data_1YZX
#
_model_server_result.job_id            8wKYpwFHpSyG41PxrrvZZg 
_model_server_result.datetime_utc      '2024-11-12 21:08:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1yzx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    1YZX 
#
_exptl.entry_id    1YZX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              339.322 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.67 
_cell.angle_gamma         90 
_cell.entry_id            1YZX 
_cell.length_a            98.275 
_cell.length_b            118.274 
_cell.length_c            52.591 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1YZX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H17 N3 O8 S' 
_chem_comp.formula_weight    339.322 
_chem_comp.id                GSF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'GLUTATHIONE SULFINATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CB1 CG1 GSF sing 129 n n 
CB1 CA1 GSF sing 130 n n 
CB1 HB11 GSF sing 131 n n 
CB1 HB12 GSF sing 132 n n 
CG1 CD1 GSF sing 133 n n 
CG1 HG11 GSF sing 134 n n 
CG1 HG12 GSF sing 135 n n 
CD1 OE1 GSF doub 136 n n 
CD1 N2 GSF sing 137 n n 
C1 O11 GSF sing 138 n n 
C1 O12 GSF doub 139 n n 
C1 CA1 GSF sing 140 n n 
O11 H11 GSF sing 141 n n 
N1 CA1 GSF sing 142 n n 
N1 HN11 GSF sing 143 n n 
N1 HN12 GSF sing 144 n n 
CA1 HA1 GSF sing 145 n n 
N2 CA2 GSF sing 146 n n 
N2 HN2 GSF sing 147 n n 
CA2 CB2 GSF sing 148 n n 
CA2 C2 GSF sing 149 n n 
CA2 HA2 GSF sing 150 n n 
CB2 SG2 GSF sing 151 n n 
CB2 HB21 GSF sing 152 n n 
CB2 HB22 GSF sing 153 n n 
SG2 O1S GSF doub 154 n n 
SG2 O2S GSF sing 155 n n 
O2S H2S GSF sing 156 n n 
C2 O2 GSF doub 157 n n 
C2 N3 GSF sing 158 n n 
N3 CA3 GSF sing 159 n n 
N3 HN3 GSF sing 160 n n 
CA3 C3 GSF sing 161 n n 
CA3 HA31 GSF sing 162 n n 
CA3 HA32 GSF sing 163 n n 
C3 O31 GSF sing 164 n n 
C3 O32 GSF doub 165 n n 
O31 H31 GSF sing 166 n n 
#
_atom_sites.entry_id                     1YZX 
_atom_sites.fract_transf_matrix[1][1]    0.010176 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002288 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008455 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019489 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GSF A 1 301 301 GSF GSF . 
D 2 GSF B 1 1301 301 GSF GSF . 
E 3 HOH A 1 401 401 HOH HOH . 
E 3 HOH A 2 402 402 HOH HOH . 
E 3 HOH A 3 403 403 HOH HOH . 
E 3 HOH A 4 404 404 HOH HOH . 
E 3 HOH A 5 406 406 HOH HOH . 
E 3 HOH A 6 407 407 HOH HOH . 
E 3 HOH A 7 408 408 HOH HOH . 
E 3 HOH A 8 410 410 HOH HOH . 
E 3 HOH A 9 411 411 HOH HOH . 
E 3 HOH A 10 412 412 HOH HOH . 
E 3 HOH A 11 413 413 HOH HOH . 
E 3 HOH A 12 418 418 HOH HOH . 
E 3 HOH A 13 420 420 HOH HOH . 
E 3 HOH A 14 421 421 HOH HOH . 
E 3 HOH A 15 423 423 HOH HOH . 
E 3 HOH A 16 424 424 HOH HOH . 
E 3 HOH A 17 425 425 HOH HOH . 
E 3 HOH A 18 426 426 HOH HOH . 
E 3 HOH A 19 430 430 HOH HOH . 
E 3 HOH A 20 433 433 HOH HOH . 
E 3 HOH A 21 434 434 HOH HOH . 
E 3 HOH A 22 435 435 HOH HOH . 
E 3 HOH A 23 438 438 HOH HOH . 
E 3 HOH A 24 441 441 HOH HOH . 
E 3 HOH A 25 443 443 HOH HOH . 
E 3 HOH A 26 446 446 HOH HOH . 
E 3 HOH A 27 448 448 HOH HOH . 
E 3 HOH A 28 449 449 HOH HOH . 
E 3 HOH A 29 450 450 HOH HOH . 
E 3 HOH A 30 454 454 HOH HOH . 
E 3 HOH A 31 458 458 HOH HOH . 
E 3 HOH A 32 459 459 HOH HOH . 
E 3 HOH A 33 461 461 HOH HOH . 
E 3 HOH A 34 462 462 HOH HOH . 
E 3 HOH A 35 463 463 HOH HOH . 
E 3 HOH A 36 467 467 HOH HOH . 
E 3 HOH A 37 470 470 HOH HOH . 
E 3 HOH A 38 472 472 HOH HOH . 
E 3 HOH A 39 473 473 HOH HOH . 
E 3 HOH A 40 474 474 HOH HOH . 
E 3 HOH A 41 475 475 HOH HOH . 
E 3 HOH A 42 476 476 HOH HOH . 
E 3 HOH A 43 477 477 HOH HOH . 
E 3 HOH A 44 478 478 HOH HOH . 
E 3 HOH A 45 479 479 HOH HOH . 
E 3 HOH A 46 480 480 HOH HOH . 
E 3 HOH A 47 481 481 HOH HOH . 
E 3 HOH A 48 482 482 HOH HOH . 
E 3 HOH A 49 483 483 HOH HOH . 
E 3 HOH A 50 485 485 HOH HOH . 
E 3 HOH A 51 486 486 HOH HOH . 
E 3 HOH A 52 487 487 HOH HOH . 
E 3 HOH A 53 493 493 HOH HOH . 
E 3 HOH A 54 495 495 HOH HOH . 
E 3 HOH A 55 496 496 HOH HOH . 
E 3 HOH A 56 498 498 HOH HOH . 
E 3 HOH A 57 500 500 HOH HOH . 
E 3 HOH A 58 506 506 HOH HOH . 
E 3 HOH A 59 507 507 HOH HOH . 
E 3 HOH A 60 508 508 HOH HOH . 
E 3 HOH A 61 510 510 HOH HOH . 
E 3 HOH A 62 511 511 HOH HOH . 
E 3 HOH A 63 512 512 HOH HOH . 
E 3 HOH A 64 518 518 HOH HOH . 
E 3 HOH A 65 519 519 HOH HOH . 
E 3 HOH A 66 520 520 HOH HOH . 
E 3 HOH A 67 521 521 HOH HOH . 
E 3 HOH A 68 522 522 HOH HOH . 
E 3 HOH A 69 523 523 HOH HOH . 
E 3 HOH A 70 527 527 HOH HOH . 
E 3 HOH A 71 528 528 HOH HOH . 
E 3 HOH A 72 532 532 HOH HOH . 
E 3 HOH A 73 533 533 HOH HOH . 
E 3 HOH A 74 534 534 HOH HOH . 
E 3 HOH A 75 535 535 HOH HOH . 
E 3 HOH A 76 537 537 HOH HOH . 
E 3 HOH A 77 538 538 HOH HOH . 
E 3 HOH A 78 539 539 HOH HOH . 
E 3 HOH A 79 540 540 HOH HOH . 
E 3 HOH A 80 550 550 HOH HOH . 
E 3 HOH A 81 551 551 HOH HOH . 
E 3 HOH A 82 553 553 HOH HOH . 
E 3 HOH A 83 556 556 HOH HOH . 
E 3 HOH A 84 559 559 HOH HOH . 
E 3 HOH A 85 560 560 HOH HOH . 
E 3 HOH A 86 564 564 HOH HOH . 
E 3 HOH A 87 566 566 HOH HOH . 
E 3 HOH A 88 567 567 HOH HOH . 
E 3 HOH A 89 569 569 HOH HOH . 
E 3 HOH A 90 570 570 HOH HOH . 
E 3 HOH A 91 573 573 HOH HOH . 
E 3 HOH A 92 575 575 HOH HOH . 
E 3 HOH A 93 577 577 HOH HOH . 
E 3 HOH A 94 578 578 HOH HOH . 
E 3 HOH A 95 579 579 HOH HOH . 
F 3 HOH B 1 405 405 HOH HOH . 
F 3 HOH B 2 409 409 HOH HOH . 
F 3 HOH B 3 414 414 HOH HOH . 
F 3 HOH B 4 415 415 HOH HOH . 
F 3 HOH B 5 416 416 HOH HOH . 
F 3 HOH B 6 417 417 HOH HOH . 
F 3 HOH B 7 419 419 HOH HOH . 
F 3 HOH B 8 422 422 HOH HOH . 
F 3 HOH B 9 427 427 HOH HOH . 
F 3 HOH B 10 428 428 HOH HOH . 
F 3 HOH B 11 429 429 HOH HOH . 
F 3 HOH B 12 431 431 HOH HOH . 
F 3 HOH B 13 432 432 HOH HOH . 
F 3 HOH B 14 436 436 HOH HOH . 
F 3 HOH B 15 437 437 HOH HOH . 
F 3 HOH B 16 439 439 HOH HOH . 
F 3 HOH B 17 440 440 HOH HOH . 
F 3 HOH B 18 442 442 HOH HOH . 
F 3 HOH B 19 444 444 HOH HOH . 
F 3 HOH B 20 445 445 HOH HOH . 
F 3 HOH B 21 447 447 HOH HOH . 
F 3 HOH B 22 451 451 HOH HOH . 
F 3 HOH B 23 452 452 HOH HOH . 
F 3 HOH B 24 453 453 HOH HOH . 
F 3 HOH B 25 455 455 HOH HOH . 
F 3 HOH B 26 456 456 HOH HOH . 
F 3 HOH B 27 457 457 HOH HOH . 
F 3 HOH B 28 460 460 HOH HOH . 
F 3 HOH B 29 464 464 HOH HOH . 
F 3 HOH B 30 465 465 HOH HOH . 
F 3 HOH B 31 466 466 HOH HOH . 
F 3 HOH B 32 468 468 HOH HOH . 
F 3 HOH B 33 469 469 HOH HOH . 
F 3 HOH B 34 471 471 HOH HOH . 
F 3 HOH B 35 484 484 HOH HOH . 
F 3 HOH B 36 488 488 HOH HOH . 
F 3 HOH B 37 489 489 HOH HOH . 
F 3 HOH B 38 490 490 HOH HOH . 
F 3 HOH B 39 491 491 HOH HOH . 
F 3 HOH B 40 492 492 HOH HOH . 
F 3 HOH B 41 494 494 HOH HOH . 
F 3 HOH B 42 497 497 HOH HOH . 
F 3 HOH B 43 499 499 HOH HOH . 
F 3 HOH B 44 501 501 HOH HOH . 
F 3 HOH B 45 502 502 HOH HOH . 
F 3 HOH B 46 503 503 HOH HOH . 
F 3 HOH B 47 504 504 HOH HOH . 
F 3 HOH B 48 505 505 HOH HOH . 
F 3 HOH B 49 509 509 HOH HOH . 
F 3 HOH B 50 513 513 HOH HOH . 
F 3 HOH B 51 514 514 HOH HOH . 
F 3 HOH B 52 515 515 HOH HOH . 
F 3 HOH B 53 516 516 HOH HOH . 
F 3 HOH B 54 517 517 HOH HOH . 
F 3 HOH B 55 524 524 HOH HOH . 
F 3 HOH B 56 525 525 HOH HOH . 
F 3 HOH B 57 526 526 HOH HOH . 
F 3 HOH B 58 529 529 HOH HOH . 
F 3 HOH B 59 530 530 HOH HOH . 
F 3 HOH B 60 531 531 HOH HOH . 
F 3 HOH B 61 536 536 HOH HOH . 
F 3 HOH B 62 541 541 HOH HOH . 
F 3 HOH B 63 542 542 HOH HOH . 
F 3 HOH B 64 543 543 HOH HOH . 
F 3 HOH B 65 544 544 HOH HOH . 
F 3 HOH B 66 545 545 HOH HOH . 
F 3 HOH B 67 546 546 HOH HOH . 
F 3 HOH B 68 547 547 HOH HOH . 
F 3 HOH B 69 548 548 HOH HOH . 
F 3 HOH B 70 549 549 HOH HOH . 
F 3 HOH B 71 552 552 HOH HOH . 
F 3 HOH B 72 554 554 HOH HOH . 
F 3 HOH B 73 555 555 HOH HOH . 
F 3 HOH B 74 557 557 HOH HOH . 
F 3 HOH B 75 558 558 HOH HOH . 
F 3 HOH B 76 561 561 HOH HOH . 
F 3 HOH B 77 562 562 HOH HOH . 
F 3 HOH B 78 563 563 HOH HOH . 
F 3 HOH B 79 565 565 HOH HOH . 
F 3 HOH B 80 568 568 HOH HOH . 
F 3 HOH B 81 571 571 HOH HOH . 
F 3 HOH B 82 572 572 HOH HOH . 
F 3 HOH B 83 574 574 HOH HOH . 
F 3 HOH B 84 576 576 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CB1 GSF . . . C 2 16.511 68.341 3.553 1 25.32 ? CB1 GSF 301 A 1 
HETATM 2 C CG1 GSF . . . C 2 16.459 66.861 2.991 1 22.65 ? CG1 GSF 301 A 1 
HETATM 3 C CD1 GSF . . . C 2 15.03 66.261 2.988 1 22.86 ? CD1 GSF 301 A 1 
HETATM 4 O OE1 GSF . . . C 2 14.066 66.937 3.407 1 22.43 ? OE1 GSF 301 A 1 
HETATM 5 C C1 GSF . . . C 2 18.589 69.313 2.322 1 25.5 ? C1 GSF 301 A 1 
HETATM 6 O O11 GSF . . . C 2 18.975 68.284 1.723 1 23.51 ? O11 GSF 301 A 1 
HETATM 7 O O12 GSF . . . C 2 18.77 70.457 1.905 1 23.29 ? O12 GSF 301 A 1 
HETATM 8 N N1 GSF . . . C 2 17.477 70.499 4.232 1 26 ? N1 GSF 301 A 1 
HETATM 9 C CA1 GSF . . . C 2 17.842 69.152 3.664 1 26.96 ? CA1 GSF 301 A 1 
HETATM 10 N N2 GSF . . . C 2 14.875 64.964 2.516 1 20.54 ? N2 GSF 301 A 1 
HETATM 11 C CA2 GSF . . . C 2 13.506 64.263 2.485 1 22.24 ? CA2 GSF 301 A 1 
HETATM 12 C CB2 GSF . . . C 2 13.38 63.537 1.169 1 23.58 ? CB2 GSF 301 A 1 
HETATM 13 S SG2 GSF . . . C 2 13.212 64.493 -0.272 1 22.97 ? SG2 GSF 301 A 1 
HETATM 14 O O1S GSF . . . C 2 14.491 64.532 -1.058 1 22.08 ? O1S GSF 301 A 1 
HETATM 15 O O2S GSF . . . C 2 12.14 63.743 -0.938 1 24.2 ? O2S GSF 301 A 1 
HETATM 16 C C2 GSF . . . C 2 13.589 63.409 3.74 1 24.77 ? C2 GSF 301 A 1 
HETATM 17 O O2 GSF . . . C 2 13.979 62.224 3.755 1 24.77 ? O2 GSF 301 A 1 
HETATM 18 N N3 GSF . . . C 2 13.153 64.119 4.821 1 22.97 ? N3 GSF 301 A 1 
HETATM 19 C CA3 GSF . . . C 2 13.112 63.51 6.187 1 25.03 ? CA3 GSF 301 A 1 
HETATM 20 C C3 GSF . . . C 2 12.584 64.511 7.194 1 30.13 ? C3 GSF 301 A 1 
HETATM 21 O O31 GSF . . . C 2 12.284 64.051 8.305 1 29.1 ? O31 GSF 301 A 1 
HETATM 22 O O32 GSF . . . C 2 12.465 65.726 6.885 1 28.99 ? O32 GSF 301 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           211 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#