data_1Z4R # _model_server_result.job_id AvaVMdib55K6JSuUX5ynRA _model_server_result.datetime_utc '2025-02-26 16:14:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 1Z4R # _exptl.entry_id 1Z4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1Z4R _cell.length_a 38.09 _cell.length_b 38.09 _cell.length_c 186.34 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 1Z4R _atom_sites.fract_transf_matrix[1][1] 0.026254 _atom_sites.fract_transf_matrix[1][2] 0.015158 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACO A 1 401 401 ACO COA . C 3 HOH A 1 1000 1000 HOH HOH . C 3 HOH A 2 1001 1001 HOH HOH . C 3 HOH A 3 1002 1002 HOH HOH . C 3 HOH A 4 1003 1003 HOH HOH . C 3 HOH A 5 1004 1004 HOH HOH . C 3 HOH A 6 1005 1005 HOH HOH . C 3 HOH A 7 1006 1006 HOH HOH . C 3 HOH A 8 1007 1007 HOH HOH . C 3 HOH A 9 1008 1008 HOH HOH . C 3 HOH A 10 1009 1009 HOH HOH . C 3 HOH A 11 1010 1010 HOH HOH . C 3 HOH A 12 1011 1011 HOH HOH . C 3 HOH A 13 1012 1012 HOH HOH . C 3 HOH A 14 1013 1013 HOH HOH . C 3 HOH A 15 1014 1014 HOH HOH . C 3 HOH A 16 1015 1015 HOH HOH . C 3 HOH A 17 1016 1016 HOH HOH . C 3 HOH A 18 1017 1017 HOH HOH . C 3 HOH A 19 1018 1018 HOH HOH . C 3 HOH A 20 1019 1019 HOH HOH . C 3 HOH A 21 1020 1020 HOH HOH . C 3 HOH A 22 1021 1021 HOH HOH . C 3 HOH A 23 1022 1022 HOH HOH . C 3 HOH A 24 1023 1023 HOH HOH . C 3 HOH A 25 1024 1024 HOH HOH . C 3 HOH A 26 1025 1025 HOH HOH . C 3 HOH A 27 1026 1026 HOH HOH . C 3 HOH A 28 1027 1027 HOH HOH . C 3 HOH A 29 1028 1028 HOH HOH . C 3 HOH A 30 1029 1029 HOH HOH . C 3 HOH A 31 1030 1030 HOH HOH . C 3 HOH A 32 1031 1031 HOH HOH . C 3 HOH A 33 1032 1032 HOH HOH . C 3 HOH A 34 1033 1033 HOH HOH . C 3 HOH A 35 1034 1034 HOH HOH . C 3 HOH A 36 1035 1035 HOH HOH . C 3 HOH A 37 1036 1036 HOH HOH . C 3 HOH A 38 1037 1037 HOH HOH . C 3 HOH A 39 1038 1038 HOH HOH . C 3 HOH A 40 1039 1039 HOH HOH . C 3 HOH A 41 1040 1040 HOH HOH . C 3 HOH A 42 1041 1041 HOH HOH . C 3 HOH A 43 1042 1042 HOH HOH . C 3 HOH A 44 1043 1043 HOH HOH . C 3 HOH A 45 1044 1044 HOH HOH . C 3 HOH A 46 1045 1045 HOH HOH . C 3 HOH A 47 1046 1046 HOH HOH . C 3 HOH A 48 1047 1047 HOH HOH . C 3 HOH A 49 1048 1048 HOH HOH . C 3 HOH A 50 1049 1049 HOH HOH . C 3 HOH A 51 1050 1050 HOH HOH . C 3 HOH A 52 1051 1051 HOH HOH . C 3 HOH A 53 1052 1052 HOH HOH . C 3 HOH A 54 1053 1053 HOH HOH . C 3 HOH A 55 1054 1054 HOH HOH . C 3 HOH A 56 1055 1055 HOH HOH . C 3 HOH A 57 1056 1056 HOH HOH . C 3 HOH A 58 1057 1057 HOH HOH . C 3 HOH A 59 1058 1058 HOH HOH . C 3 HOH A 60 1059 1059 HOH HOH . C 3 HOH A 61 1060 1060 HOH HOH . C 3 HOH A 62 1061 1061 HOH HOH . C 3 HOH A 63 1062 1062 HOH HOH . C 3 HOH A 64 1063 1063 HOH HOH . C 3 HOH A 65 1064 1064 HOH HOH . C 3 HOH A 66 1065 1065 HOH HOH . C 3 HOH A 67 1066 1066 HOH HOH . C 3 HOH A 68 1067 1067 HOH HOH . C 3 HOH A 69 1068 1068 HOH HOH . C 3 HOH A 70 1069 1069 HOH HOH . C 3 HOH A 71 1070 1070 HOH HOH . C 3 HOH A 72 1071 1071 HOH HOH . C 3 HOH A 73 1072 1072 HOH HOH . C 3 HOH A 74 1073 1073 HOH HOH . C 3 HOH A 75 1074 1074 HOH HOH . C 3 HOH A 76 1075 1075 HOH HOH . C 3 HOH A 77 1076 1076 HOH HOH . C 3 HOH A 78 1077 1077 HOH HOH . C 3 HOH A 79 1078 1078 HOH HOH . C 3 HOH A 80 1079 1079 HOH HOH . C 3 HOH A 81 1080 1080 HOH HOH . C 3 HOH A 82 1081 1081 HOH HOH . C 3 HOH A 83 1082 1082 HOH HOH . C 3 HOH A 84 1083 1083 HOH HOH . C 3 HOH A 85 1084 1084 HOH HOH . C 3 HOH A 86 1085 1085 HOH HOH . C 3 HOH A 87 1086 1086 HOH HOH . C 3 HOH A 88 1087 1087 HOH HOH . C 3 HOH A 89 1088 1088 HOH HOH . C 3 HOH A 90 1089 1089 HOH HOH . C 3 HOH A 91 1090 1090 HOH HOH . C 3 HOH A 92 1091 1091 HOH HOH . C 3 HOH A 93 1092 1092 HOH HOH . C 3 HOH A 94 1093 1093 HOH HOH . C 3 HOH A 95 1094 1094 HOH HOH . C 3 HOH A 96 1095 1095 HOH HOH . C 3 HOH A 97 1096 1096 HOH HOH . C 3 HOH A 98 1097 1097 HOH HOH . C 3 HOH A 99 1098 1098 HOH HOH . C 3 HOH A 100 1099 1099 HOH HOH . C 3 HOH A 101 1100 1100 HOH HOH . C 3 HOH A 102 1101 1101 HOH HOH . C 3 HOH A 103 1102 1102 HOH HOH . C 3 HOH A 104 1103 1103 HOH HOH . C 3 HOH A 105 1104 1104 HOH HOH . C 3 HOH A 106 1105 1105 HOH HOH . C 3 HOH A 107 1106 1106 HOH HOH . C 3 HOH A 108 1107 1107 HOH HOH . C 3 HOH A 109 1108 1108 HOH HOH . C 3 HOH A 110 1109 1109 HOH HOH . C 3 HOH A 111 1110 1110 HOH HOH . C 3 HOH A 112 1111 1111 HOH HOH . C 3 HOH A 113 1112 1112 HOH HOH . C 3 HOH A 114 1113 1113 HOH HOH . C 3 HOH A 115 1114 1114 HOH HOH . C 3 HOH A 116 1115 1115 HOH HOH . C 3 HOH A 117 1116 1116 HOH HOH . C 3 HOH A 118 1117 1117 HOH HOH . C 3 HOH A 119 1118 1118 HOH HOH . C 3 HOH A 120 1119 1119 HOH HOH . C 3 HOH A 121 1120 1120 HOH HOH . C 3 HOH A 122 1121 1121 HOH HOH . C 3 HOH A 123 1122 1122 HOH HOH . C 3 HOH A 124 1123 1123 HOH HOH . C 3 HOH A 125 1124 1124 HOH HOH . C 3 HOH A 126 1125 1125 HOH HOH . C 3 HOH A 127 1126 1126 HOH HOH . C 3 HOH A 128 1127 1127 HOH HOH . C 3 HOH A 129 1128 1128 HOH HOH . C 3 HOH A 130 1129 1129 HOH HOH . C 3 HOH A 131 1130 1130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . B 2 0.483 5.257 -9.709 1 16.9 ? N1A ACO 401 A 1 HETATM 2 C C2A ACO . . . B 2 -0.477 4.603 -9.049 1 17.94 ? C2A ACO 401 A 1 HETATM 3 N N3A ACO . . . B 2 -1.807 4.588 -9.374 1 15.3 ? N3A ACO 401 A 1 HETATM 4 C C4A ACO . . . B 2 -2.103 5.336 -10.519 1 17.23 ? C4A ACO 401 A 1 HETATM 5 C C5A ACO . . . B 2 -1.163 6.025 -11.258 1 16.71 ? C5A ACO 401 A 1 HETATM 6 C C6A ACO . . . B 2 0.223 5.985 -10.801 1 18.62 ? C6A ACO 401 A 1 HETATM 7 N N6A ACO . . . B 2 1.198 6.639 -11.435 1 18.1 ? N6A ACO 401 A 1 HETATM 8 N N7A ACO . . . B 2 -1.782 6.647 -12.344 1 16.79 ? N7A ACO 401 A 1 HETATM 9 C C8A ACO . . . B 2 -3.042 6.333 -12.224 1 16.67 ? C8A ACO 401 A 1 HETATM 10 N N9A ACO . . . B 2 -3.321 5.541 -11.137 1 18.56 ? N9A ACO 401 A 1 HETATM 11 C C1B ACO . . . B 2 -4.589 5.026 -10.741 1 17.86 ? C1B ACO 401 A 1 HETATM 12 C C2B ACO . . . B 2 -4.705 3.497 -10.731 1 19.43 ? C2B ACO 401 A 1 HETATM 13 O O2B ACO . . . B 2 -4.823 3.009 -12.084 1 19.36 ? O2B ACO 401 A 1 HETATM 14 C C3B ACO . . . B 2 -5.927 3.276 -9.811 1 21.4 ? C3B ACO 401 A 1 HETATM 15 O O3B ACO . . . B 2 -7.104 3.418 -10.59 1 25.93 ? O3B ACO 401 A 1 HETATM 16 P P3B ACO . . . B 2 -8.018 2.21 -11.07 1 30.1 ? P3B ACO 401 A 1 HETATM 17 O O7A ACO . . . B 2 -7.152 1.517 -12.079 1 31.41 ? O7A ACO 401 A 1 HETATM 18 O O8A ACO . . . B 2 -9.177 2.829 -11.684 1 30.51 ? O8A ACO 401 A 1 HETATM 19 O O9A ACO . . . B 2 -8.303 1.389 -9.864 1 32.17 ? O9A ACO 401 A 1 HETATM 20 C C4B ACO . . . B 2 -5.869 4.433 -8.845 1 21.61 ? C4B ACO 401 A 1 HETATM 21 O O4B ACO . . . B 2 -4.918 5.362 -9.419 1 17.68 ? O4B ACO 401 A 1 HETATM 22 C C5B ACO . . . B 2 -5.566 4.125 -7.406 1 25.59 ? C5B ACO 401 A 1 HETATM 23 O O5B ACO . . . B 2 -5.318 2.722 -7.204 1 25.64 ? O5B ACO 401 A 1 HETATM 24 P P1A ACO . . . B 2 -5.429 2.094 -5.753 1 19.62 ? P1A ACO 401 A 1 HETATM 25 O O1A ACO . . . B 2 -5.63 0.645 -5.872 1 18.99 ? O1A ACO 401 A 1 HETATM 26 O O2A ACO . . . B 2 -6.403 2.939 -4.96 1 19.32 ? O2A ACO 401 A 1 HETATM 27 O O3A ACO . . . B 2 -3.859 2.338 -5.406 1 21.92 ? O3A ACO 401 A 1 HETATM 28 P P2A ACO . . . B 2 -2.888 1.655 -4.403 1 20.23 ? P2A ACO 401 A 1 HETATM 29 O O4A ACO . . . B 2 -2.066 0.836 -5.303 1 20.19 ? O4A ACO 401 A 1 HETATM 30 O O5A ACO . . . B 2 -3.63 0.992 -3.292 1 22.16 ? O5A ACO 401 A 1 HETATM 31 O O6A ACO . . . B 2 -2.04 2.83 -3.841 1 18.03 ? O6A ACO 401 A 1 HETATM 32 C CBP ACO . . . B 2 -0.16 4.395 -4.177 1 16.52 ? CBP ACO 401 A 1 HETATM 33 C CCP ACO . . . B 2 -1.466 3.888 -4.73 1 17.79 ? CCP ACO 401 A 1 HETATM 34 C CDP ACO . . . B 2 0.254 5.646 -5.032 1 17.07 ? CDP ACO 401 A 1 HETATM 35 C CEP ACO . . . B 2 -0.349 4.795 -2.688 1 18.39 ? CEP ACO 401 A 1 HETATM 36 C CAP ACO . . . B 2 0.9 3.242 -4.38 1 17.89 ? CAP ACO 401 A 1 HETATM 37 O OAP ACO . . . B 2 1.145 2.998 -5.767 1 16.63 ? OAP ACO 401 A 1 HETATM 38 C C9P ACO . . . B 2 2.249 3.458 -3.659 1 17.15 ? C9P ACO 401 A 1 HETATM 39 O O9P ACO . . . B 2 2.375 3.309 -2.449 1 16.91 ? O9P ACO 401 A 1 HETATM 40 N N8P ACO . . . B 2 3.296 3.837 -4.451 1 18.92 ? N8P ACO 401 A 1 HETATM 41 C C7P ACO . . . B 2 4.668 4.081 -3.952 1 20.85 ? C7P ACO 401 A 1 HETATM 42 C C6P ACO . . . B 2 4.81 5.348 -3.09 1 20.24 ? C6P ACO 401 A 1 HETATM 43 C C5P ACO . . . B 2 4.515 6.608 -3.857 1 22.85 ? C5P ACO 401 A 1 HETATM 44 O O5P ACO . . . B 2 4.982 6.793 -5.01 1 23.4 ? O5P ACO 401 A 1 HETATM 45 N N4P ACO . . . B 2 3.831 7.568 -3.265 1 21.95 ? N4P ACO 401 A 1 HETATM 46 C C3P ACO . . . B 2 3.52 8.955 -3.631 1 26.49 ? C3P ACO 401 A 1 HETATM 47 C C2P ACO . . . B 2 4.877 9.689 -3.554 1 26.96 ? C2P ACO 401 A 1 HETATM 48 S S1P ACO . . . B 2 4.528 11.528 -3.653 1 29.52 ? S1P ACO 401 A 1 HETATM 49 C C ACO . . . B 2 4.057 11.815 -2.222 1 29.71 ? C ACO 401 A 1 HETATM 50 O O ACO . . . B 2 3.888 11 -1.199 1 28.65 ? O ACO 401 A 1 HETATM 51 C CH3 ACO . . . B 2 3.632 13.252 -1.554 1 28.17 ? CH3 ACO 401 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 51 #