data_1ZC4
#
_model_server_result.job_id            dDMJaBIDfUAjWFGmobl6cQ 
_model_server_result.datetime_utc      '2024-11-28 03:09:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1zc4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":200}' 
#
_entry.id    1ZC4 
#
_exptl.entry_id    1ZC4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.77 
_cell.angle_gamma         90 
_cell.entry_id            1ZC4 
_cell.length_a            52.912 
_cell.length_b            113.389 
_cell.length_c            70.68 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZC4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,I,L 1 1 
B,C,G,H,J,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 20 A SER 28 1_555 E MG MG . A MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.909 ? 
metalc ? metalc2 A OG1 THR 38 A THR 46 1_555 E MG MG . A MG 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc3 E MG MG . A MG 200 1_555 F O2G GNP . A GNP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc4 E MG MG . A MG 200 1_555 F O2B GNP . A GNP 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc5 E MG MG . A MG 200 1_555 I O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc6 E MG MG . A MG 200 1_555 I O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc7 C OG SER 20 C SER 28 1_555 G MG MG . C MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
metalc ? metalc8 C OG1 THR 38 C THR 46 1_555 G MG MG . C MG 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc9 G MG MG . C MG 300 1_555 H O2G GNP . C GNP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? 
metalc ? metalc10 G MG MG . C MG 300 1_555 H O2B GNP . C GNP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc11 G MG MG . C MG 300 1_555 K O HOH . C HOH 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc12 G MG MG . C MG 300 1_555 K O HOH . C HOH 550 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1ZC4 
_atom_sites.fract_transf_matrix[1][1]    0.018899 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004285 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008819 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014507 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 200 200 MG MG . 
F 4 GNP A 1 400 400 GNP GNP . 
G 3 MG C 1 300 300 MG MG . 
H 4 GNP C 1 500 500 GNP GNP . 
I 5 HOH A 1 401 5 HOH WAT . 
I 5 HOH A 2 402 7 HOH WAT . 
I 5 HOH A 3 403 9 HOH WAT . 
I 5 HOH A 4 404 15 HOH WAT . 
I 5 HOH A 5 405 16 HOH WAT . 
I 5 HOH A 6 406 18 HOH WAT . 
I 5 HOH A 7 407 19 HOH WAT . 
I 5 HOH A 8 408 25 HOH WAT . 
I 5 HOH A 9 409 26 HOH WAT . 
I 5 HOH A 10 410 38 HOH WAT . 
I 5 HOH A 11 411 40 HOH WAT . 
I 5 HOH A 12 412 44 HOH WAT . 
I 5 HOH A 13 413 46 HOH WAT . 
I 5 HOH A 14 414 51 HOH WAT . 
I 5 HOH A 15 415 56 HOH WAT . 
I 5 HOH A 16 416 68 HOH WAT . 
I 5 HOH A 17 417 69 HOH WAT . 
I 5 HOH A 18 418 73 HOH WAT . 
I 5 HOH A 19 419 74 HOH WAT . 
I 5 HOH A 20 420 79 HOH WAT . 
I 5 HOH A 21 421 87 HOH WAT . 
I 5 HOH A 22 422 90 HOH WAT . 
I 5 HOH A 23 423 92 HOH WAT . 
I 5 HOH A 24 424 94 HOH WAT . 
I 5 HOH A 25 425 97 HOH WAT . 
I 5 HOH A 26 426 99 HOH WAT . 
I 5 HOH A 27 427 108 HOH WAT . 
I 5 HOH A 28 428 110 HOH WAT . 
I 5 HOH A 29 429 111 HOH WAT . 
I 5 HOH A 30 430 116 HOH WAT . 
I 5 HOH A 31 431 118 HOH WAT . 
I 5 HOH A 32 432 124 HOH WAT . 
I 5 HOH A 33 433 125 HOH WAT . 
I 5 HOH A 34 434 127 HOH WAT . 
I 5 HOH A 35 435 128 HOH WAT . 
I 5 HOH A 36 436 131 HOH WAT . 
I 5 HOH A 37 437 133 HOH WAT . 
I 5 HOH A 38 438 136 HOH WAT . 
I 5 HOH A 39 439 139 HOH WAT . 
I 5 HOH A 40 440 140 HOH WAT . 
I 5 HOH A 41 441 146 HOH WAT . 
I 5 HOH A 42 442 147 HOH WAT . 
I 5 HOH A 43 443 148 HOH WAT . 
I 5 HOH A 44 444 153 HOH WAT . 
J 5 HOH B 1 2 2 HOH WAT . 
J 5 HOH B 2 6 6 HOH WAT . 
J 5 HOH B 3 13 13 HOH WAT . 
J 5 HOH B 4 14 14 HOH WAT . 
J 5 HOH B 5 17 17 HOH WAT . 
J 5 HOH B 6 22 22 HOH WAT . 
J 5 HOH B 7 23 23 HOH WAT . 
J 5 HOH B 8 33 33 HOH WAT . 
J 5 HOH B 9 34 34 HOH WAT . 
J 5 HOH B 10 35 35 HOH WAT . 
J 5 HOH B 11 50 50 HOH WAT . 
J 5 HOH B 12 53 53 HOH WAT . 
J 5 HOH B 13 60 60 HOH WAT . 
J 5 HOH B 14 61 61 HOH WAT . 
J 5 HOH B 15 65 65 HOH WAT . 
J 5 HOH B 16 67 67 HOH WAT . 
J 5 HOH B 17 70 70 HOH WAT . 
J 5 HOH B 18 71 71 HOH WAT . 
J 5 HOH B 19 78 78 HOH WAT . 
J 5 HOH B 20 89 89 HOH WAT . 
J 5 HOH B 21 95 95 HOH WAT . 
J 5 HOH B 22 102 102 HOH WAT . 
J 5 HOH B 23 103 103 HOH WAT . 
J 5 HOH B 24 117 117 HOH WAT . 
J 5 HOH B 25 119 119 HOH WAT . 
J 5 HOH B 26 126 126 HOH WAT . 
J 5 HOH B 27 130 130 HOH WAT . 
J 5 HOH B 28 135 135 HOH WAT . 
J 5 HOH B 29 137 137 HOH WAT . 
J 5 HOH B 30 143 143 HOH WAT . 
J 5 HOH B 31 144 144 HOH WAT . 
K 5 HOH C 1 501 3 HOH WAT . 
K 5 HOH C 2 502 4 HOH WAT . 
K 5 HOH C 3 503 10 HOH WAT . 
K 5 HOH C 4 504 11 HOH WAT . 
K 5 HOH C 5 505 12 HOH WAT . 
K 5 HOH C 6 506 21 HOH WAT . 
K 5 HOH C 7 507 24 HOH WAT . 
K 5 HOH C 8 508 27 HOH WAT . 
K 5 HOH C 9 509 28 HOH WAT . 
K 5 HOH C 10 510 32 HOH WAT . 
K 5 HOH C 11 511 37 HOH WAT . 
K 5 HOH C 12 512 39 HOH WAT . 
K 5 HOH C 13 513 42 HOH WAT . 
K 5 HOH C 14 514 47 HOH WAT . 
K 5 HOH C 15 515 55 HOH WAT . 
K 5 HOH C 16 516 58 HOH WAT . 
K 5 HOH C 17 517 59 HOH WAT . 
K 5 HOH C 18 518 62 HOH WAT . 
K 5 HOH C 19 519 63 HOH WAT . 
K 5 HOH C 20 520 66 HOH WAT . 
K 5 HOH C 21 521 72 HOH WAT . 
K 5 HOH C 22 522 76 HOH WAT . 
K 5 HOH C 23 523 77 HOH WAT . 
K 5 HOH C 24 524 80 HOH WAT . 
K 5 HOH C 25 525 81 HOH WAT . 
K 5 HOH C 26 526 82 HOH WAT . 
K 5 HOH C 27 527 83 HOH WAT . 
K 5 HOH C 28 528 85 HOH WAT . 
K 5 HOH C 29 529 86 HOH WAT . 
K 5 HOH C 30 530 88 HOH WAT . 
K 5 HOH C 31 531 91 HOH WAT . 
K 5 HOH C 32 532 93 HOH WAT . 
K 5 HOH C 33 533 98 HOH WAT . 
K 5 HOH C 34 534 100 HOH WAT . 
K 5 HOH C 35 535 104 HOH WAT . 
K 5 HOH C 36 536 106 HOH WAT . 
K 5 HOH C 37 537 107 HOH WAT . 
K 5 HOH C 38 538 109 HOH WAT . 
K 5 HOH C 39 539 113 HOH WAT . 
K 5 HOH C 40 540 115 HOH WAT . 
K 5 HOH C 41 541 122 HOH WAT . 
K 5 HOH C 42 542 123 HOH WAT . 
K 5 HOH C 43 543 132 HOH WAT . 
K 5 HOH C 44 544 134 HOH WAT . 
K 5 HOH C 45 545 138 HOH WAT . 
K 5 HOH C 46 546 145 HOH WAT . 
K 5 HOH C 47 547 149 HOH WAT . 
K 5 HOH C 48 548 150 HOH WAT . 
K 5 HOH C 49 549 151 HOH WAT . 
K 5 HOH C 50 550 152 HOH WAT . 
L 5 HOH D 1 1 1 HOH WAT . 
L 5 HOH D 2 8 8 HOH WAT . 
L 5 HOH D 3 20 20 HOH WAT . 
L 5 HOH D 4 29 29 HOH WAT . 
L 5 HOH D 5 30 30 HOH WAT . 
L 5 HOH D 6 31 31 HOH WAT . 
L 5 HOH D 7 36 36 HOH WAT . 
L 5 HOH D 8 41 41 HOH WAT . 
L 5 HOH D 9 43 43 HOH WAT . 
L 5 HOH D 10 45 45 HOH WAT . 
L 5 HOH D 11 48 48 HOH WAT . 
L 5 HOH D 12 49 49 HOH WAT . 
L 5 HOH D 13 52 52 HOH WAT . 
L 5 HOH D 14 54 54 HOH WAT . 
L 5 HOH D 15 57 57 HOH WAT . 
L 5 HOH D 16 64 64 HOH WAT . 
L 5 HOH D 17 75 75 HOH WAT . 
L 5 HOH D 18 84 84 HOH WAT . 
L 5 HOH D 19 96 96 HOH WAT . 
L 5 HOH D 20 101 101 HOH WAT . 
L 5 HOH D 21 105 105 HOH WAT . 
L 5 HOH D 22 112 112 HOH WAT . 
L 5 HOH D 23 114 114 HOH WAT . 
L 5 HOH D 24 120 120 HOH WAT . 
L 5 HOH D 25 121 121 HOH WAT . 
L 5 HOH D 26 129 129 HOH WAT . 
L 5 HOH D 27 141 141 HOH WAT . 
L 5 HOH D 28 142 142 HOH WAT . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               57.172 
_atom_site.Cartn_y               56.816 
_atom_site.Cartn_z               17.417 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.11 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           200 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#