data_1Z6K # _model_server_result.job_id SgHoIO-WOd8xd7yPlm9JEQ _model_server_result.datetime_utc '2024-11-25 01:43:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z6k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":275}' # _entry.id 1Z6K # _exptl.entry_id 1Z6K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1Z6K _cell.length_a 91.28 _cell.length_b 91.28 _cell.length_c 219.263 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z6K _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 91.28 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 45.64 79.050799 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 21 A MSE 1 1_555 A N ASN 22 A ASN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C VAL 108 A VAL 88 1_555 A N MSE 109 A MSE 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C MSE 109 A MSE 89 1_555 A N LEU 110 A LEU 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C GLY 151 A GLY 131 1_555 A N MSE 152 A MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C MSE 152 A MSE 132 1_555 A N MSE 153 A MSE 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale6 A C MSE 153 A MSE 133 1_555 A N TRP 154 A TRP 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A OE1 GLU 132 A GLU 112 1_555 C MG MG . A MG 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc2 A OD2 ASP 158 A ASP 138 1_555 C MG MG . A MG 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc3 B O5 OAA . A OAA 274 1_555 C MG MG . A MG 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc4 B O3 OAA . A OAA 274 1_555 C MG MG . A MG 275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? metalc ? metalc5 C MG MG . A MG 275 1_555 D O HOH . A HOH 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1Z6K _atom_sites.fract_transf_matrix[1][1] 0.010955 _atom_sites.fract_transf_matrix[1][2] 0.006325 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OAA A 1 274 240 OAA OAA . C 3 MG A 1 275 241 MG MG2 . D 4 HOH A 1 276 1 HOH TIP . D 4 HOH A 2 277 2 HOH TIP . D 4 HOH A 3 278 3 HOH TIP . D 4 HOH A 4 279 4 HOH TIP . D 4 HOH A 5 280 5 HOH TIP . D 4 HOH A 6 281 7 HOH TIP . D 4 HOH A 7 282 8 HOH TIP . D 4 HOH A 8 283 9 HOH TIP . D 4 HOH A 9 284 10 HOH TIP . D 4 HOH A 10 285 11 HOH TIP . D 4 HOH A 11 286 12 HOH TIP . D 4 HOH A 12 287 13 HOH TIP . D 4 HOH A 13 288 14 HOH TIP . D 4 HOH A 14 289 15 HOH TIP . D 4 HOH A 15 290 16 HOH TIP . D 4 HOH A 16 291 17 HOH TIP . D 4 HOH A 17 292 18 HOH TIP . D 4 HOH A 18 293 19 HOH TIP . D 4 HOH A 19 294 20 HOH TIP . D 4 HOH A 20 295 21 HOH TIP . D 4 HOH A 21 296 22 HOH TIP . D 4 HOH A 22 297 23 HOH TIP . D 4 HOH A 23 298 24 HOH TIP . D 4 HOH A 24 299 25 HOH TIP . D 4 HOH A 25 300 26 HOH TIP . D 4 HOH A 26 301 27 HOH TIP . D 4 HOH A 27 302 28 HOH TIP . D 4 HOH A 28 303 29 HOH TIP . D 4 HOH A 29 304 30 HOH TIP . D 4 HOH A 30 305 31 HOH TIP . D 4 HOH A 31 306 32 HOH TIP . D 4 HOH A 32 307 33 HOH TIP . D 4 HOH A 33 308 34 HOH TIP . D 4 HOH A 34 309 35 HOH TIP . D 4 HOH A 35 310 36 HOH TIP . D 4 HOH A 36 311 37 HOH TIP . D 4 HOH A 37 312 38 HOH TIP . D 4 HOH A 38 313 39 HOH TIP . D 4 HOH A 39 314 40 HOH TIP . D 4 HOH A 40 315 41 HOH TIP . D 4 HOH A 41 316 42 HOH TIP . D 4 HOH A 42 317 43 HOH TIP . D 4 HOH A 43 318 44 HOH TIP . D 4 HOH A 44 319 45 HOH TIP . D 4 HOH A 45 320 46 HOH TIP . D 4 HOH A 46 321 47 HOH TIP . D 4 HOH A 47 322 48 HOH TIP . D 4 HOH A 48 323 49 HOH TIP . D 4 HOH A 49 324 51 HOH TIP . D 4 HOH A 50 325 52 HOH TIP . D 4 HOH A 51 326 53 HOH TIP . D 4 HOH A 52 327 54 HOH TIP . D 4 HOH A 53 328 55 HOH TIP . D 4 HOH A 54 329 56 HOH TIP . D 4 HOH A 55 330 57 HOH TIP . D 4 HOH A 56 331 58 HOH TIP . D 4 HOH A 57 332 59 HOH TIP . D 4 HOH A 58 333 60 HOH TIP . D 4 HOH A 59 334 61 HOH TIP . D 4 HOH A 60 335 62 HOH TIP . D 4 HOH A 61 336 64 HOH TIP . D 4 HOH A 62 337 65 HOH TIP . D 4 HOH A 63 338 66 HOH TIP . D 4 HOH A 64 339 67 HOH TIP . D 4 HOH A 65 340 68 HOH TIP . D 4 HOH A 66 341 69 HOH TIP . D 4 HOH A 67 342 70 HOH TIP . D 4 HOH A 68 343 71 HOH TIP . D 4 HOH A 69 344 72 HOH TIP . D 4 HOH A 70 345 73 HOH TIP . D 4 HOH A 71 346 74 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.163 _atom_site.Cartn_y 35.503 _atom_site.Cartn_z 18.377 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.97 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 275 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #