data_1Z7J # _model_server_result.job_id PTrLan_WTJkjTtHe40yXDw _model_server_result.datetime_utc '2024-12-05 18:36:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z7j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":129}' # _entry.id 1Z7J # _exptl.entry_id 1Z7J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 747.829 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,3',5,5'-TETRAIODOTHYROACETIC ACID" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z7J _cell.length_a 43.462 _cell.length_b 85.858 _cell.length_c 65.443 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z7J _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 43.462 85.858 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H8 I4 O4' _chem_comp.formula_weight 747.829 _chem_comp.id T4A _chem_comp.mon_nstd_flag . _chem_comp.name "3,3',5,5'-TETRAIODOTHYROACETIC ACID" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 T4A doub 271 n y C1 C6 T4A sing 272 n y C1 C7 T4A sing 273 n n C2 C3 T4A sing 274 n y C2 H21 T4A sing 275 n n C3 C4 T4A doub 276 n y C3 I3 T4A sing 277 n n C4 C5 T4A sing 278 n y C4 O4 T4A sing 279 n n C5 C6 T4A doub 280 n y C5 I5 T4A sing 281 n n C6 H61 T4A sing 282 n n C7 C8 T4A sing 283 n n C7 H71 T4A sing 284 n n C7 H72 T4A sing 285 n n C8 O8 T4A doub 286 n n C8 O9 T4A sing 287 n n C1' C6' T4A doub 288 n y C1' C2' T4A sing 289 n y C1' O4 T4A sing 290 n n C6' C5' T4A sing 291 n y C6' "H6'1" T4A sing 292 n n C5' C4' T4A doub 293 n y C5' I5' T4A sing 294 n n C4' C3' T4A sing 295 n y C4' O4' T4A sing 296 n n C3' C2' T4A doub 297 n y C3' I3' T4A sing 298 n n C2' "H2'1" T4A sing 299 n n O9 HO91 T4A sing 300 n n O4' "H4'O" T4A sing 301 n n # _atom_sites.entry_id 1Z7J _atom_sites.fract_transf_matrix[1][1] 0.023009 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T4A A 1 128 128 T4A T4A . D 2 T4A B 1 129 129 T4A T4A . E 3 HOH A 1 850 850 HOH HOH . E 3 HOH A 2 851 851 HOH HOH . E 3 HOH A 3 852 852 HOH HOH . E 3 HOH A 4 855 855 HOH HOH . E 3 HOH A 5 856 856 HOH HOH . E 3 HOH A 6 857 857 HOH HOH . E 3 HOH A 7 859 859 HOH HOH . E 3 HOH A 8 860 860 HOH HOH . E 3 HOH A 9 863 863 HOH HOH . E 3 HOH A 10 864 864 HOH HOH . E 3 HOH A 11 865 865 HOH HOH . E 3 HOH A 12 866 866 HOH HOH . E 3 HOH A 13 868 868 HOH HOH . E 3 HOH A 14 871 871 HOH HOH . E 3 HOH A 15 872 872 HOH HOH . E 3 HOH A 16 873 873 HOH HOH . E 3 HOH A 17 878 878 HOH HOH . E 3 HOH A 18 879 879 HOH HOH . E 3 HOH A 19 880 880 HOH HOH . E 3 HOH A 20 881 881 HOH HOH . E 3 HOH A 21 882 882 HOH HOH . E 3 HOH A 22 885 885 HOH HOH . E 3 HOH A 23 886 886 HOH HOH . E 3 HOH A 24 887 887 HOH HOH . E 3 HOH A 25 888 888 HOH HOH . E 3 HOH A 26 889 889 HOH HOH . E 3 HOH A 27 893 893 HOH HOH . E 3 HOH A 28 895 895 HOH HOH . E 3 HOH A 29 897 897 HOH HOH . E 3 HOH A 30 900 900 HOH HOH . E 3 HOH A 31 901 901 HOH HOH . E 3 HOH A 32 905 905 HOH HOH . E 3 HOH A 33 906 906 HOH HOH . E 3 HOH A 34 907 907 HOH HOH . E 3 HOH A 35 910 910 HOH HOH . E 3 HOH A 36 912 912 HOH HOH . E 3 HOH A 37 914 914 HOH HOH . E 3 HOH A 38 915 915 HOH HOH . E 3 HOH A 39 916 916 HOH HOH . E 3 HOH A 40 922 922 HOH HOH . E 3 HOH A 41 924 924 HOH HOH . E 3 HOH A 42 925 925 HOH HOH . E 3 HOH A 43 926 926 HOH HOH . E 3 HOH A 44 927 927 HOH HOH . E 3 HOH A 45 928 928 HOH HOH . E 3 HOH A 46 929 929 HOH HOH . E 3 HOH A 47 934 934 HOH HOH . E 3 HOH A 48 935 935 HOH HOH . E 3 HOH A 49 939 939 HOH HOH . F 3 HOH B 1 853 853 HOH HOH . F 3 HOH B 2 854 854 HOH HOH . F 3 HOH B 3 858 858 HOH HOH . F 3 HOH B 4 861 861 HOH HOH . F 3 HOH B 5 862 862 HOH HOH . F 3 HOH B 6 867 867 HOH HOH . F 3 HOH B 7 869 869 HOH HOH . F 3 HOH B 8 870 870 HOH HOH . F 3 HOH B 9 874 874 HOH HOH . F 3 HOH B 10 875 875 HOH HOH . F 3 HOH B 11 876 876 HOH HOH . F 3 HOH B 12 877 877 HOH HOH . F 3 HOH B 13 884 884 HOH HOH . F 3 HOH B 14 890 890 HOH HOH . F 3 HOH B 15 891 891 HOH HOH . F 3 HOH B 16 892 892 HOH HOH . F 3 HOH B 17 894 894 HOH HOH . F 3 HOH B 18 896 896 HOH HOH . F 3 HOH B 19 898 898 HOH HOH . F 3 HOH B 20 899 899 HOH HOH . F 3 HOH B 21 902 902 HOH HOH . F 3 HOH B 22 903 903 HOH HOH . F 3 HOH B 23 904 904 HOH HOH . F 3 HOH B 24 908 908 HOH HOH . F 3 HOH B 25 909 909 HOH HOH . F 3 HOH B 26 911 911 HOH HOH . F 3 HOH B 27 913 913 HOH HOH . F 3 HOH B 28 917 917 HOH HOH . F 3 HOH B 29 918 918 HOH HOH . F 3 HOH B 30 919 919 HOH HOH . F 3 HOH B 31 920 920 HOH HOH . F 3 HOH B 32 921 921 HOH HOH . F 3 HOH B 33 923 923 HOH HOH . F 3 HOH B 34 931 931 HOH HOH . F 3 HOH B 35 932 932 HOH HOH . F 3 HOH B 36 937 937 HOH HOH . F 3 HOH B 37 938 938 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T4A . A . D 2 21.256 44.47 22.354 0.2 25.68 ? C1 T4A 129 B 1 HETATM 2 C C1 T4A . B . D 2 22.204 43.987 31.397 0.17 36.33 ? C1 T4A 129 B 1 HETATM 3 C C2 T4A . A . D 2 20.769 43.203 22.533 0.2 25.45 ? C2 T4A 129 B 1 HETATM 4 C C2 T4A . B . D 2 21.329 44.617 30.542 0.17 36.56 ? C2 T4A 129 B 1 HETATM 5 C C3 T4A . A . D 2 21.216 42.449 23.638 0.2 25.65 ? C3 T4A 129 B 1 HETATM 6 C C3 T4A . B . D 2 20.958 43.969 29.33 0.17 36.45 ? C3 T4A 129 B 1 HETATM 7 C C4 T4A . A . D 2 22.122 42.959 24.53 0.2 25.66 ? C4 T4A 129 B 1 HETATM 8 C C4 T4A . B . D 2 21.456 42.735 28.993 0.17 36.1 ? C4 T4A 129 B 1 HETATM 9 C C5 T4A . A . D 2 22.591 44.229 24.334 0.2 26.08 ? C5 T4A 129 B 1 HETATM 10 C C5 T4A . B . D 2 22.339 42.131 29.856 0.17 36.37 ? C5 T4A 129 B 1 HETATM 11 C C6 T4A . A . D 2 22.163 45.01 23.231 0.2 25.95 ? C6 T4A 129 B 1 HETATM 12 C C6 T4A . B . D 2 22.726 42.75 31.08 0.17 36.51 ? C6 T4A 129 B 1 HETATM 13 C C7 T4A . A . D 2 20.833 45.252 21.137 0.2 25.36 ? C7 T4A 129 B 1 HETATM 14 C C7 T4A . B . D 2 22.53 44.627 32.747 0.17 36.03 ? C7 T4A 129 B 1 HETATM 15 C C8 T4A . A . D 2 20.745 44.507 19.971 0.2 26.11 ? C8 T4A 129 B 1 HETATM 16 C C8 T4A . B . D 2 22.06 43.953 33.882 0.17 35.69 ? C8 T4A 129 B 1 HETATM 17 C C1' T4A . A . D 2 22.204 42.451 26.925 0.2 26.73 ? C1' T4A 129 B 1 HETATM 18 C C1' T4A . B . D 2 21.648 42.299 26.57 0.17 34.57 ? C1' T4A 129 B 1 HETATM 19 C C6' T4A . A . D 2 21.199 43.393 27.249 0.2 27.26 ? C6' T4A 129 B 1 HETATM 20 C C6' T4A . B . D 2 22.535 43.358 26.362 0.17 34.09 ? C6' T4A 129 B 1 HETATM 21 C C5' T4A . A . D 2 20.892 43.562 28.658 0.2 27.67 ? C5' T4A 129 B 1 HETATM 22 C C5' T4A . B . D 2 23.085 43.491 25.038 0.17 33.72 ? C5' T4A 129 B 1 HETATM 23 C C4' T4A . A . D 2 21.543 42.852 29.66 0.2 27.96 ? C4' T4A 129 B 1 HETATM 24 C C4' T4A . B . D 2 22.774 42.632 23.995 0.17 33.65 ? C4' T4A 129 B 1 HETATM 25 C C3' T4A . A . D 2 22.518 41.954 29.272 0.2 28.06 ? C3' T4A 129 B 1 HETATM 26 C C3' T4A . B . D 2 21.904 41.615 24.247 0.17 33.9 ? C3' T4A 129 B 1 HETATM 27 C C2' T4A . A . D 2 22.865 41.738 27.928 0.2 27.34 ? C2' T4A 129 B 1 HETATM 28 C C2' T4A . B . D 2 21.319 41.417 25.518 0.17 34.26 ? C2' T4A 129 B 1 HETATM 29 I I3 T4A . A . D 2 20.455 40.508 23.861 0.2 24.99 ? I3 T4A 129 B 1 HETATM 30 I I3 T4A . B . D 2 19.618 44.961 28.074 0.17 37.64 ? I3 T4A 129 B 1 HETATM 31 I I5 T4A . A . D 2 23.982 45.068 25.643 0.2 26.59 ? I5 T4A 129 B 1 HETATM 32 I I5 T4A . B . D 2 23.148 40.25 29.414 0.17 37.3 ? I5 T4A 129 B 1 HETATM 33 I I5' T4A . A . D 2 19.416 44.946 29.213 0.2 30.12 ? I5' T4A 129 B 1 HETATM 34 I I5' T4A . B . D 2 24.412 45.053 24.675 0.17 33.2 ? I5' T4A 129 B 1 HETATM 35 I I3' T4A . A . D 2 23.566 40.843 30.704 0.2 30.66 ? I3' T4A 129 B 1 HETATM 36 I I3' T4A . B . D 2 21.401 40.286 22.699 0.17 32.35 ? I3' T4A 129 B 1 HETATM 37 O O8 T4A . A . D 2 21.36 43.402 19.893 0.2 25.82 ? O8 T4A 129 B 1 HETATM 38 O O8 T4A . B . D 2 20.841 44.053 34.204 0.17 35.7 ? O8 T4A 129 B 1 HETATM 39 O O9 T4A . A . D 2 20.058 44.944 19.011 0.2 26.36 ? O9 T4A 129 B 1 HETATM 40 O O9 T4A . B . D 2 22.864 43.263 34.569 0.17 35.85 ? O9 T4A 129 B 1 HETATM 41 O O4 T4A . A . D 2 22.569 42.188 25.597 0.2 26.08 ? O4 T4A 129 B 1 HETATM 42 O O4 T4A . B . D 2 21.047 42.089 27.815 0.17 35.54 ? O4 T4A 129 B 1 HETATM 43 O O4' T4A . A . D 2 21.221 43.034 30.995 0.2 27.6 ? O4' T4A 129 B 1 HETATM 44 O O4' T4A . B . D 2 23.32 42.794 22.75 0.17 34.17 ? O4' T4A 129 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #