data_1Z5N
#
_model_server_result.job_id            0JQbi8DyBgEg5Y0UZjwqfg 
_model_server_result.datetime_utc      '2024-11-26 06:43:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1z5n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":234}' 
#
_entry.id    1Z5N 
#
_exptl.entry_id    1Z5N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              135.127 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ADENINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1Z5N 
_cell.length_a            51.68 
_cell.length_b            69.46 
_cell.length_c            128.36 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Z5N 
_symmetry.cell_setting             orthorhombic 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C5 H5 N5' 
_chem_comp.formula_weight    135.127 
_chem_comp.id                ADE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ADENINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C8 ADE sing 1 n y 
N9 C4 ADE sing 2 n y 
N9 HN9 ADE sing 3 n n 
C8 N7 ADE doub 4 n y 
C8 H8 ADE sing 5 n n 
N7 C5 ADE sing 6 n y 
C5 C6 ADE sing 7 n y 
C5 C4 ADE doub 8 n y 
C6 N6 ADE sing 9 n n 
C6 N1 ADE doub 10 n y 
N6 HN61 ADE sing 11 n n 
N6 HN62 ADE sing 12 n n 
N1 C2 ADE sing 13 n y 
C2 N3 ADE doub 14 n y 
C2 H2 ADE sing 15 n n 
N3 C4 ADE sing 16 n y 
#
_atom_sites.entry_id                     1Z5N 
_atom_sites.fract_transf_matrix[1][1]    0.01935 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014397 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007791 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SR1 A 1 233 233 SR1 SR1 . 
D 3 ADE A 1 234 234 ADE ADE . 
E 2 SR1 B 1 235 235 SR1 SR1 . 
F 3 ADE B 1 236 236 ADE ADE . 
G 4 HOH A 1 235 2 HOH HOH . 
G 4 HOH A 2 236 4 HOH HOH . 
G 4 HOH A 3 237 11 HOH HOH . 
G 4 HOH A 4 238 12 HOH HOH . 
G 4 HOH A 5 239 15 HOH HOH . 
G 4 HOH A 6 240 18 HOH HOH . 
G 4 HOH A 7 241 19 HOH HOH . 
G 4 HOH A 8 242 20 HOH HOH . 
G 4 HOH A 9 243 21 HOH HOH . 
G 4 HOH A 10 244 22 HOH HOH . 
G 4 HOH A 11 245 23 HOH HOH . 
G 4 HOH A 12 246 24 HOH HOH . 
G 4 HOH A 13 247 25 HOH HOH . 
G 4 HOH A 14 248 26 HOH HOH . 
G 4 HOH A 15 249 29 HOH HOH . 
G 4 HOH A 16 250 33 HOH HOH . 
G 4 HOH A 17 251 34 HOH HOH . 
G 4 HOH A 18 252 35 HOH HOH . 
G 4 HOH A 19 253 37 HOH HOH . 
G 4 HOH A 20 254 38 HOH HOH . 
G 4 HOH A 21 255 39 HOH HOH . 
G 4 HOH A 22 256 40 HOH HOH . 
G 4 HOH A 23 257 41 HOH HOH . 
G 4 HOH A 24 258 42 HOH HOH . 
G 4 HOH A 25 259 44 HOH HOH . 
G 4 HOH A 26 260 50 HOH HOH . 
G 4 HOH A 27 261 53 HOH HOH . 
G 4 HOH A 28 262 54 HOH HOH . 
G 4 HOH A 29 263 55 HOH HOH . 
G 4 HOH A 30 264 56 HOH HOH . 
G 4 HOH A 31 265 57 HOH HOH . 
G 4 HOH A 32 266 60 HOH HOH . 
G 4 HOH A 33 267 62 HOH HOH . 
G 4 HOH A 34 268 66 HOH HOH . 
G 4 HOH A 35 269 68 HOH HOH . 
G 4 HOH A 36 270 71 HOH HOH . 
G 4 HOH A 37 271 72 HOH HOH . 
G 4 HOH A 38 272 73 HOH HOH . 
G 4 HOH A 39 273 74 HOH HOH . 
G 4 HOH A 40 274 75 HOH HOH . 
G 4 HOH A 41 275 77 HOH HOH . 
G 4 HOH A 42 276 79 HOH HOH . 
G 4 HOH A 43 277 80 HOH HOH . 
G 4 HOH A 44 278 85 HOH HOH . 
G 4 HOH A 45 279 88 HOH HOH . 
G 4 HOH A 46 280 92 HOH HOH . 
G 4 HOH A 47 281 94 HOH HOH . 
G 4 HOH A 48 282 95 HOH HOH . 
G 4 HOH A 49 283 96 HOH HOH . 
G 4 HOH A 50 284 100 HOH HOH . 
G 4 HOH A 51 285 102 HOH HOH . 
G 4 HOH A 52 286 103 HOH HOH . 
G 4 HOH A 53 287 107 HOH HOH . 
G 4 HOH A 54 288 108 HOH HOH . 
G 4 HOH A 55 289 109 HOH HOH . 
G 4 HOH A 56 290 110 HOH HOH . 
G 4 HOH A 57 291 111 HOH HOH . 
G 4 HOH A 58 292 113 HOH HOH . 
G 4 HOH A 59 293 118 HOH HOH . 
G 4 HOH A 60 294 119 HOH HOH . 
G 4 HOH A 61 295 120 HOH HOH . 
G 4 HOH A 62 296 121 HOH HOH . 
G 4 HOH A 63 297 125 HOH HOH . 
H 4 HOH B 1 237 1 HOH HOH . 
H 4 HOH B 2 238 3 HOH HOH . 
H 4 HOH B 3 239 5 HOH HOH . 
H 4 HOH B 4 240 6 HOH HOH . 
H 4 HOH B 5 241 7 HOH HOH . 
H 4 HOH B 6 242 8 HOH HOH . 
H 4 HOH B 7 243 9 HOH HOH . 
H 4 HOH B 8 244 10 HOH HOH . 
H 4 HOH B 9 245 13 HOH HOH . 
H 4 HOH B 10 246 14 HOH HOH . 
H 4 HOH B 11 247 16 HOH HOH . 
H 4 HOH B 12 248 17 HOH HOH . 
H 4 HOH B 13 249 27 HOH HOH . 
H 4 HOH B 14 250 28 HOH HOH . 
H 4 HOH B 15 251 30 HOH HOH . 
H 4 HOH B 16 252 31 HOH HOH . 
H 4 HOH B 17 253 32 HOH HOH . 
H 4 HOH B 18 254 36 HOH HOH . 
H 4 HOH B 19 255 43 HOH HOH . 
H 4 HOH B 20 256 45 HOH HOH . 
H 4 HOH B 21 257 46 HOH HOH . 
H 4 HOH B 22 258 47 HOH HOH . 
H 4 HOH B 23 259 48 HOH HOH . 
H 4 HOH B 24 260 49 HOH HOH . 
H 4 HOH B 25 261 51 HOH HOH . 
H 4 HOH B 26 262 52 HOH HOH . 
H 4 HOH B 27 263 58 HOH HOH . 
H 4 HOH B 28 264 59 HOH HOH . 
H 4 HOH B 29 265 61 HOH HOH . 
H 4 HOH B 30 266 63 HOH HOH . 
H 4 HOH B 31 267 64 HOH HOH . 
H 4 HOH B 32 268 65 HOH HOH . 
H 4 HOH B 33 269 67 HOH HOH . 
H 4 HOH B 34 270 69 HOH HOH . 
H 4 HOH B 35 271 70 HOH HOH . 
H 4 HOH B 36 272 76 HOH HOH . 
H 4 HOH B 37 273 78 HOH HOH . 
H 4 HOH B 38 274 81 HOH HOH . 
H 4 HOH B 39 275 82 HOH HOH . 
H 4 HOH B 40 276 83 HOH HOH . 
H 4 HOH B 41 277 84 HOH HOH . 
H 4 HOH B 42 278 86 HOH HOH . 
H 4 HOH B 43 279 87 HOH HOH . 
H 4 HOH B 44 280 89 HOH HOH . 
H 4 HOH B 45 281 90 HOH HOH . 
H 4 HOH B 46 282 91 HOH HOH . 
H 4 HOH B 47 283 93 HOH HOH . 
H 4 HOH B 48 284 97 HOH HOH . 
H 4 HOH B 49 285 98 HOH HOH . 
H 4 HOH B 50 286 99 HOH HOH . 
H 4 HOH B 51 287 101 HOH HOH . 
H 4 HOH B 52 288 104 HOH HOH . 
H 4 HOH B 53 289 105 HOH HOH . 
H 4 HOH B 54 290 106 HOH HOH . 
H 4 HOH B 55 291 112 HOH HOH . 
H 4 HOH B 56 292 114 HOH HOH . 
H 4 HOH B 57 293 115 HOH HOH . 
H 4 HOH B 58 294 116 HOH HOH . 
H 4 HOH B 59 295 117 HOH HOH . 
H 4 HOH B 60 296 122 HOH HOH . 
H 4 HOH B 61 297 123 HOH HOH . 
H 4 HOH B 62 298 124 HOH HOH . 
H 4 HOH B 63 299 126 HOH HOH . 
H 4 HOH B 64 300 127 HOH HOH . 
H 4 HOH B 65 301 128 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 ADE . . . D 3 56.859 74.376 19.376 1 20.89 ? N9 ADE 234 A 1 
HETATM 2 C C8 ADE . . . D 3 56.79 73.965 18.092 1 18.86 ? C8 ADE 234 A 1 
HETATM 3 N N7 ADE . . . D 3 55.529 73.956 17.592 1 19.47 ? N7 ADE 234 A 1 
HETATM 4 C C5 ADE . . . D 3 54.76 74.395 18.637 1 19.47 ? C5 ADE 234 A 1 
HETATM 5 C C6 ADE . . . D 3 53.355 74.617 18.793 1 19.89 ? C6 ADE 234 A 1 
HETATM 6 N N6 ADE . . . D 3 52.511 74.394 17.798 1 18.17 ? N6 ADE 234 A 1 
HETATM 7 N N1 ADE . . . D 3 52.903 75.074 20.034 1 21.65 ? N1 ADE 234 A 1 
HETATM 8 C C2 ADE . . . D 3 53.799 75.29 21.034 1 21.11 ? C2 ADE 234 A 1 
HETATM 9 N N3 ADE . . . D 3 55.161 75.106 20.974 1 22.43 ? N3 ADE 234 A 1 
HETATM 10 C C4 ADE . . . D 3 55.558 74.657 19.747 1 19.07 ? C4 ADE 234 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#