data_1Z73 # _model_server_result.job_id aZcx42Fe3R7cdVnjM-DDIg _model_server_result.datetime_utc '2024-10-15 11:23:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":661}' # _entry.id 1Z73 # _exptl.entry_id 1Z73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z73 _cell.length_a 150.351 _cell.length_b 150.351 _cell.length_c 150.351 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z73 _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_456 z-1/2,-x+1/2,-y+1 0 0 1 -1 0 0 0 -1 0 -75.1755 75.1755 150.351 3 'crystal symmetry operation' 12_565 -y+1/2,-z+1,x+1/2 0 -1 0 0 0 -1 1 0 0 75.1755 150.351 75.1755 4 'crystal symmetry operation' 13_456 y-1/4,x+1/4,-z+5/4 0 1 0 1 0 0 0 0 -1 -37.58775 37.58775 187.93875 5 'crystal symmetry operation' 18_545 -x+1/4,z-1/4,y+1/4 -1 0 0 0 0 1 0 1 0 37.58775 -37.58775 37.58775 6 'crystal symmetry operation' 24_555 -z+3/4,-y+3/4,-x+3/4 0 0 -1 0 -1 0 -1 0 0 112.76325 112.76325 112.76325 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 1Z73 _atom_sites.fract_transf_matrix[1][1] 0.006651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006651 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 301 301 SO4 SO4 . C 2 SO4 A 1 302 302 SO4 SO4 . D 3 GOL A 1 661 303 GOL GOL . E 4 HOH A 1 1 1 HOH HOH . E 4 HOH A 2 2 2 HOH HOH . E 4 HOH A 3 3 3 HOH HOH . E 4 HOH A 4 4 4 HOH HOH . E 4 HOH A 5 5 5 HOH HOH . E 4 HOH A 6 6 6 HOH HOH . E 4 HOH A 7 7 7 HOH HOH . E 4 HOH A 8 8 8 HOH HOH . E 4 HOH A 9 9 9 HOH HOH . E 4 HOH A 10 10 10 HOH HOH . E 4 HOH A 11 11 11 HOH HOH . E 4 HOH A 12 12 12 HOH HOH . E 4 HOH A 13 13 13 HOH HOH . E 4 HOH A 14 14 14 HOH HOH . E 4 HOH A 15 15 15 HOH HOH . E 4 HOH A 16 16 16 HOH HOH . E 4 HOH A 17 17 17 HOH HOH . E 4 HOH A 18 18 18 HOH HOH . E 4 HOH A 19 19 19 HOH HOH . E 4 HOH A 20 20 20 HOH HOH . E 4 HOH A 21 21 21 HOH HOH . E 4 HOH A 22 22 22 HOH HOH . E 4 HOH A 23 23 23 HOH HOH . E 4 HOH A 24 24 24 HOH HOH . E 4 HOH A 25 25 25 HOH HOH . E 4 HOH A 26 26 26 HOH HOH . E 4 HOH A 27 27 27 HOH HOH . E 4 HOH A 28 28 28 HOH HOH . E 4 HOH A 29 29 29 HOH HOH . E 4 HOH A 30 30 30 HOH HOH . E 4 HOH A 31 31 31 HOH HOH . E 4 HOH A 32 32 32 HOH HOH . E 4 HOH A 33 33 33 HOH HOH . E 4 HOH A 34 34 34 HOH HOH . E 4 HOH A 35 35 35 HOH HOH . E 4 HOH A 36 36 36 HOH HOH . E 4 HOH A 37 37 37 HOH HOH . E 4 HOH A 38 38 38 HOH HOH . E 4 HOH A 39 39 39 HOH HOH . E 4 HOH A 40 40 40 HOH HOH . E 4 HOH A 41 41 41 HOH HOH . E 4 HOH A 42 42 42 HOH HOH . E 4 HOH A 43 43 43 HOH HOH . E 4 HOH A 44 44 44 HOH HOH . E 4 HOH A 45 45 45 HOH HOH . E 4 HOH A 46 46 46 HOH HOH . E 4 HOH A 47 47 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 46.608 46.037 99.211 1 56.8 ? C1 GOL 661 A 1 HETATM 2 O O1 GOL . . . D 3 46.584 47.659 99.057 1 56.19 ? O1 GOL 661 A 1 HETATM 3 C C2 GOL . . . D 3 47.692 45.291 99.689 1 53.56 ? C2 GOL 661 A 1 HETATM 4 O O2 GOL . . . D 3 48.826 45.734 99.143 1 56.21 ? O2 GOL 661 A 1 HETATM 5 C C3 GOL . . . D 3 47.335 44.435 100.491 1 53.5 ? C3 GOL 661 A 1 HETATM 6 O O3 GOL . . . D 3 46.433 43.538 101.425 1 49.21 ? O3 GOL 661 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #