data_1Z8O # _model_server_result.job_id NxboBYeiqJDr6WO-3ck6yA _model_server_result.datetime_utc '2024-11-22 19:27:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z8o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":417}' # _entry.id 1Z8O # _exptl.entry_id 1Z8O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN MOLECULE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z8O _cell.length_a 53.9 _cell.length_b 78.64 _cell.length_c 97.21 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z8O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 351 A CYS 351 1_555 B FE HEM . A HEM 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc2 B FE HEM . A HEM 410 1_555 C O1 OXY . A OXY 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc3 B FE HEM . A HEM 410 1_555 C O2 OXY . A OXY 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.816 ? # _chem_comp.formula O2 _chem_comp.formula_weight 31.999 _chem_comp.id OXY _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id OXY _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 384 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 1Z8O _atom_sites.fract_transf_matrix[1][1] 0.018553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012716 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 410 410 HEM HEM . C 3 OXY A 1 417 417 OXY O2 . D 4 DEB A 1 420 420 DEB DEB . E 5 HOH A 1 421 1 HOH HOH . E 5 HOH A 2 422 2 HOH HOH . E 5 HOH A 3 423 3 HOH HOH . E 5 HOH A 4 424 4 HOH HOH . E 5 HOH A 5 425 5 HOH HOH . E 5 HOH A 6 426 6 HOH HOH . E 5 HOH A 7 427 7 HOH HOH . E 5 HOH A 8 428 8 HOH HOH . E 5 HOH A 9 429 9 HOH HOH . E 5 HOH A 10 430 10 HOH HOH . E 5 HOH A 11 431 11 HOH HOH . E 5 HOH A 12 432 12 HOH HOH . E 5 HOH A 13 433 13 HOH HOH . E 5 HOH A 14 434 14 HOH HOH . E 5 HOH A 15 435 15 HOH HOH . E 5 HOH A 16 436 16 HOH HOH . E 5 HOH A 17 437 17 HOH HOH . E 5 HOH A 18 438 18 HOH HOH . E 5 HOH A 19 439 19 HOH HOH . E 5 HOH A 20 440 20 HOH HOH . E 5 HOH A 21 441 21 HOH HOH . E 5 HOH A 22 442 22 HOH HOH . E 5 HOH A 23 443 23 HOH HOH . E 5 HOH A 24 444 24 HOH HOH . E 5 HOH A 25 445 25 HOH HOH . E 5 HOH A 26 446 26 HOH HOH . E 5 HOH A 27 447 27 HOH HOH . E 5 HOH A 28 448 28 HOH HOH . E 5 HOH A 29 449 29 HOH HOH . E 5 HOH A 30 450 30 HOH HOH . E 5 HOH A 31 451 31 HOH HOH . E 5 HOH A 32 452 32 HOH HOH . E 5 HOH A 33 453 33 HOH HOH . E 5 HOH A 34 454 34 HOH HOH . E 5 HOH A 35 455 35 HOH HOH . E 5 HOH A 36 456 36 HOH HOH . E 5 HOH A 37 457 37 HOH HOH . E 5 HOH A 38 458 38 HOH HOH . E 5 HOH A 39 459 39 HOH HOH . E 5 HOH A 40 460 40 HOH HOH . E 5 HOH A 41 461 41 HOH HOH . E 5 HOH A 42 462 42 HOH HOH . E 5 HOH A 43 463 43 HOH HOH . E 5 HOH A 44 464 44 HOH HOH . E 5 HOH A 45 465 45 HOH HOH . E 5 HOH A 46 466 46 HOH HOH . E 5 HOH A 47 467 47 HOH HOH . E 5 HOH A 48 468 48 HOH HOH . E 5 HOH A 49 469 49 HOH HOH . E 5 HOH A 50 470 50 HOH HOH . E 5 HOH A 51 471 51 HOH HOH . E 5 HOH A 52 472 52 HOH HOH . E 5 HOH A 53 473 53 HOH HOH . E 5 HOH A 54 474 54 HOH HOH . E 5 HOH A 55 475 55 HOH HOH . E 5 HOH A 56 476 56 HOH HOH . E 5 HOH A 57 477 57 HOH HOH . E 5 HOH A 58 478 58 HOH HOH . E 5 HOH A 59 479 59 HOH HOH . E 5 HOH A 60 480 60 HOH HOH . E 5 HOH A 61 481 61 HOH HOH . E 5 HOH A 62 482 62 HOH HOH . E 5 HOH A 63 483 63 HOH HOH . E 5 HOH A 64 484 64 HOH HOH . E 5 HOH A 65 485 65 HOH HOH . E 5 HOH A 66 486 66 HOH HOH . E 5 HOH A 67 487 67 HOH HOH . E 5 HOH A 68 488 68 HOH HOH . E 5 HOH A 69 489 69 HOH HOH . E 5 HOH A 70 490 70 HOH HOH . E 5 HOH A 71 491 71 HOH HOH . E 5 HOH A 72 492 72 HOH HOH . E 5 HOH A 73 493 73 HOH HOH . E 5 HOH A 74 494 74 HOH HOH . E 5 HOH A 75 495 75 HOH HOH . E 5 HOH A 76 496 76 HOH HOH . E 5 HOH A 77 497 77 HOH HOH . E 5 HOH A 78 498 78 HOH HOH . E 5 HOH A 79 499 79 HOH HOH . E 5 HOH A 80 500 80 HOH HOH . E 5 HOH A 81 501 81 HOH HOH . E 5 HOH A 82 502 82 HOH HOH . E 5 HOH A 83 503 83 HOH HOH . E 5 HOH A 84 504 84 HOH HOH . E 5 HOH A 85 505 85 HOH HOH . E 5 HOH A 86 506 86 HOH HOH . E 5 HOH A 87 507 87 HOH HOH . E 5 HOH A 88 508 88 HOH HOH . E 5 HOH A 89 509 89 HOH HOH . E 5 HOH A 90 510 90 HOH HOH . E 5 HOH A 91 511 91 HOH HOH . E 5 HOH A 92 512 92 HOH HOH . E 5 HOH A 93 513 93 HOH HOH . E 5 HOH A 94 514 94 HOH HOH . E 5 HOH A 95 515 95 HOH HOH . E 5 HOH A 96 516 96 HOH HOH . E 5 HOH A 97 517 97 HOH HOH . E 5 HOH A 98 518 98 HOH HOH . E 5 HOH A 99 519 99 HOH HOH . E 5 HOH A 100 520 100 HOH HOH . E 5 HOH A 101 521 101 HOH HOH . E 5 HOH A 102 522 102 HOH HOH . E 5 HOH A 103 523 103 HOH HOH . E 5 HOH A 104 524 104 HOH HOH . E 5 HOH A 105 525 105 HOH HOH . E 5 HOH A 106 526 106 HOH HOH . E 5 HOH A 107 527 107 HOH HOH . E 5 HOH A 108 528 108 HOH HOH . E 5 HOH A 109 529 109 HOH HOH . E 5 HOH A 110 530 110 HOH HOH . E 5 HOH A 111 531 111 HOH HOH . E 5 HOH A 112 532 112 HOH HOH . E 5 HOH A 113 533 113 HOH HOH . E 5 HOH A 114 534 114 HOH HOH . E 5 HOH A 115 535 115 HOH HOH . E 5 HOH A 116 536 116 HOH HOH . E 5 HOH A 117 537 117 HOH HOH . E 5 HOH A 118 538 118 HOH HOH . E 5 HOH A 119 539 119 HOH HOH . E 5 HOH A 120 540 120 HOH HOH . E 5 HOH A 121 541 121 HOH HOH . E 5 HOH A 122 542 122 HOH HOH . E 5 HOH A 123 543 123 HOH HOH . E 5 HOH A 124 544 124 HOH HOH . E 5 HOH A 125 545 125 HOH HOH . E 5 HOH A 126 546 126 HOH HOH . E 5 HOH A 127 547 127 HOH HOH . E 5 HOH A 128 548 128 HOH HOH . E 5 HOH A 129 549 129 HOH HOH . E 5 HOH A 130 550 130 HOH HOH . E 5 HOH A 131 551 131 HOH HOH . E 5 HOH A 132 552 132 HOH HOH . E 5 HOH A 133 553 133 HOH HOH . E 5 HOH A 134 554 134 HOH HOH . E 5 HOH A 135 555 135 HOH HOH . E 5 HOH A 136 556 136 HOH HOH . E 5 HOH A 137 557 137 HOH HOH . E 5 HOH A 138 558 138 HOH HOH . E 5 HOH A 139 559 139 HOH HOH . E 5 HOH A 140 560 140 HOH HOH . E 5 HOH A 141 561 141 HOH HOH . E 5 HOH A 142 562 142 HOH HOH . E 5 HOH A 143 563 143 HOH HOH . E 5 HOH A 144 564 144 HOH HOH . E 5 HOH A 145 565 145 HOH HOH . E 5 HOH A 146 566 146 HOH HOH . E 5 HOH A 147 567 147 HOH HOH . E 5 HOH A 148 568 148 HOH HOH . E 5 HOH A 149 569 149 HOH HOH . E 5 HOH A 150 570 150 HOH HOH . E 5 HOH A 151 571 151 HOH HOH . E 5 HOH A 152 572 152 HOH HOH . E 5 HOH A 153 573 153 HOH HOH . E 5 HOH A 154 574 154 HOH HOH . E 5 HOH A 155 575 155 HOH HOH . E 5 HOH A 156 576 156 HOH HOH . E 5 HOH A 157 577 157 HOH HOH . E 5 HOH A 158 578 158 HOH HOH . E 5 HOH A 159 579 159 HOH HOH . E 5 HOH A 160 580 160 HOH HOH . E 5 HOH A 161 581 161 HOH HOH . E 5 HOH A 162 582 162 HOH HOH . E 5 HOH A 163 583 163 HOH HOH . E 5 HOH A 164 584 164 HOH HOH . E 5 HOH A 165 585 165 HOH HOH . E 5 HOH A 166 586 166 HOH HOH . E 5 HOH A 167 587 167 HOH HOH . E 5 HOH A 168 588 168 HOH HOH . E 5 HOH A 169 589 169 HOH HOH . E 5 HOH A 170 590 170 HOH HOH . E 5 HOH A 171 591 171 HOH HOH . E 5 HOH A 172 592 172 HOH HOH . E 5 HOH A 173 593 173 HOH HOH . E 5 HOH A 174 594 174 HOH HOH . E 5 HOH A 175 595 175 HOH HOH . E 5 HOH A 176 596 176 HOH HOH . E 5 HOH A 177 597 177 HOH HOH . E 5 HOH A 178 598 178 HOH HOH . E 5 HOH A 179 599 179 HOH HOH . E 5 HOH A 180 600 180 HOH HOH . E 5 HOH A 181 601 181 HOH HOH . E 5 HOH A 182 602 182 HOH HOH . E 5 HOH A 183 603 183 HOH HOH . E 5 HOH A 184 604 184 HOH HOH . E 5 HOH A 185 605 185 HOH HOH . E 5 HOH A 186 606 186 HOH HOH . E 5 HOH A 187 607 187 HOH HOH . E 5 HOH A 188 608 188 HOH HOH . E 5 HOH A 189 609 189 HOH HOH . E 5 HOH A 190 610 190 HOH HOH . E 5 HOH A 191 611 191 HOH HOH . E 5 HOH A 192 612 192 HOH HOH . E 5 HOH A 193 613 193 HOH HOH . E 5 HOH A 194 614 194 HOH HOH . E 5 HOH A 195 615 195 HOH HOH . E 5 HOH A 196 616 196 HOH HOH . E 5 HOH A 197 617 197 HOH HOH . E 5 HOH A 198 618 198 HOH HOH . E 5 HOH A 199 619 199 HOH HOH . E 5 HOH A 200 620 200 HOH HOH . E 5 HOH A 201 621 201 HOH HOH . E 5 HOH A 202 622 202 HOH HOH . E 5 HOH A 203 623 203 HOH HOH . E 5 HOH A 204 624 204 HOH HOH . E 5 HOH A 205 625 205 HOH HOH . E 5 HOH A 206 626 206 HOH HOH . E 5 HOH A 207 627 207 HOH HOH . E 5 HOH A 208 628 208 HOH HOH . E 5 HOH A 209 629 209 HOH HOH . E 5 HOH A 210 630 210 HOH HOH . E 5 HOH A 211 631 211 HOH HOH . E 5 HOH A 212 632 212 HOH HOH . E 5 HOH A 213 633 213 HOH HOH . E 5 HOH A 214 634 214 HOH HOH . E 5 HOH A 215 635 215 HOH HOH . E 5 HOH A 216 636 216 HOH HOH . E 5 HOH A 217 637 217 HOH HOH . E 5 HOH A 218 638 218 HOH HOH . E 5 HOH A 219 639 219 HOH HOH . E 5 HOH A 220 640 220 HOH HOH . E 5 HOH A 221 641 221 HOH HOH . E 5 HOH A 222 642 222 HOH HOH . E 5 HOH A 223 643 223 HOH HOH . E 5 HOH A 224 644 224 HOH HOH . E 5 HOH A 225 645 225 HOH HOH . E 5 HOH A 226 646 226 HOH HOH . E 5 HOH A 227 647 227 HOH HOH . E 5 HOH A 228 648 228 HOH HOH . E 5 HOH A 229 649 229 HOH HOH . E 5 HOH A 230 650 230 HOH HOH . E 5 HOH A 231 651 231 HOH HOH . E 5 HOH A 232 652 232 HOH HOH . E 5 HOH A 233 653 233 HOH HOH . E 5 HOH A 234 654 234 HOH HOH . E 5 HOH A 235 655 235 HOH HOH . E 5 HOH A 236 656 236 HOH HOH . E 5 HOH A 237 657 237 HOH HOH . E 5 HOH A 238 658 238 HOH HOH . E 5 HOH A 239 659 239 HOH HOH . E 5 HOH A 240 660 240 HOH HOH . E 5 HOH A 241 661 241 HOH HOH . E 5 HOH A 242 662 242 HOH HOH . E 5 HOH A 243 663 243 HOH HOH . E 5 HOH A 244 664 244 HOH HOH . E 5 HOH A 245 665 245 HOH HOH . E 5 HOH A 246 666 246 HOH HOH . E 5 HOH A 247 667 247 HOH HOH . E 5 HOH A 248 668 248 HOH HOH . E 5 HOH A 249 669 249 HOH HOH . E 5 HOH A 250 670 250 HOH HOH . E 5 HOH A 251 671 251 HOH HOH . E 5 HOH A 252 672 252 HOH HOH . E 5 HOH A 253 673 253 HOH HOH . E 5 HOH A 254 674 254 HOH HOH . E 5 HOH A 255 675 255 HOH HOH . E 5 HOH A 256 676 256 HOH HOH . E 5 HOH A 257 677 257 HOH HOH . E 5 HOH A 258 678 258 HOH HOH . E 5 HOH A 259 679 259 HOH HOH . E 5 HOH A 260 680 260 HOH HOH . E 5 HOH A 261 681 261 HOH HOH . E 5 HOH A 262 682 262 HOH HOH . E 5 HOH A 263 683 263 HOH HOH . E 5 HOH A 264 684 264 HOH HOH . E 5 HOH A 265 685 265 HOH HOH . E 5 HOH A 266 686 266 HOH HOH . E 5 HOH A 267 687 267 HOH HOH . E 5 HOH A 268 688 268 HOH HOH . E 5 HOH A 269 689 269 HOH HOH . E 5 HOH A 270 690 270 HOH HOH . E 5 HOH A 271 691 271 HOH HOH . E 5 HOH A 272 692 272 HOH HOH . E 5 HOH A 273 693 273 HOH HOH . E 5 HOH A 274 694 274 HOH HOH . E 5 HOH A 275 695 275 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OXY . . . C 3 18.795 10.791 10.957 0.95 13.16 ? O1 OXY 417 A 1 HETATM 2 O O2 OXY . . . C 3 19.313 9.77 11.548 0.95 13.31 ? O2 OXY 417 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #