data_1Z9T # _model_server_result.job_id iPVsNXJeyuN1zuJOixkhgA _model_server_result.datetime_utc '2024-11-27 19:48:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1z9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":245}' # _entry.id 1Z9T # _exptl.entry_id 1Z9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1Z9T _cell.length_a 80.711 _cell.length_b 80.711 _cell.length_c 90.589 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Z9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 114 A VAL 102 1_555 A N MSE 115 A MSE 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 115 A MSE 103 1_555 A N THR 116 A THR 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale3 A C PHE 184 A PHE 172 1_555 A N MSE 185 A MSE 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C MSE 185 A MSE 173 1_555 A N ALA 186 A ALA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale5 A C ARG 247 A ARG 235 1_555 A N MSE 248 A MSE 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 248 A MSE 236 1_555 A N ALA 249 A ALA 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 1Z9T _atom_sites.fract_transf_matrix[1][1] 0.01239 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01104 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 244 1 CIT CIT . C 2 CIT A 1 245 2 CIT CIT . D 3 EDO A 1 246 3 EDO EDO . E 3 EDO A 1 247 4 EDO EDO . F 3 EDO A 1 248 5 EDO EDO . G 3 EDO A 1 249 6 EDO EDO . H 3 EDO A 1 250 7 EDO EDO . I 3 EDO A 1 251 8 EDO EDO . J 3 EDO A 1 252 9 EDO EDO . K 3 EDO A 1 253 10 EDO EDO . L 3 EDO A 1 254 11 EDO EDO . M 3 EDO A 1 255 12 EDO EDO . N 3 EDO A 1 256 13 EDO EDO . O 3 EDO A 1 257 14 EDO EDO . P 3 EDO A 1 258 15 EDO EDO . Q 3 EDO A 1 259 16 EDO EDO . R 3 EDO A 1 260 17 EDO EDO . S 3 EDO A 1 261 18 EDO EDO . T 3 EDO A 1 262 19 EDO EDO . U 3 EDO A 1 263 20 EDO EDO . V 3 EDO A 1 264 21 EDO EDO . W 4 HOH A 1 265 22 HOH HOH . W 4 HOH A 2 266 23 HOH HOH . W 4 HOH A 3 267 24 HOH HOH . W 4 HOH A 4 268 25 HOH HOH . W 4 HOH A 5 269 26 HOH HOH . W 4 HOH A 6 270 27 HOH HOH . W 4 HOH A 7 271 28 HOH HOH . W 4 HOH A 8 272 29 HOH HOH . W 4 HOH A 9 273 30 HOH HOH . W 4 HOH A 10 274 31 HOH HOH . W 4 HOH A 11 275 32 HOH HOH . W 4 HOH A 12 276 33 HOH HOH . W 4 HOH A 13 277 34 HOH HOH . W 4 HOH A 14 278 35 HOH HOH . W 4 HOH A 15 279 36 HOH HOH . W 4 HOH A 16 280 37 HOH HOH . W 4 HOH A 17 281 38 HOH HOH . W 4 HOH A 18 282 39 HOH HOH . W 4 HOH A 19 283 40 HOH HOH . W 4 HOH A 20 284 41 HOH HOH . W 4 HOH A 21 285 42 HOH HOH . W 4 HOH A 22 286 43 HOH HOH . W 4 HOH A 23 287 44 HOH HOH . W 4 HOH A 24 288 45 HOH HOH . W 4 HOH A 25 289 46 HOH HOH . W 4 HOH A 26 290 47 HOH HOH . W 4 HOH A 27 291 48 HOH HOH . W 4 HOH A 28 292 49 HOH HOH . W 4 HOH A 29 293 50 HOH HOH . W 4 HOH A 30 294 51 HOH HOH . W 4 HOH A 31 295 52 HOH HOH . W 4 HOH A 32 296 53 HOH HOH . W 4 HOH A 33 297 54 HOH HOH . W 4 HOH A 34 298 55 HOH HOH . W 4 HOH A 35 299 56 HOH HOH . W 4 HOH A 36 300 57 HOH HOH . W 4 HOH A 37 301 58 HOH HOH . W 4 HOH A 38 302 59 HOH HOH . W 4 HOH A 39 303 60 HOH HOH . W 4 HOH A 40 304 61 HOH HOH . W 4 HOH A 41 305 62 HOH HOH . W 4 HOH A 42 306 63 HOH HOH . W 4 HOH A 43 307 64 HOH HOH . W 4 HOH A 44 308 65 HOH HOH . W 4 HOH A 45 309 66 HOH HOH . W 4 HOH A 46 310 67 HOH HOH . W 4 HOH A 47 311 68 HOH HOH . W 4 HOH A 48 312 69 HOH HOH . W 4 HOH A 49 313 70 HOH HOH . W 4 HOH A 50 314 71 HOH HOH . W 4 HOH A 51 315 72 HOH HOH . W 4 HOH A 52 316 73 HOH HOH . W 4 HOH A 53 317 74 HOH HOH . W 4 HOH A 54 318 75 HOH HOH . W 4 HOH A 55 319 76 HOH HOH . W 4 HOH A 56 320 77 HOH HOH . W 4 HOH A 57 321 78 HOH HOH . W 4 HOH A 58 322 79 HOH HOH . W 4 HOH A 59 323 80 HOH HOH . W 4 HOH A 60 324 81 HOH HOH . W 4 HOH A 61 325 82 HOH HOH . W 4 HOH A 62 326 83 HOH HOH . W 4 HOH A 63 327 84 HOH HOH . W 4 HOH A 64 328 85 HOH HOH . W 4 HOH A 65 329 86 HOH HOH . W 4 HOH A 66 330 87 HOH HOH . W 4 HOH A 67 331 88 HOH HOH . W 4 HOH A 68 332 89 HOH HOH . W 4 HOH A 69 333 90 HOH HOH . W 4 HOH A 70 334 91 HOH HOH . W 4 HOH A 71 335 92 HOH HOH . W 4 HOH A 72 336 93 HOH HOH . W 4 HOH A 73 337 94 HOH HOH . W 4 HOH A 74 338 95 HOH HOH . W 4 HOH A 75 339 96 HOH HOH . W 4 HOH A 76 340 97 HOH HOH . W 4 HOH A 77 341 98 HOH HOH . W 4 HOH A 78 342 99 HOH HOH . W 4 HOH A 79 343 100 HOH HOH . W 4 HOH A 80 344 101 HOH HOH . W 4 HOH A 81 345 102 HOH HOH . W 4 HOH A 82 346 103 HOH HOH . W 4 HOH A 83 347 104 HOH HOH . W 4 HOH A 84 348 105 HOH HOH . W 4 HOH A 85 349 106 HOH HOH . W 4 HOH A 86 350 107 HOH HOH . W 4 HOH A 87 351 108 HOH HOH . W 4 HOH A 88 352 109 HOH HOH . W 4 HOH A 89 353 110 HOH HOH . W 4 HOH A 90 354 112 HOH HOH . W 4 HOH A 91 355 113 HOH HOH . W 4 HOH A 92 356 114 HOH HOH . W 4 HOH A 93 357 115 HOH HOH . W 4 HOH A 94 358 116 HOH HOH . W 4 HOH A 95 359 117 HOH HOH . W 4 HOH A 96 360 118 HOH HOH . W 4 HOH A 97 361 119 HOH HOH . W 4 HOH A 98 362 120 HOH HOH . W 4 HOH A 99 363 121 HOH HOH . W 4 HOH A 100 364 122 HOH HOH . W 4 HOH A 101 365 123 HOH HOH . W 4 HOH A 102 366 124 HOH HOH . W 4 HOH A 103 367 125 HOH HOH . W 4 HOH A 104 368 126 HOH HOH . W 4 HOH A 105 369 127 HOH HOH . W 4 HOH A 106 370 128 HOH HOH . W 4 HOH A 107 371 129 HOH HOH . W 4 HOH A 108 372 130 HOH HOH . W 4 HOH A 109 373 131 HOH HOH . W 4 HOH A 110 374 132 HOH HOH . W 4 HOH A 111 375 133 HOH HOH . W 4 HOH A 112 376 134 HOH HOH . W 4 HOH A 113 377 135 HOH HOH . W 4 HOH A 114 378 136 HOH HOH . W 4 HOH A 115 379 137 HOH HOH . W 4 HOH A 116 380 138 HOH HOH . W 4 HOH A 117 381 139 HOH HOH . W 4 HOH A 118 382 140 HOH HOH . W 4 HOH A 119 383 141 HOH HOH . W 4 HOH A 120 384 142 HOH HOH . W 4 HOH A 121 385 143 HOH HOH . W 4 HOH A 122 386 144 HOH HOH . W 4 HOH A 123 387 145 HOH HOH . W 4 HOH A 124 388 146 HOH HOH . W 4 HOH A 125 389 147 HOH HOH . W 4 HOH A 126 390 148 HOH HOH . W 4 HOH A 127 391 149 HOH HOH . W 4 HOH A 128 392 150 HOH HOH . W 4 HOH A 129 393 151 HOH HOH . W 4 HOH A 130 394 152 HOH HOH . W 4 HOH A 131 395 153 HOH HOH . W 4 HOH A 132 396 154 HOH HOH . W 4 HOH A 133 397 155 HOH HOH . W 4 HOH A 134 398 156 HOH HOH . W 4 HOH A 135 399 157 HOH HOH . W 4 HOH A 136 400 158 HOH HOH . W 4 HOH A 137 401 159 HOH HOH . W 4 HOH A 138 402 160 HOH HOH . W 4 HOH A 139 403 161 HOH HOH . W 4 HOH A 140 404 162 HOH HOH . W 4 HOH A 141 405 163 HOH HOH . W 4 HOH A 142 406 164 HOH HOH . W 4 HOH A 143 407 165 HOH HOH . W 4 HOH A 144 408 166 HOH HOH . W 4 HOH A 145 409 167 HOH HOH . W 4 HOH A 146 410 168 HOH HOH . W 4 HOH A 147 411 169 HOH HOH . W 4 HOH A 148 412 170 HOH HOH . W 4 HOH A 149 413 171 HOH HOH . W 4 HOH A 150 414 172 HOH HOH . W 4 HOH A 151 415 173 HOH HOH . W 4 HOH A 152 416 174 HOH HOH . W 4 HOH A 153 417 175 HOH HOH . W 4 HOH A 154 418 176 HOH HOH . W 4 HOH A 155 419 177 HOH HOH . W 4 HOH A 156 420 178 HOH HOH . W 4 HOH A 157 421 179 HOH HOH . W 4 HOH A 158 422 180 HOH HOH . W 4 HOH A 159 423 181 HOH HOH . W 4 HOH A 160 424 182 HOH HOH . W 4 HOH A 161 425 183 HOH HOH . W 4 HOH A 162 426 184 HOH HOH . W 4 HOH A 163 427 185 HOH HOH . W 4 HOH A 164 428 186 HOH HOH . W 4 HOH A 165 429 187 HOH HOH . W 4 HOH A 166 430 188 HOH HOH . W 4 HOH A 167 431 189 HOH HOH . W 4 HOH A 168 432 190 HOH HOH . W 4 HOH A 169 433 191 HOH HOH . W 4 HOH A 170 434 192 HOH HOH . W 4 HOH A 171 435 193 HOH HOH . W 4 HOH A 172 436 194 HOH HOH . W 4 HOH A 173 437 195 HOH HOH . W 4 HOH A 174 438 196 HOH HOH . W 4 HOH A 175 439 197 HOH HOH . W 4 HOH A 176 440 198 HOH HOH . W 4 HOH A 177 441 199 HOH HOH . W 4 HOH A 178 442 200 HOH HOH . W 4 HOH A 179 443 201 HOH HOH . W 4 HOH A 180 444 202 HOH HOH . W 4 HOH A 181 445 203 HOH HOH . W 4 HOH A 182 446 204 HOH HOH . W 4 HOH A 183 447 205 HOH HOH . W 4 HOH A 184 448 206 HOH HOH . W 4 HOH A 185 449 207 HOH HOH . W 4 HOH A 186 450 208 HOH HOH . W 4 HOH A 187 451 209 HOH HOH . W 4 HOH A 188 452 210 HOH HOH . W 4 HOH A 189 453 211 HOH HOH . W 4 HOH A 190 454 212 HOH HOH . W 4 HOH A 191 455 213 HOH HOH . W 4 HOH A 192 456 214 HOH HOH . W 4 HOH A 193 457 215 HOH HOH . W 4 HOH A 194 458 216 HOH HOH . W 4 HOH A 195 459 217 HOH HOH . W 4 HOH A 196 460 218 HOH HOH . W 4 HOH A 197 461 219 HOH HOH . W 4 HOH A 198 462 220 HOH HOH . W 4 HOH A 199 463 221 HOH HOH . W 4 HOH A 200 464 222 HOH HOH . W 4 HOH A 201 465 223 HOH HOH . W 4 HOH A 202 466 224 HOH HOH . W 4 HOH A 203 467 225 HOH HOH . W 4 HOH A 204 468 226 HOH HOH . W 4 HOH A 205 469 227 HOH HOH . W 4 HOH A 206 470 228 HOH HOH . W 4 HOH A 207 471 229 HOH HOH . W 4 HOH A 208 472 230 HOH HOH . W 4 HOH A 209 473 231 HOH HOH . W 4 HOH A 210 474 232 HOH HOH . W 4 HOH A 211 475 233 HOH HOH . W 4 HOH A 212 476 234 HOH HOH . W 4 HOH A 213 477 235 HOH HOH . W 4 HOH A 214 478 236 HOH HOH . W 4 HOH A 215 479 237 HOH HOH . W 4 HOH A 216 480 238 HOH HOH . W 4 HOH A 217 481 239 HOH HOH . W 4 HOH A 218 482 240 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 2 -3.844 22.611 2.327 1 21.44 ? C1 CIT 245 A 1 HETATM 2 O O1 CIT . . . C 2 -4.424 23.571 1.75 1 20 ? O1 CIT 245 A 1 HETATM 3 O O2 CIT . . . C 2 -4.478 21.704 2.891 1 15.31 ? O2 CIT 245 A 1 HETATM 4 C C2 CIT . . . C 2 -2.334 22.443 2.313 1 19.71 ? C2 CIT 245 A 1 HETATM 5 C C3 CIT . . . C 2 -1.594 23.574 1.61 1 28.69 ? C3 CIT 245 A 1 HETATM 6 O O7 CIT . . . C 2 -1.798 23.668 0.134 1 21.92 ? O7 CIT 245 A 1 HETATM 7 C C4 CIT . . . C 2 -0.142 23.514 2.132 1 21.53 ? C4 CIT 245 A 1 HETATM 8 C C5 CIT . . . C 2 0.665 24.674 1.613 1 31.33 ? C5 CIT 245 A 1 HETATM 9 O O3 CIT . . . C 2 1.033 24.704 0.414 1 29.29 ? O3 CIT 245 A 1 HETATM 10 O O4 CIT . . . C 2 0.914 25.591 2.409 1 30.86 ? O4 CIT 245 A 1 HETATM 11 C C6 CIT . . . C 2 -2.044 24.874 2.07 1 34.27 ? C6 CIT 245 A 1 HETATM 12 O O5 CIT . . . C 2 -2.151 24.969 3.319 1 21.95 ? O5 CIT 245 A 1 HETATM 13 O O6 CIT . . . C 2 -2.244 25.721 1.134 1 22.7 ? O6 CIT 245 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #