data_1Z9H # _model_server_result.job_id yDOCDNhaUWajFtaAiYQFtw _model_server_result.datetime_utc '2024-11-23 14:35:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":378}' # _entry.id 1Z9H # _exptl.entry_id 1Z9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.6 _cell.angle_gamma 90 _cell.entry_id 1Z9H _cell.length_a 128.24 _cell.length_b 122.83 _cell.length_c 111.53 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA octameric 8 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,Q,R 1 1 C,D,K,L,M,N,O,P,S,T 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 3 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 O N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 1Z9H _atom_sites.fract_transf_matrix[1][1] 0.007798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002931 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009579 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ACT A 1 378 477 ACT ACT . F 3 IMN A 1 379 476 IMN IMN . G 4 CL B 1 378 475 CL CL- . H 2 ACT B 1 379 477 ACT ACT . I 4 CL B 1 380 475 CL CL- . J 3 IMN B 1 381 476 IMN IMN . K 2 ACT C 1 378 477 ACT ACT . L 3 IMN C 1 379 476 IMN IMN . M 4 CL D 1 378 475 CL CL- . N 4 CL D 1 475 475 CL CL- . O 2 ACT D 1 477 477 ACT ACT . P 3 IMN D 1 476 476 IMN IMN . Q 5 HOH A 1 1 1 HOH H2O . Q 5 HOH A 2 5 5 HOH H2O . Q 5 HOH A 3 9 9 HOH H2O . Q 5 HOH A 4 13 13 HOH H2O . Q 5 HOH A 5 17 17 HOH H2O . Q 5 HOH A 6 21 21 HOH H2O . Q 5 HOH A 7 25 25 HOH H2O . Q 5 HOH A 8 29 29 HOH H2O . Q 5 HOH A 9 34 34 HOH H2O . Q 5 HOH A 10 37 37 HOH H2O . Q 5 HOH A 11 41 41 HOH H2O . Q 5 HOH A 12 45 45 HOH H2O . Q 5 HOH A 13 52 52 HOH H2O . Q 5 HOH A 14 56 56 HOH H2O . Q 5 HOH A 15 57 57 HOH H2O . Q 5 HOH A 16 59 59 HOH H2O . Q 5 HOH A 17 61 61 HOH H2O . Q 5 HOH A 18 63 63 HOH H2O . Q 5 HOH A 19 65 65 HOH H2O . Q 5 HOH A 20 67 67 HOH H2O . Q 5 HOH A 21 77 77 HOH H2O . Q 5 HOH A 22 81 81 HOH H2O . Q 5 HOH A 23 85 85 HOH H2O . R 5 HOH B 1 2 2 HOH H2O . R 5 HOH B 2 6 6 HOH H2O . R 5 HOH B 3 10 10 HOH H2O . R 5 HOH B 4 14 14 HOH H2O . R 5 HOH B 5 18 18 HOH H2O . R 5 HOH B 6 22 22 HOH H2O . R 5 HOH B 7 26 26 HOH H2O . R 5 HOH B 8 30 30 HOH H2O . R 5 HOH B 9 33 33 HOH H2O . R 5 HOH B 10 38 38 HOH H2O . R 5 HOH B 11 42 42 HOH H2O . R 5 HOH B 12 46 46 HOH H2O . R 5 HOH B 13 49 49 HOH H2O . R 5 HOH B 14 50 50 HOH H2O . R 5 HOH B 15 51 51 HOH H2O . R 5 HOH B 16 53 53 HOH H2O . R 5 HOH B 17 54 54 HOH H2O . R 5 HOH B 18 58 58 HOH H2O . R 5 HOH B 19 64 64 HOH H2O . R 5 HOH B 20 66 66 HOH H2O . R 5 HOH B 21 69 69 HOH H2O . R 5 HOH B 22 72 72 HOH H2O . R 5 HOH B 23 74 74 HOH H2O . R 5 HOH B 24 75 75 HOH H2O . R 5 HOH B 25 80 80 HOH H2O . R 5 HOH B 26 86 86 HOH H2O . S 5 HOH C 1 3 3 HOH H2O . S 5 HOH C 2 7 7 HOH H2O . S 5 HOH C 3 11 11 HOH H2O . S 5 HOH C 4 15 15 HOH H2O . S 5 HOH C 5 19 19 HOH H2O . S 5 HOH C 6 23 23 HOH H2O . S 5 HOH C 7 27 27 HOH H2O . S 5 HOH C 8 31 31 HOH H2O . S 5 HOH C 9 36 36 HOH H2O . S 5 HOH C 10 39 39 HOH H2O . S 5 HOH C 11 43 43 HOH H2O . S 5 HOH C 12 47 47 HOH H2O . S 5 HOH C 13 60 60 HOH H2O . S 5 HOH C 14 62 62 HOH H2O . S 5 HOH C 15 68 68 HOH H2O . S 5 HOH C 16 76 76 HOH H2O . S 5 HOH C 17 78 78 HOH H2O . S 5 HOH C 18 79 79 HOH H2O . S 5 HOH C 19 82 82 HOH H2O . S 5 HOH C 20 84 84 HOH H2O . S 5 HOH C 21 87 87 HOH H2O . T 5 HOH D 1 478 4 HOH H2O . T 5 HOH D 2 479 8 HOH H2O . T 5 HOH D 3 480 12 HOH H2O . T 5 HOH D 4 481 16 HOH H2O . T 5 HOH D 5 482 20 HOH H2O . T 5 HOH D 6 483 24 HOH H2O . T 5 HOH D 7 484 28 HOH H2O . T 5 HOH D 8 485 32 HOH H2O . T 5 HOH D 9 486 35 HOH H2O . T 5 HOH D 10 487 40 HOH H2O . T 5 HOH D 11 488 44 HOH H2O . T 5 HOH D 12 489 48 HOH H2O . T 5 HOH D 13 490 55 HOH H2O . T 5 HOH D 14 491 70 HOH H2O . T 5 HOH D 15 492 71 HOH H2O . T 5 HOH D 16 493 73 HOH H2O . T 5 HOH D 17 494 83 HOH H2O . T 5 HOH D 18 495 88 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . K 2 17.479 17.757 10.088 1 13.48 ? C ACT 378 C 1 HETATM 2 O O ACT . . . K 2 18.512 18.006 9.325 1 14.77 ? O ACT 378 C 1 HETATM 3 O OXT ACT . . . K 2 16.796 18.636 10.745 1 14.21 ? OXT ACT 378 C 1 HETATM 4 C CH3 ACT . . . K 2 16.974 16.35 10.269 1 16.06 ? CH3 ACT 378 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #