data_1Z6L # _model_server_result.job_id jYRw3Cqsol70pfv5NOWQAw _model_server_result.datetime_utc '2024-11-22 14:59:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z6l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 1Z6L # _exptl.entry_id 1Z6L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 215.379 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(6-AMINOHEXYL)HEXANE-1,6-DIAMINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z6L _cell.length_a 102.038 _cell.length_b 214.616 _cell.length_c 118.797 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z6L _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 221 A CYS 221 1_555 A SG CYS 238 A CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf2 B SG CYS 221 B CYS 221 1_555 B SG CYS 238 B CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? # _chem_comp.formula 'C12 H29 N3' _chem_comp.formula_weight 215.379 _chem_comp.id DRE _chem_comp.mon_nstd_flag . _chem_comp.name N-(6-AMINOHEXYL)HEXANE-1,6-DIAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BIS(HEXAMETHYLENE)TRIAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CAB DRE sing 83 n n NAA HAA1 DRE sing 84 n n NAA HAA2 DRE sing 85 n n CAB CAC DRE sing 86 n n CAB HAB1 DRE sing 87 n n CAB HAB2 DRE sing 88 n n CAC CAD DRE sing 89 n n CAC HAC1 DRE sing 90 n n CAC HAC2 DRE sing 91 n n CAD CAE DRE sing 92 n n CAD HAD1 DRE sing 93 n n CAD HAD2 DRE sing 94 n n CAE CAF DRE sing 95 n n CAE HAE1 DRE sing 96 n n CAE HAE2 DRE sing 97 n n CAF CAG DRE sing 98 n n CAF HAF1 DRE sing 99 n n CAF HAF2 DRE sing 100 n n CAG NAH DRE sing 101 n n CAG HAG1 DRE sing 102 n n CAG HAG2 DRE sing 103 n n NAH CAI DRE sing 104 n n NAH HAH DRE sing 105 n n CAI CAJ DRE sing 106 n n CAI HAI1 DRE sing 107 n n CAI HAI2 DRE sing 108 n n CAJ CAK DRE sing 109 n n CAJ HAJ1 DRE sing 110 n n CAJ HAJ2 DRE sing 111 n n CAK CAL DRE sing 112 n n CAK HAK1 DRE sing 113 n n CAK HAK2 DRE sing 114 n n CAL CAM DRE sing 115 n n CAL HAL1 DRE sing 116 n n CAL HAL2 DRE sing 117 n n CAM CAN DRE sing 118 n n CAM HAM1 DRE sing 119 n n CAM HAM2 DRE sing 120 n n CAN NAO DRE sing 121 n n CAN HAN1 DRE sing 122 n n CAN HAN2 DRE sing 123 n n NAO HAO1 DRE sing 124 n n NAO HAO2 DRE sing 125 n n # _atom_sites.entry_id 1Z6L _atom_sites.fract_transf_matrix[1][1] 0.0098 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004659 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008418 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 803 803 FAD FAD . D 3 DRE A 1 804 1 DRE DRG . E 2 FAD B 1 804 804 FAD FAD . F 3 DRE B 1 601 1 DRE DRG . G 4 HOH A 1 805 1 HOH TIP . G 4 HOH A 2 806 3 HOH TIP . G 4 HOH A 3 807 6 HOH TIP . G 4 HOH A 4 808 8 HOH TIP . G 4 HOH A 5 809 9 HOH TIP . G 4 HOH A 6 810 10 HOH TIP . G 4 HOH A 7 811 11 HOH TIP . G 4 HOH A 8 812 12 HOH TIP . G 4 HOH A 9 813 16 HOH TIP . G 4 HOH A 10 814 17 HOH TIP . G 4 HOH A 11 815 18 HOH TIP . G 4 HOH A 12 816 19 HOH TIP . G 4 HOH A 13 817 21 HOH TIP . G 4 HOH A 14 818 22 HOH TIP . G 4 HOH A 15 819 25 HOH TIP . G 4 HOH A 16 820 30 HOH TIP . G 4 HOH A 17 821 31 HOH TIP . G 4 HOH A 18 822 34 HOH TIP . G 4 HOH A 19 823 35 HOH TIP . G 4 HOH A 20 824 36 HOH TIP . G 4 HOH A 21 825 37 HOH TIP . G 4 HOH A 22 826 38 HOH TIP . G 4 HOH A 23 827 39 HOH TIP . G 4 HOH A 24 828 40 HOH TIP . G 4 HOH A 25 829 41 HOH TIP . G 4 HOH A 26 830 42 HOH TIP . G 4 HOH A 27 831 43 HOH TIP . G 4 HOH A 28 832 44 HOH TIP . G 4 HOH A 29 833 45 HOH TIP . G 4 HOH A 30 834 47 HOH TIP . G 4 HOH A 31 835 48 HOH TIP . G 4 HOH A 32 836 52 HOH TIP . G 4 HOH A 33 837 137 HOH TIP . G 4 HOH A 34 838 120 HOH TIP . G 4 HOH A 35 839 159 HOH TIP . G 4 HOH A 36 840 134 HOH TIP . G 4 HOH A 37 841 165 HOH TIP . G 4 HOH A 38 842 178 HOH TIP . G 4 HOH A 39 843 174 HOH TIP . G 4 HOH A 40 844 266 HOH TIP . G 4 HOH A 41 845 213 HOH TIP . G 4 HOH A 42 846 273 HOH TIP . G 4 HOH A 43 847 293 HOH TIP . G 4 HOH A 44 848 229 HOH TIP . G 4 HOH A 45 849 380 HOH TIP . G 4 HOH A 46 850 329 HOH TIP . G 4 HOH A 47 851 388 HOH TIP . G 4 HOH A 48 852 323 HOH TIP . G 4 HOH A 49 853 321 HOH TIP . G 4 HOH A 50 854 431 HOH TIP . G 4 HOH A 51 855 449 HOH TIP . G 4 HOH A 52 856 467 HOH TIP . G 4 HOH A 53 857 567 HOH TIP . G 4 HOH A 54 858 509 HOH TIP . G 4 HOH A 55 859 504 HOH TIP . G 4 HOH A 56 860 555 HOH TIP . G 4 HOH A 57 861 518 HOH TIP . G 4 HOH A 58 862 519 HOH TIP . G 4 HOH A 59 863 533 HOH TIP . G 4 HOH A 60 864 516 HOH TIP . G 4 HOH A 61 865 529 HOH TIP . G 4 HOH A 62 866 544 HOH TIP . G 4 HOH A 63 867 565 HOH TIP . G 4 HOH A 64 868 542 HOH TIP . G 4 HOH A 65 869 549 HOH TIP . G 4 HOH A 66 870 553 HOH TIP . G 4 HOH A 67 871 589 HOH TIP . G 4 HOH A 68 872 574 HOH TIP . G 4 HOH A 69 873 609 HOH TIP . G 4 HOH A 70 874 620 HOH TIP . G 4 HOH A 71 875 764 HOH TIP . G 4 HOH A 72 876 755 HOH TIP . G 4 HOH A 73 877 883 HOH TIP . G 4 HOH A 74 878 884 HOH TIP . G 4 HOH A 75 879 896 HOH TIP . G 4 HOH A 76 880 894 HOH TIP . G 4 HOH A 77 881 892 HOH TIP . G 4 HOH A 78 882 999 HOH TIP . G 4 HOH A 79 883 1007 HOH TIP . G 4 HOH A 80 884 984 HOH TIP . G 4 HOH A 81 885 948 HOH TIP . G 4 HOH A 82 886 947 HOH TIP . G 4 HOH A 83 887 943 HOH TIP . G 4 HOH A 84 888 972 HOH TIP . G 4 HOH A 85 889 931 HOH TIP . G 4 HOH A 86 890 918 HOH TIP . G 4 HOH A 87 891 907 HOH TIP . G 4 HOH A 88 892 968 HOH TIP . H 4 HOH B 1 805 2 HOH TIP . H 4 HOH B 2 806 4 HOH TIP . H 4 HOH B 3 807 5 HOH TIP . H 4 HOH B 4 808 7 HOH TIP . H 4 HOH B 5 809 13 HOH TIP . H 4 HOH B 6 810 14 HOH TIP . H 4 HOH B 7 811 15 HOH TIP . H 4 HOH B 8 812 20 HOH TIP . H 4 HOH B 9 813 23 HOH TIP . H 4 HOH B 10 814 24 HOH TIP . H 4 HOH B 11 815 26 HOH TIP . H 4 HOH B 12 816 27 HOH TIP . H 4 HOH B 13 817 28 HOH TIP . H 4 HOH B 14 818 29 HOH TIP . H 4 HOH B 15 819 32 HOH TIP . H 4 HOH B 16 820 33 HOH TIP . H 4 HOH B 17 821 46 HOH TIP . H 4 HOH B 18 822 86 HOH TIP . H 4 HOH B 19 823 97 HOH TIP . H 4 HOH B 20 824 99 HOH TIP . H 4 HOH B 21 825 143 HOH TIP . H 4 HOH B 22 826 240 HOH TIP . H 4 HOH B 23 827 288 HOH TIP . H 4 HOH B 24 828 364 HOH TIP . H 4 HOH B 25 829 345 HOH TIP . H 4 HOH B 26 830 489 HOH TIP . H 4 HOH B 27 831 438 HOH TIP . H 4 HOH B 28 832 447 HOH TIP . H 4 HOH B 29 833 462 HOH TIP . H 4 HOH B 30 834 474 HOH TIP . H 4 HOH B 31 835 629 HOH TIP . H 4 HOH B 32 836 634 HOH TIP . H 4 HOH B 33 837 688 HOH TIP . H 4 HOH B 34 838 714 HOH TIP . H 4 HOH B 35 839 798 HOH TIP . H 4 HOH B 36 840 796 HOH TIP . H 4 HOH B 37 841 701 HOH TIP . H 4 HOH B 38 842 786 HOH TIP . H 4 HOH B 39 843 722 HOH TIP . H 4 HOH B 40 844 772 HOH TIP . H 4 HOH B 41 845 800 HOH TIP . H 4 HOH B 42 846 816 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAA DRE . . . F 3 49.381 -54.16 -6.32 1 71.73 ? NAA DRE 601 B 1 HETATM 2 C CAB DRE . . . F 3 49.867 -55.468 -5.858 1 71.8 ? CAB DRE 601 B 1 HETATM 3 C CAC DRE . . . F 3 51.327 -55.647 -6.277 1 72.43 ? CAC DRE 601 B 1 HETATM 4 C CAD DRE . . . F 3 51.896 -56.971 -5.762 1 72.59 ? CAD DRE 601 B 1 HETATM 5 C CAE DRE . . . F 3 53.345 -57.147 -6.222 1 71.87 ? CAE DRE 601 B 1 HETATM 6 C CAF DRE . . . F 3 53.984 -58.437 -5.701 1 72.9 ? CAF DRE 601 B 1 HETATM 7 C CAG DRE . . . F 3 54.148 -58.436 -4.179 1 74.1 ? CAG DRE 601 B 1 HETATM 8 N NAH DRE . . . F 3 54.863 -57.224 -3.753 1 76.09 ? NAH DRE 601 B 1 HETATM 9 C CAI DRE . . . F 3 55.296 -57.346 -2.354 1 77.17 ? CAI DRE 601 B 1 HETATM 10 C CAJ DRE . . . F 3 55.383 -55.948 -1.736 1 79.06 ? CAJ DRE 601 B 1 HETATM 11 C CAK DRE . . . F 3 55.981 -55.975 -0.328 1 81.41 ? CAK DRE 601 B 1 HETATM 12 C CAL DRE . . . F 3 57.497 -56.191 -0.355 1 82.24 ? CAL DRE 601 B 1 HETATM 13 C CAM DRE . . . F 3 58.081 -56.329 1.053 1 81.26 ? CAM DRE 601 B 1 HETATM 14 C CAN DRE . . . F 3 57.609 -57.621 1.723 1 83.15 ? CAN DRE 601 B 1 HETATM 15 N NAO DRE . . . F 3 58.202 -57.732 3.064 1 83.09 ? NAO DRE 601 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #