data_1Z5X
#
_model_server_result.job_id            wQ-rjEBL1rhcS3t5WBY6Uw 
_model_server_result.datetime_utc      '2025-07-18 23:09:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1z5x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":5}' 
#
_entry.id    1Z5X 
#
_exptl.entry_id    1Z5X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              464.635 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1Z5X 
_cell.length_a            143.005 
_cell.length_b            143.005 
_cell.length_c            84.015 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1Z5X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H44 O6' 
_chem_comp.formula_weight    464.635 
_chem_comp.id                P1A 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'PONASTERONE A;25-DEOXYECDYSTERONE;25-DEOXY-20-HYDROXYECDYSONE,' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C5 C10 P1A sing 235 n n 
C5 C4 P1A sing 236 n n 
C5 C6 P1A sing 237 n n 
C5 H5 P1A sing 238 n n 
C10 C1 P1A sing 239 n n 
C10 C9 P1A sing 240 n n 
C10 C19 P1A sing 241 n n 
C1 C2 P1A sing 242 n n 
C1 H11 P1A sing 243 n n 
C1 H12 P1A sing 244 n n 
C2 C3 P1A sing 245 n n 
C2 O2 P1A sing 246 n n 
C2 H2 P1A sing 247 n n 
C3 C4 P1A sing 248 n n 
C3 O3 P1A sing 249 n n 
C3 H3 P1A sing 250 n n 
C4 H41 P1A sing 251 n n 
C4 H42 P1A sing 252 n n 
C9 C11 P1A sing 253 n n 
C9 C8 P1A sing 254 n n 
C9 H9 P1A sing 255 n n 
C19 H191 P1A sing 256 n n 
C19 H192 P1A sing 257 n n 
C19 H193 P1A sing 258 n n 
C11 C12 P1A sing 259 n n 
C11 H111 P1A sing 260 n n 
C11 H112 P1A sing 261 n n 
C8 C14 P1A sing 262 n n 
C8 C7 P1A doub 263 n n 
C12 C13 P1A sing 264 n n 
C12 H121 P1A sing 265 n n 
C12 H122 P1A sing 266 n n 
C14 C13 P1A sing 267 n n 
C14 O14 P1A sing 268 n n 
C14 C15 P1A sing 269 n n 
C13 C18 P1A sing 270 n n 
C13 C17 P1A sing 271 n n 
C18 H181 P1A sing 272 n n 
C18 H182 P1A sing 273 n n 
C18 H183 P1A sing 274 n n 
C17 C20 P1A sing 275 n n 
C17 C16 P1A sing 276 n n 
C17 H17 P1A sing 277 n n 
O14 H14 P1A sing 278 n n 
C15 C16 P1A sing 279 n n 
C15 H151 P1A sing 280 n n 
C15 H152 P1A sing 281 n n 
C20 C22 P1A sing 282 n n 
C20 O20 P1A sing 283 n n 
C20 C21 P1A sing 284 n n 
C16 H161 P1A sing 285 n n 
C16 H162 P1A sing 286 n n 
C22 O22 P1A sing 287 n n 
C22 C23 P1A sing 288 n n 
C22 H22 P1A sing 289 n n 
O20 H20 P1A sing 290 n n 
C21 H211 P1A sing 291 n n 
C21 H212 P1A sing 292 n n 
C21 H213 P1A sing 293 n n 
C6 C7 P1A sing 294 n n 
C6 O6 P1A doub 295 n n 
C7 H7 P1A sing 296 n n 
O3 HO3 P1A sing 297 n n 
O2 HO2 P1A sing 298 n n 
O22 H1 P1A sing 299 n n 
C23 C24 P1A sing 300 n n 
C23 H231 P1A sing 301 n n 
C23 H232 P1A sing 302 n n 
C24 C25 P1A sing 303 n n 
C24 H241 P1A sing 304 n n 
C24 H242 P1A sing 305 n n 
C25 C26 P1A sing 306 n n 
C25 C27 P1A sing 307 n n 
C25 H25 P1A sing 308 n n 
C26 H261 P1A sing 309 n n 
C26 H262 P1A sing 310 n n 
C26 H263 P1A sing 311 n n 
C27 H271 P1A sing 312 n n 
C27 H272 P1A sing 313 n n 
C27 H273 P1A sing 314 n n 
#
_atom_sites.entry_id                     1Z5X 
_atom_sites.fract_transf_matrix[1][1]    0.006993 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006993 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011903 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 PO4 U 1 1 1 PO4 PO4 . 
D 3 PO4 U 1 2 2 PO4 PO4 . 
E 3 PO4 U 1 3 3 PO4 PO4 . 
F 3 PO4 E 1 4 4 PO4 PO4 . 
G 4 P1A E 1 5 1 P1A PON . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C5 P1A . . . G 4 22.927 65.679 3.758 1 30.81 ? C5 P1A 5 E 1 
HETATM 2 C C10 P1A . . . G 4 23.441 67.156 4.046 1 29.23 ? C10 P1A 5 E 1 
HETATM 3 C C1 P1A . . . G 4 24.365 67.114 5.289 1 35.06 ? C1 P1A 5 E 1 
HETATM 4 C C2 P1A . . . G 4 23.687 66.508 6.523 1 37.97 ? C2 P1A 5 E 1 
HETATM 5 C C3 P1A . . . G 4 23.15 65.064 6.265 1 36.03 ? C3 P1A 5 E 1 
HETATM 6 C C4 P1A . . . G 4 22.176 65.084 5.024 1 33.37 ? C4 P1A 5 E 1 
HETATM 7 C C9 P1A . . . G 4 22.125 68.074 4.307 1 30.99 ? C9 P1A 5 E 1 
HETATM 8 C C19 P1A . . . G 4 24.255 67.664 2.827 1 24.09 ? C19 P1A 5 E 1 
HETATM 9 C C11 P1A . . . G 4 22.56 69.547 4.592 1 31.95 ? C11 P1A 5 E 1 
HETATM 10 C C8 P1A . . . G 4 21.13 67.924 3.082 1 37.25 ? C8 P1A 5 E 1 
HETATM 11 C C12 P1A . . . G 4 21.489 70.626 4.357 1 37.72 ? C12 P1A 5 E 1 
HETATM 12 C C14 P1A . . . G 4 20.134 69.048 2.915 1 38.93 ? C14 P1A 5 E 1 
HETATM 13 C C13 P1A . . . G 4 20.762 70.529 2.973 1 36.1 ? C13 P1A 5 E 1 
HETATM 14 C C18 P1A . . . G 4 21.769 70.748 1.787 1 31.82 ? C18 P1A 5 E 1 
HETATM 15 C C17 P1A . . . G 4 19.416 71.3 2.743 1 35.1 ? C17 P1A 5 E 1 
HETATM 16 O O14 P1A . . . G 4 19.25 68.89 4.074 1 49.11 ? O14 P1A 5 E 1 
HETATM 17 C C15 P1A . . . G 4 19.155 69.066 1.737 1 40.52 ? C15 P1A 5 E 1 
HETATM 18 C C20 P1A . . . G 4 19.466 72.863 2.472 1 35.58 ? C20 P1A 5 E 1 
HETATM 19 C C16 P1A . . . G 4 18.747 70.529 1.546 1 38.85 ? C16 P1A 5 E 1 
HETATM 20 C C22 P1A . . . G 4 18.054 73.441 2.175 1 31.73 ? C22 P1A 5 E 1 
HETATM 21 O O20 P1A . . . G 4 20.248 73.129 1.273 1 33.49 ? O20 P1A 5 E 1 
HETATM 22 C C21 P1A . . . G 4 20.12 73.624 3.669 1 35.65 ? C21 P1A 5 E 1 
HETATM 23 C C6 P1A . . . G 4 21.955 65.657 2.563 1 33.52 ? C6 P1A 5 E 1 
HETATM 24 C C7 P1A . . . G 4 21.097 66.795 2.3 1 28.45 ? C7 P1A 5 E 1 
HETATM 25 O O3 P1A . . . G 4 24.235 64.175 5.968 1 45.46 ? O3 P1A 5 E 1 
HETATM 26 O O2 P1A . . . G 4 24.588 66.48 7.635 1 40.73 ? O2 P1A 5 E 1 
HETATM 27 O O22 P1A . . . G 4 18.231 74.846 1.917 1 33.62 ? O22 P1A 5 E 1 
HETATM 28 C C23 P1A . . . G 4 16.966 73.306 3.3 1 27.45 ? C23 P1A 5 E 1 
HETATM 29 C C24 P1A . . . G 4 15.596 73.682 2.708 1 18.83 ? C24 P1A 5 E 1 
HETATM 30 C C25 P1A . . . G 4 14.375 73.327 3.427 1 28.22 ? C25 P1A 5 E 1 
HETATM 31 C C26 P1A . . . G 4 13.612 72.211 2.623 1 27.26 ? C26 P1A 5 E 1 
HETATM 32 C C27 P1A . . . G 4 13.497 74.515 3.656 1 25.97 ? C27 P1A 5 E 1 
HETATM 33 O O6 P1A . . . G 4 21.88 64.675 1.836 1 38.92 ? O6 P1A 5 E 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           33 
#