data_1Z25 # _model_server_result.job_id uTwUgOwDksfbPs_aRy5QBA _model_server_result.datetime_utc '2025-03-21 05:14:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":771}' # _entry.id 1Z25 # _exptl.entry_id 1Z25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.7 _cell.angle_gamma 90 _cell.entry_id 1Z25 _cell.length_a 68.662 _cell.length_b 105.108 _cell.length_c 73.662 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 629 A ASP 628 1_555 B MN MN . A MN 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc2 A ND1 HIS 746 A HIS 745 1_555 B MN MN . A MN 771 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc3 B MN MN . A MN 771 1_555 C O HOH . A HOH 774 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc4 B MN MN . A MN 771 1_555 C O HOH . A HOH 781 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc5 B MN MN . A MN 771 1_555 C O HOH . A HOH 788 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Z25 _atom_sites.fract_transf_matrix[1][1] 0.014564 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003281 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013916 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 771 1 MN MN . C 3 HOH A 1 772 1 HOH TIP . C 3 HOH A 2 773 2 HOH TIP . C 3 HOH A 3 774 3 HOH TIP . C 3 HOH A 4 775 4 HOH TIP . C 3 HOH A 5 776 5 HOH TIP . C 3 HOH A 6 777 6 HOH TIP . C 3 HOH A 7 778 7 HOH TIP . C 3 HOH A 8 779 8 HOH TIP . C 3 HOH A 9 780 9 HOH TIP . C 3 HOH A 10 781 10 HOH TIP . C 3 HOH A 11 782 11 HOH TIP . C 3 HOH A 12 783 12 HOH TIP . C 3 HOH A 13 784 13 HOH TIP . C 3 HOH A 14 785 14 HOH TIP . C 3 HOH A 15 786 15 HOH TIP . C 3 HOH A 16 787 16 HOH TIP . C 3 HOH A 17 788 17 HOH TIP . C 3 HOH A 18 789 18 HOH TIP . C 3 HOH A 19 790 19 HOH TIP . C 3 HOH A 20 791 20 HOH TIP . C 3 HOH A 21 792 21 HOH TIP . C 3 HOH A 22 793 22 HOH TIP . C 3 HOH A 23 794 23 HOH TIP . C 3 HOH A 24 795 24 HOH TIP . C 3 HOH A 25 796 25 HOH TIP . C 3 HOH A 26 797 26 HOH TIP . C 3 HOH A 27 798 27 HOH TIP . C 3 HOH A 28 799 28 HOH TIP . C 3 HOH A 29 800 29 HOH TIP . C 3 HOH A 30 801 30 HOH TIP . C 3 HOH A 31 802 31 HOH TIP . C 3 HOH A 32 803 32 HOH TIP . C 3 HOH A 33 804 33 HOH TIP . C 3 HOH A 34 805 34 HOH TIP . C 3 HOH A 35 806 35 HOH TIP . C 3 HOH A 36 807 36 HOH TIP . C 3 HOH A 37 808 37 HOH TIP . C 3 HOH A 38 809 38 HOH TIP . C 3 HOH A 39 810 39 HOH TIP . C 3 HOH A 40 811 40 HOH TIP . C 3 HOH A 41 812 41 HOH TIP . C 3 HOH A 42 813 42 HOH TIP . C 3 HOH A 43 814 43 HOH TIP . C 3 HOH A 44 815 44 HOH TIP . C 3 HOH A 45 816 45 HOH TIP . C 3 HOH A 46 817 46 HOH TIP . C 3 HOH A 47 818 47 HOH TIP . C 3 HOH A 48 819 48 HOH TIP . C 3 HOH A 49 820 49 HOH TIP . C 3 HOH A 50 821 50 HOH TIP . C 3 HOH A 51 822 51 HOH TIP . C 3 HOH A 52 823 52 HOH TIP . C 3 HOH A 53 824 53 HOH TIP . C 3 HOH A 54 825 54 HOH TIP . C 3 HOH A 55 826 55 HOH TIP . C 3 HOH A 56 827 56 HOH TIP . C 3 HOH A 57 828 57 HOH TIP . C 3 HOH A 58 829 58 HOH TIP . C 3 HOH A 59 830 59 HOH TIP . C 3 HOH A 60 831 60 HOH TIP . C 3 HOH A 61 832 61 HOH TIP . C 3 HOH A 62 833 62 HOH TIP . C 3 HOH A 63 834 63 HOH TIP . C 3 HOH A 64 835 64 HOH TIP . C 3 HOH A 65 836 65 HOH TIP . C 3 HOH A 66 837 66 HOH TIP . C 3 HOH A 67 838 67 HOH TIP . C 3 HOH A 68 839 68 HOH TIP . C 3 HOH A 69 840 69 HOH TIP . C 3 HOH A 70 841 70 HOH TIP . C 3 HOH A 71 842 71 HOH TIP . C 3 HOH A 72 843 72 HOH TIP . C 3 HOH A 73 844 73 HOH TIP . C 3 HOH A 74 845 74 HOH TIP . C 3 HOH A 75 846 75 HOH TIP . C 3 HOH A 76 847 76 HOH TIP . C 3 HOH A 77 848 77 HOH TIP . C 3 HOH A 78 849 78 HOH TIP . C 3 HOH A 79 850 79 HOH TIP . C 3 HOH A 80 851 80 HOH TIP . C 3 HOH A 81 852 81 HOH TIP . C 3 HOH A 82 853 82 HOH TIP . C 3 HOH A 83 854 83 HOH TIP . C 3 HOH A 84 855 84 HOH TIP . C 3 HOH A 85 856 85 HOH TIP . C 3 HOH A 86 857 86 HOH TIP . C 3 HOH A 87 858 87 HOH TIP . C 3 HOH A 88 859 88 HOH TIP . C 3 HOH A 89 860 89 HOH TIP . C 3 HOH A 90 861 90 HOH TIP . C 3 HOH A 91 862 91 HOH TIP . C 3 HOH A 92 863 92 HOH TIP . C 3 HOH A 93 864 93 HOH TIP . C 3 HOH A 94 865 94 HOH TIP . C 3 HOH A 95 866 95 HOH TIP . C 3 HOH A 96 867 96 HOH TIP . C 3 HOH A 97 868 97 HOH TIP . C 3 HOH A 98 869 98 HOH TIP . C 3 HOH A 99 870 99 HOH TIP . C 3 HOH A 100 871 100 HOH TIP . C 3 HOH A 101 872 101 HOH TIP . C 3 HOH A 102 873 102 HOH TIP . C 3 HOH A 103 874 103 HOH TIP . C 3 HOH A 104 875 104 HOH TIP . C 3 HOH A 105 876 105 HOH TIP . C 3 HOH A 106 877 106 HOH TIP . C 3 HOH A 107 878 107 HOH TIP . C 3 HOH A 108 879 108 HOH TIP . C 3 HOH A 109 880 109 HOH TIP . C 3 HOH A 110 881 110 HOH TIP . C 3 HOH A 111 882 111 HOH TIP . C 3 HOH A 112 883 112 HOH TIP . C 3 HOH A 113 884 113 HOH TIP . C 3 HOH A 114 885 114 HOH TIP . C 3 HOH A 115 886 115 HOH TIP . C 3 HOH A 116 887 116 HOH TIP . C 3 HOH A 117 888 117 HOH TIP . C 3 HOH A 118 889 118 HOH TIP . C 3 HOH A 119 890 119 HOH TIP . C 3 HOH A 120 891 120 HOH TIP . C 3 HOH A 121 892 121 HOH TIP . C 3 HOH A 122 893 122 HOH TIP . C 3 HOH A 123 894 123 HOH TIP . C 3 HOH A 124 895 124 HOH TIP . C 3 HOH A 125 896 125 HOH TIP . C 3 HOH A 126 897 126 HOH TIP . C 3 HOH A 127 898 127 HOH TIP . C 3 HOH A 128 899 128 HOH TIP . C 3 HOH A 129 900 129 HOH TIP . C 3 HOH A 130 901 130 HOH TIP . C 3 HOH A 131 902 131 HOH TIP . C 3 HOH A 132 903 132 HOH TIP . C 3 HOH A 133 904 133 HOH TIP . C 3 HOH A 134 905 134 HOH TIP . C 3 HOH A 135 906 135 HOH TIP . C 3 HOH A 136 907 136 HOH TIP . C 3 HOH A 137 908 137 HOH TIP . C 3 HOH A 138 909 138 HOH TIP . C 3 HOH A 139 910 139 HOH TIP . C 3 HOH A 140 911 140 HOH TIP . C 3 HOH A 141 912 141 HOH TIP . C 3 HOH A 142 913 142 HOH TIP . C 3 HOH A 143 914 143 HOH TIP . C 3 HOH A 144 915 144 HOH TIP . C 3 HOH A 145 916 145 HOH TIP . C 3 HOH A 146 917 146 HOH TIP . C 3 HOH A 147 918 147 HOH TIP . C 3 HOH A 148 919 148 HOH TIP . C 3 HOH A 149 920 149 HOH TIP . C 3 HOH A 150 921 150 HOH TIP . C 3 HOH A 151 922 151 HOH TIP . C 3 HOH A 152 923 152 HOH TIP . C 3 HOH A 153 924 153 HOH TIP . C 3 HOH A 154 925 154 HOH TIP . C 3 HOH A 155 926 155 HOH TIP . C 3 HOH A 156 927 156 HOH TIP . C 3 HOH A 157 928 157 HOH TIP . C 3 HOH A 158 929 158 HOH TIP . C 3 HOH A 159 930 159 HOH TIP . C 3 HOH A 160 931 160 HOH TIP . C 3 HOH A 161 932 161 HOH TIP . C 3 HOH A 162 933 162 HOH TIP . C 3 HOH A 163 934 163 HOH TIP . C 3 HOH A 164 935 164 HOH TIP . C 3 HOH A 165 936 165 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.6 _atom_site.Cartn_y 21.178 _atom_site.Cartn_z 43.605 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 771 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #