 -1 0 0 0 -1 1 0 0 121.142 121.142 0 15 'crystal symmetry operation' 13_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 121.142 16 'crystal symmetry operation' 14_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 121.142 121.142 121.142 17 'crystal symmetry operation' 17_556 x,z,-y+1 1 0 0 0 0 1 0 -1 0 0 0 121.142 18 'crystal symmetry operation' 18_655 -x+1,z,y -1 0 0 0 0 1 0 1 0 121.142 0 0 19 'crystal symmetry operation' 19_666 -x+1,-z+1,-y+1 -1 0 0 0 0 -1 0 -1 0 121.142 121.142 121.142 20 'crystal symmetry operation' 20_565 x,-z+1,y 1 0 0 0 0 -1 0 1 0 0 121.142 0 21 'crystal symmetry operation' 21_556 z,y,-x+1 0 0 1 0 1 0 -1 0 0 0 0 121.142 22 'crystal symmetry operation' 22_565 z,-y+1,x 0 0 1 0 -1 0 1 0 0 0 121.142 0 23 'crystal symmetry operation' 23_655 -z+1,y,x 0 0 -1 0 1 0 1 0 0 121.142 0 0 24 'crystal symmetry operation' 24_666 -z+1,-y+1,-x+1 0 0 -1 0 -1 0 -1 0 0 121.142 121.142 121.142 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1YZV _atom_sites.fract_transf_matrix[1][1] 0.008255 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008255 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008255 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 400 400 SO4 SUL . C 3 HOH A 1 1000 1000 HOH HOH . C 3 HOH A 2 1001 1001 HOH HOH . C 3 HOH A 3 1002 1002 HOH HOH . C 3 HOH A 4 1003 1003 HOH HOH . C 3 HOH A 5 1004 1004 HOH HOH . C 3 HOH A 6 1005 1005 HOH HOH . C 3 HOH A 7 1006 1006 HOH HOH . C 3 HOH A 8 1007 1007 HOH HOH . C 3 HOH A 9 1008 1008 HOH HOH . C 3 HOH A 10 1009 1009 HOH HOH . C 3 HOH A 11 1010 1010 HOH HOH . C 3 HOH A 12 1011 1011 HOH HOH . C 3 HOH A 13 1012 1012 HOH HOH . C 3 HOH A 14 1013 1013 HOH HOH . C 3 HOH A 15 1014 1014 HOH HOH . C 3 HOH A 16 1015 1015 HOH HOH . C 3 HOH A 17 1016 1016 HOH HOH . C 3 HOH A 18 1017 1017 HOH HOH . C 3 HOH A 19 1018 1018 HOH HOH . C 3 HOH A 20 1019 1019 HOH HOH . C 3 HOH A 21 1020 1020 HOH HOH . C 3 HOH A 22 1021 1021 HOH HOH . C 3 HOH A 23 1022 1022 HOH HOH . C 3 HOH A 24 1023 1023 HOH HOH . C 3 HOH A 25 1024 1024 HOH HOH . C 3 HOH A 26 1025 1025 HOH HOH . C 3 HOH A 27 1026 1026 HOH HOH . C 3 HOH A 28 1027 1027 HOH HOH . C 3 HOH A 29 1028 1028 HOH HOH . C 3 HOH A 30 1029 1029 HOH HOH . C 3 HOH A 31 1030 1030 HOH HOH . C 3 HOH A 32 1031 1031 HOH HOH . C 3 HOH A 33 1032 1032 HOH HOH . C 3 HOH A 34 1033 1033 HOH HOH . C 3 HOH A 35 1034 1034 HOH HOH . C 3 HOH A 36 1035 1035 HOH HOH . C 3 HOH A 37 1036 1036 HOH HOH . C 3 HOH A 38 1037 1037 HOH HOH . C 3 HOH A 39 1038 1038 HOH HOH . C 3 HOH A 40 1039 1039 HOH HOH . C 3 HOH A 41 1040 1040 HOH HOH . C 3 HOH A 42 1041 1041 HOH HOH . C 3 HOH A 43 1042 1042 HOH HOH . C 3 HOH A 44 1043 1043 HOH HOH . C 3 HOH A 45 1044 1044 HOH HOH . C 3 HOH A 46 1045 1045 HOH HOH . C 3 HOH A 47 1046 1046 HOH HOH . C 3 HOH A 48 1047 1047 HOH HOH . C 3 HOH A 49 1048 1048 HOH HOH . C 3 HOH A 50 1049 1049 HOH HOH . C 3 HOH A 51 1050 1050 HOH HOH . C 3 HOH A 52 1051 1051 HOH HOH . C 3 HOH A 53 1052 1052 HOH HOH . C 3 HOH A 54 1053 1053 HOH HOH . C 3 HOH A 55 1054 1054 HOH HOH . C 3 HOH A 56 1055 1055 HOH HOH . C 3 HOH A 57 1056 1056 HOH HOH . C 3 HOH A 58 1057 1057 HOH HOH . C 3 HOH A 59 1058 1058 HOH HOH . C 3 HOH A 60 1059 1059 HOH HOH . C 3 HOH A 61 1060 1060 HOH HOH . C 3 HOH A 62 1061 1061 HOH HOH . C 3 HOH A 63 1062 1062 HOH HOH . C 3 HOH A 64 1063 1063 HOH HOH . C 3 HOH A 65 1064 1064 HOH HOH . C 3 HOH A 66 1065 1065 HOH HOH . C 3 HOH A 67 1066 1066 HOH HOH . C 3 HOH A 68 1067 1067 HOH HOH . C 3 HOH A 69 1068 1068 HOH HOH . C 3 HOH A 70 1069 1069 HOH HOH . C 3 HOH A 71 1070 1070 HOH HOH . C 3 HOH A 72 1071 1071 HOH HOH . C 3 HOH A 73 1072 1072 HOH HOH . C 3 HOH A 74 1073 1073 HOH HOH . C 3 HOH A 75 1074 1074 HOH HOH . C 3 HOH A 76 1075 1075 HOH HOH . C 3 HOH A 77 1076 1076 HOH HOH . C 3 HOH A 78 1077 1077 HOH HOH . C 3 HOH A 79 1078 1078 HOH HOH . C 3 HOH A 80 1079 1079 HOH HOH . C 3 HOH A 81 1080 1080 HOH HOH . C 3 HOH A 82 1081 1081 HOH HOH . C 3 HOH A 83 1082 1082 HOH HOH . C 3 HOH A 84 1083 1083 HOH HOH . C 3 HOH A 85 1084 1084 HOH HOH . C 3 HOH A 86 1085 1085 HOH HOH . C 3 HOH A 87 1086 1086 HOH HOH . C 3 HOH A 88 1087 1087 HOH HOH . C 3 HOH A 89 1088 1088 HOH HOH . C 3 HOH A 90 1089 1089 HOH HOH . C 3 HOH A 91 1090 1090 HOH HOH . C 3 HOH A 92 1091 1091 HOH HOH . C 3 HOH A 93 1092 1092 HOH HOH . C 3 HOH A 94 1093 1093 HOH HOH . C 3 HOH A 95 1094 1094 HOH HOH . C 3 HOH A 96 1095 1095 HOH HOH . C 3 HOH A 97 1096 1096 HOH HOH . C 3 HOH A 98 1097 1097 HOH HOH . C 3 HOH A 99 1098 1098 HOH HOH . C 3 HOH A 100 1099 1099 HOH HOH . C 3 HOH A 101 1100 1100 HOH HOH . C 3 HOH A 102 1101 1101 HOH HOH . C 3 HOH A 103 1102 1102 HOH HOH . C 3 HOH A 104 1103 1103 HOH HOH . C 3 HOH A 105 1104 1104 HOH HOH . C 3 HOH A 106 1105 1105 HOH HOH . C 3 HOH A 107 1106 1106 HOH HOH . C 3 HOH A 108 1107 1107 HOH HOH . C 3 HOH A 109 1108 1108 HOH HOH . C 3 HOH A 110 1109 1109 HOH HOH . C 3 HOH A 111 1110 1110 HOH HOH . C 3 HOH A 112 1111 1111 HOH HOH . C 3 HOH A 113 1112 1112 HOH HOH . C 3 HOH A 114 1113 1113 HOH HOH . C 3 HOH A 115 1114 1114 HOH HOH . C 3 HOH A 116 1115 1115 HOH HOH . C 3 HOH A 117 1116 1116 HOH HOH . C 3 HOH A 118 1117 1117 HOH HOH . C 3 HOH A 119 1118 1118 HOH HOH . C 3 HOH A 120 1119 1119 HOH HOH . C 3 HOH A 121 1120 1120 HOH HOH . C 3 HOH A 122 1121 1121 HOH HOH . C 3 HOH A 123 1122 1122 HOH HOH . C 3 HOH A 124 1123 1123 HOH HOH . C 3 HOH A 125 1124 1124 HOH HOH . C 3 HOH A 126 1125 1125 HOH HOH . C 3 HOH A 127 1126 1126 HOH HOH . C 3 HOH A 128 1127 1127 HOH HOH . C 3 HOH A 129 1128 1128 HOH HOH . C 3 HOH A 130 1129 1129 HOH HOH . C 3 HOH A 131 1130 1130 HOH HOH . C 3 HOH A 132 1131 1131 HOH HOH . C 3 HOH A 133 1132 1132 HOH HOH . C 3 HOH A 134 1133 1133 HOH HOH . C 3 HOH A 135 1134 1134 HOH HOH . C 3 HOH A 136 1135 1135 HOH HOH . C 3 HOH A 137 1136 1136 HOH HOH . C 3 HOH A 138 1137 1137 HOH HOH . C 3 HOH A 139 1138 1138 HOH HOH . C 3 HOH A 140 1139 1139 HOH HOH . C 3 HOH A 141 1140 1140 HOH HOH . C 3 HOH A 142 1141 1141 HOH HOH . C 3 HOH A 143 1142 1142 HOH HOH . C 3 HOH A 144 1143 1143 HOH HOH . C 3 HOH A 145 1144 1144 HOH HOH . C 3 HOH A 146 1145 1145 HOH HOH . C 3 HOH A 147 1146 1146 HOH HOH . C 3 HOH A 148 1147 1147 HOH HOH . C 3 HOH A 149 1148 1148 HOH HOH . C 3 HOH A 150 1149 1149 HOH HOH . C 3 HOH A 151 1150 1150 HOH HOH . C 3 HOH A 152 1151 1151 HOH HOH . C 3 HOH A 153 1152 1152 HOH HOH . C 3 HOH A 154 1153 1153 HOH HOH . C 3 HOH A 155 1154 1154 HOH HOH . C 3 HOH A 156 1155 1155 HOH HOH . C 3 HOH A 157 1156 1156 HOH HOH . C 3 HOH A 158 1157 1157 HOH HOH . C 3 HOH A 159 1158 1158 HOH HOH . C 3 HOH A 160 1159 1159 HOH HOH . C 3 HOH A 161 1160 1160 HOH HOH . C 3 HOH A 162 1161 1161 HOH HOH . C 3 HOH A 163 1162 1162 HOH HOH . C 3 HOH A 164 1163 1163 HOH HOH . C 3 HOH A 165 1164 1164 HOH HOH . C 3 HOH A 166 1165 1165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 60.732 41.036 116.643 1 43.45 ? S SO4 400 A 1 HETATM 2 O O1 SO4 . . . B 2 61.537 39.894 116.114 1 35.08 ? O1 SO4 400 A 1 HETATM 3 O O2 SO4 . . . B 2 59.709 41.525 115.681 1 47.93 ? O2 SO4 400 A 1 HETATM 4 O O3 SO4 . . . B 2 61.556 42.242 116.959 1 41.68 ? O3 SO4 400 A 1 HETATM 5 O O4 SO4 . . . B 2 60.103 40.626 117.884 1 41.18 ? O4 SO4 400 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #