data_1Z4J # _model_server_result.job_id cXVmkWp7pX4pj17kJ5ofVQ _model_server_result.datetime_utc '2024-11-13 10:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2001}' # _entry.id 1Z4J # _exptl.entry_id 1Z4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z4J _cell.length_a 73.453 _cell.length_b 73.453 _cell.length_c 106.085 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 73.453 73.453 53.0425 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 10 A ASN 41 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc2 A O ASP 12 A ASP 43 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? metalc ? metalc3 A O ALA 88 A ALA 119 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc4 A O LEU 90 A LEU 121 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc5 A O THR 93 A THR 124 1_555 C MG MG . A MG 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc6 A OD1 ASP 145 A ASP 176 1_555 B MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc7 B MG MG . A MG 1001 1_555 D O2P U2P . A U2P 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc8 B MG MG . A MG 1001 1_555 F O HOH . A HOH 4004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc9 B MG MG . A MG 1001 1_555 F O HOH . A HOH 4008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc10 C MG MG . A MG 2001 1_555 F O HOH . A HOH 4146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc11 C MG MG . A MG 2001 1_555 F O HOH . A HOH 4147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc12 C MG MG . A MG 2001 1_555 F O HOH . A HOH 4149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Z4J _atom_sites.fract_transf_matrix[1][1] 0.013614 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013614 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009426 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1001 1 MG MG . C 2 MG A 1 2001 1 MG MG . D 3 U2P A 1 3001 1 U2P UUU . E 4 GOL A 1 4001 1 GOL GLC . F 5 HOH A 1 4002 1 HOH HOH . F 5 HOH A 2 4003 2 HOH HOH . F 5 HOH A 3 4004 3 HOH HOH . F 5 HOH A 4 4005 4 HOH HOH . F 5 HOH A 5 4006 5 HOH HOH . F 5 HOH A 6 4007 6 HOH HOH . F 5 HOH A 7 4008 7 HOH HOH . F 5 HOH A 8 4009 8 HOH HOH . F 5 HOH A 9 4010 9 HOH HOH . F 5 HOH A 10 4011 10 HOH HOH . F 5 HOH A 11 4012 11 HOH HOH . F 5 HOH A 12 4013 12 HOH HOH . F 5 HOH A 13 4014 13 HOH HOH . F 5 HOH A 14 4015 14 HOH HOH . F 5 HOH A 15 4016 15 HOH HOH . F 5 HOH A 16 4017 16 HOH HOH . F 5 HOH A 17 4018 17 HOH HOH . F 5 HOH A 18 4019 18 HOH HOH . F 5 HOH A 19 4020 19 HOH HOH . F 5 HOH A 20 4021 20 HOH HOH . F 5 HOH A 21 4022 21 HOH HOH . F 5 HOH A 22 4023 22 HOH HOH . F 5 HOH A 23 4024 23 HOH HOH . F 5 HOH A 24 4025 24 HOH HOH . F 5 HOH A 25 4026 25 HOH HOH . F 5 HOH A 26 4027 26 HOH HOH . F 5 HOH A 27 4028 27 HOH HOH . F 5 HOH A 28 4029 28 HOH HOH . F 5 HOH A 29 4030 29 HOH HOH . F 5 HOH A 30 4031 30 HOH HOH . F 5 HOH A 31 4032 31 HOH HOH . F 5 HOH A 32 4033 32 HOH HOH . F 5 HOH A 33 4034 33 HOH HOH . F 5 HOH A 34 4035 34 HOH HOH . F 5 HOH A 35 4036 35 HOH HOH . F 5 HOH A 36 4037 36 HOH HOH . F 5 HOH A 37 4038 37 HOH HOH . F 5 HOH A 38 4039 38 HOH HOH . F 5 HOH A 39 4040 39 HOH HOH . F 5 HOH A 40 4041 40 HOH HOH . F 5 HOH A 41 4042 41 HOH HOH . F 5 HOH A 42 4043 42 HOH HOH . F 5 HOH A 43 4044 43 HOH HOH . F 5 HOH A 44 4045 44 HOH HOH . F 5 HOH A 45 4046 45 HOH HOH . F 5 HOH A 46 4047 46 HOH HOH . F 5 HOH A 47 4048 47 HOH HOH . F 5 HOH A 48 4049 48 HOH HOH . F 5 HOH A 49 4050 49 HOH HOH . F 5 HOH A 50 4051 50 HOH HOH . F 5 HOH A 51 4052 51 HOH HOH . F 5 HOH A 52 4053 52 HOH HOH . F 5 HOH A 53 4054 53 HOH HOH . F 5 HOH A 54 4055 54 HOH HOH . F 5 HOH A 55 4056 55 HOH HOH . F 5 HOH A 56 4057 56 HOH HOH . F 5 HOH A 57 4058 57 HOH HOH . F 5 HOH A 58 4059 58 HOH HOH . F 5 HOH A 59 4060 59 HOH HOH . F 5 HOH A 60 4061 60 HOH HOH . F 5 HOH A 61 4062 61 HOH HOH . F 5 HOH A 62 4063 62 HOH HOH . F 5 HOH A 63 4064 63 HOH HOH . F 5 HOH A 64 4065 64 HOH HOH . F 5 HOH A 65 4066 65 HOH HOH . F 5 HOH A 66 4067 66 HOH HOH . F 5 HOH A 67 4068 67 HOH HOH . F 5 HOH A 68 4069 68 HOH HOH . F 5 HOH A 69 4070 69 HOH HOH . F 5 HOH A 70 4071 70 HOH HOH . F 5 HOH A 71 4072 71 HOH HOH . F 5 HOH A 72 4073 72 HOH HOH . F 5 HOH A 73 4074 73 HOH HOH . F 5 HOH A 74 4075 74 HOH HOH . F 5 HOH A 75 4076 75 HOH HOH . F 5 HOH A 76 4077 76 HOH HOH . F 5 HOH A 77 4078 77 HOH HOH . F 5 HOH A 78 4079 78 HOH HOH . F 5 HOH A 79 4080 79 HOH HOH . F 5 HOH A 80 4081 80 HOH HOH . F 5 HOH A 81 4082 81 HOH HOH . F 5 HOH A 82 4083 82 HOH HOH . F 5 HOH A 83 4084 83 HOH HOH . F 5 HOH A 84 4085 84 HOH HOH . F 5 HOH A 85 4086 85 HOH HOH . F 5 HOH A 86 4087 86 HOH HOH . F 5 HOH A 87 4088 87 HOH HOH . F 5 HOH A 88 4089 88 HOH HOH . F 5 HOH A 89 4090 89 HOH HOH . F 5 HOH A 90 4091 90 HOH HOH . F 5 HOH A 91 4092 91 HOH HOH . F 5 HOH A 92 4093 92 HOH HOH . F 5 HOH A 93 4094 93 HOH HOH . F 5 HOH A 94 4095 94 HOH HOH . F 5 HOH A 95 4096 95 HOH HOH . F 5 HOH A 96 4097 96 HOH HOH . F 5 HOH A 97 4098 97 HOH HOH . F 5 HOH A 98 4099 98 HOH HOH . F 5 HOH A 99 4100 99 HOH HOH . F 5 HOH A 100 4101 100 HOH HOH . F 5 HOH A 101 4102 101 HOH HOH . F 5 HOH A 102 4103 102 HOH HOH . F 5 HOH A 103 4104 103 HOH HOH . F 5 HOH A 104 4105 104 HOH HOH . F 5 HOH A 105 4106 105 HOH HOH . F 5 HOH A 106 4107 106 HOH HOH . F 5 HOH A 107 4108 107 HOH HOH . F 5 HOH A 108 4109 108 HOH HOH . F 5 HOH A 109 4110 109 HOH HOH . F 5 HOH A 110 4111 110 HOH HOH . F 5 HOH A 111 4112 112 HOH HOH . F 5 HOH A 112 4113 113 HOH HOH . F 5 HOH A 113 4114 114 HOH HOH . F 5 HOH A 114 4115 115 HOH HOH . F 5 HOH A 115 4116 116 HOH HOH . F 5 HOH A 116 4117 117 HOH HOH . F 5 HOH A 117 4118 119 HOH HOH . F 5 HOH A 118 4119 120 HOH HOH . F 5 HOH A 119 4120 121 HOH HOH . F 5 HOH A 120 4121 122 HOH HOH . F 5 HOH A 121 4122 123 HOH HOH . F 5 HOH A 122 4123 124 HOH HOH . F 5 HOH A 123 4124 125 HOH HOH . F 5 HOH A 124 4125 126 HOH HOH . F 5 HOH A 125 4126 127 HOH HOH . F 5 HOH A 126 4127 128 HOH HOH . F 5 HOH A 127 4128 129 HOH HOH . F 5 HOH A 128 4129 130 HOH HOH . F 5 HOH A 129 4130 131 HOH HOH . F 5 HOH A 130 4131 132 HOH HOH . F 5 HOH A 131 4132 133 HOH HOH . F 5 HOH A 132 4133 134 HOH HOH . F 5 HOH A 133 4134 135 HOH HOH . F 5 HOH A 134 4135 136 HOH HOH . F 5 HOH A 135 4136 137 HOH HOH . F 5 HOH A 136 4137 138 HOH HOH . F 5 HOH A 137 4138 139 HOH HOH . F 5 HOH A 138 4139 140 HOH HOH . F 5 HOH A 139 4140 141 HOH HOH . F 5 HOH A 140 4141 142 HOH HOH . F 5 HOH A 141 4142 143 HOH HOH . F 5 HOH A 142 4143 144 HOH HOH . F 5 HOH A 143 4144 145 HOH HOH . F 5 HOH A 144 4145 146 HOH HOH . F 5 HOH A 145 4146 147 HOH HOH . F 5 HOH A 146 4147 148 HOH HOH . F 5 HOH A 147 4148 149 HOH HOH . F 5 HOH A 148 4149 150 HOH HOH . F 5 HOH A 149 4150 151 HOH HOH . F 5 HOH A 150 4151 152 HOH HOH . F 5 HOH A 151 4152 153 HOH HOH . F 5 HOH A 152 4153 154 HOH HOH . F 5 HOH A 153 4154 155 HOH HOH . F 5 HOH A 154 4155 156 HOH HOH . F 5 HOH A 155 4156 157 HOH HOH . F 5 HOH A 156 4157 158 HOH HOH . F 5 HOH A 157 4158 159 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 33.541 _atom_site.Cartn_y 43.902 _atom_site.Cartn_z 44.877 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.96 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 2001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #