data_1ZCA # _model_server_result.job_id 0el9q18mR4mVtp7V-gLOFw _model_server_result.datetime_utc '2024-10-18 19:35:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zca # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":383}' # _entry.id 1ZCA # _exptl.entry_id 1ZCA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.09 _cell.angle_gamma 90 _cell.entry_id 1ZCA _cell.length_a 57.501 _cell.length_b 85.23 _cell.length_c 82.885 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZCA _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 49 A SER 69 1_555 C MG MG . A MG 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A OG1 THR 186 A THR 206 1_555 C MG MG . A MG 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc3 E O2B GDP . A GDP 382 1_555 C MG MG . A MG 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc4 E O3B GDP . A GDP 382 1_555 D AL ALF . A ALF 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc5 E O2B GDP . A GDP 382 1_555 D AL ALF . A ALF 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.482 ? metalc ? metalc6 C MG MG . A MG 383 1_555 D F4 ALF . A ALF 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 ? metalc ? metalc7 C MG MG . A MG 383 1_555 D F1 ALF . A ALF 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.998 ? metalc ? metalc8 C MG MG . A MG 383 1_555 D AL ALF . A ALF 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.144 ? metalc ? metalc9 C MG MG . A MG 383 1_555 I O HOH . A HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc10 C MG MG . A MG 383 1_555 I O HOH . A HOH 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.755 ? metalc ? metalc11 D AL ALF . A ALF 384 1_555 I O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc12 B OG SER 49 B SER 69 1_555 F MG MG . B MG 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? metalc ? metalc13 B OG1 THR 186 B THR 206 1_555 F MG MG . B MG 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.922 ? metalc ? metalc14 H O2B GDP . B GDP 1382 1_555 F MG MG . B MG 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc15 H O3B GDP . B GDP 1382 1_555 F MG MG . B MG 1383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc16 H O3B GDP . B GDP 1382 1_555 G AL ALF . B ALF 1384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc17 F MG MG . B MG 1383 1_555 G F4 ALF . B ALF 1384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.771 ? metalc ? metalc18 F MG MG . B MG 1383 1_555 G F1 ALF . B ALF 1384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc19 F MG MG . B MG 1383 1_555 G AL ALF . B ALF 1384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc20 F MG MG . B MG 1383 1_555 J O HOH . B HOH 1386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc21 F MG MG . B MG 1383 1_555 J O HOH . B HOH 1387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc22 G AL ALF . B ALF 1384 1_555 J O HOH . B HOH 1385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZCA _atom_sites.fract_transf_matrix[1][1] 0.017391 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005015 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011733 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012557 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 383 383 MG MG . D 3 ALF A 1 384 384 ALF ALF . E 4 GDP A 1 382 382 GDP GDP . F 2 MG B 1 1383 383 MG MG . G 3 ALF B 1 1384 384 ALF ALF . H 4 GDP B 1 1382 382 GDP GDP . I 5 HOH A 1 385 385 HOH HOH . I 5 HOH A 2 386 386 HOH HOH . I 5 HOH A 3 387 387 HOH HOH . J 5 HOH B 1 1385 385 HOH HOH . J 5 HOH B 2 1386 386 HOH HOH . J 5 HOH B 3 1387 387 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.519 _atom_site.Cartn_y 12.183 _atom_site.Cartn_z 35.903 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 383 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #