data_1ZCM # _model_server_result.job_id eMqys7lB_GT3kO_zWP3o0A _model_server_result.datetime_utc '2024-11-26 05:34:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zcm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 1ZCM # _exptl.entry_id 1ZCM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZCM _cell.length_a 50.44 _cell.length_b 62.74 _cell.length_c 99.26 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZCM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 83 A CYS 115 1_555 D C32 C1N . A C1N 1115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.674 ? metalc ? metalc1 A O VAL 67 A VAL 99 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc2 A O GLY 69 A GLY 101 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc3 A OD1 ASP 74 A ASP 106 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc4 A OD2 ASP 74 A ASP 106 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc5 A OE2 GLU 153 A GLU 185 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc6 A OE1 GLU 153 A GLU 185 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc7 A OE1 GLU 270 A GLU 302 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc8 A OE2 GLU 270 A GLU 302 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc9 A OD2 ASP 277 A ASP 309 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.222 ? metalc ? metalc10 A OD1 ASP 277 A ASP 309 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc11 A O MET 297 A MET 329 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc12 A OD1 ASP 299 A ASP 331 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc13 A O GLU 301 A GLU 333 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc14 B CA CA . A CA 1001 1_555 E O HOH . A HOH 1184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc15 C CA CA . A CA 1002 1_555 E O HOH . A HOH 1185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc16 C CA CA . A CA 1002 1_555 E O HOH . A HOH 1197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.541 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZCM _atom_sites.fract_transf_matrix[1][1] 0.019826 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1001 1001 CA CA . C 2 CA A 1 1002 1002 CA CA . D 3 C1N A 1 1115 1115 C1N C1N . E 4 HOH A 1 1116 1 HOH HOH . E 4 HOH A 2 1117 2 HOH HOH . E 4 HOH A 3 1118 3 HOH HOH . E 4 HOH A 4 1119 4 HOH HOH . E 4 HOH A 5 1120 5 HOH HOH . E 4 HOH A 6 1121 6 HOH HOH . E 4 HOH A 7 1122 7 HOH HOH . E 4 HOH A 8 1123 8 HOH HOH . E 4 HOH A 9 1124 9 HOH HOH . E 4 HOH A 10 1125 10 HOH HOH . E 4 HOH A 11 1126 11 HOH HOH . E 4 HOH A 12 1127 12 HOH HOH . E 4 HOH A 13 1128 13 HOH HOH . E 4 HOH A 14 1129 14 HOH HOH . E 4 HOH A 15 1130 15 HOH HOH . E 4 HOH A 16 1131 16 HOH HOH . E 4 HOH A 17 1132 17 HOH HOH . E 4 HOH A 18 1133 18 HOH HOH . E 4 HOH A 19 1134 19 HOH HOH . E 4 HOH A 20 1135 20 HOH HOH . E 4 HOH A 21 1136 21 HOH HOH . E 4 HOH A 22 1137 22 HOH HOH . E 4 HOH A 23 1138 23 HOH HOH . E 4 HOH A 24 1139 24 HOH HOH . E 4 HOH A 25 1140 25 HOH HOH . E 4 HOH A 26 1141 26 HOH HOH . E 4 HOH A 27 1142 27 HOH HOH . E 4 HOH A 28 1143 28 HOH HOH . E 4 HOH A 29 1144 29 HOH HOH . E 4 HOH A 30 1145 30 HOH HOH . E 4 HOH A 31 1146 31 HOH HOH . E 4 HOH A 32 1147 32 HOH HOH . E 4 HOH A 33 1148 33 HOH HOH . E 4 HOH A 34 1149 34 HOH HOH . E 4 HOH A 35 1150 35 HOH HOH . E 4 HOH A 36 1151 36 HOH HOH . E 4 HOH A 37 1152 37 HOH HOH . E 4 HOH A 38 1153 38 HOH HOH . E 4 HOH A 39 1154 39 HOH HOH . E 4 HOH A 40 1155 40 HOH HOH . E 4 HOH A 41 1156 41 HOH HOH . E 4 HOH A 42 1157 42 HOH HOH . E 4 HOH A 43 1158 43 HOH HOH . E 4 HOH A 44 1159 44 HOH HOH . E 4 HOH A 45 1160 45 HOH HOH . E 4 HOH A 46 1161 46 HOH HOH . E 4 HOH A 47 1162 47 HOH HOH . E 4 HOH A 48 1163 48 HOH HOH . E 4 HOH A 49 1164 49 HOH HOH . E 4 HOH A 50 1165 50 HOH HOH . E 4 HOH A 51 1166 51 HOH HOH . E 4 HOH A 52 1167 52 HOH HOH . E 4 HOH A 53 1168 53 HOH HOH . E 4 HOH A 54 1169 54 HOH HOH . E 4 HOH A 55 1170 55 HOH HOH . E 4 HOH A 56 1171 56 HOH HOH . E 4 HOH A 57 1172 57 HOH HOH . E 4 HOH A 58 1173 58 HOH HOH . E 4 HOH A 59 1174 59 HOH HOH . E 4 HOH A 60 1175 60 HOH HOH . E 4 HOH A 61 1176 61 HOH HOH . E 4 HOH A 62 1177 62 HOH HOH . E 4 HOH A 63 1178 63 HOH HOH . E 4 HOH A 64 1179 64 HOH HOH . E 4 HOH A 65 1180 65 HOH HOH . E 4 HOH A 66 1181 66 HOH HOH . E 4 HOH A 67 1182 67 HOH HOH . E 4 HOH A 68 1183 68 HOH HOH . E 4 HOH A 69 1184 69 HOH HOH . E 4 HOH A 70 1185 70 HOH HOH . E 4 HOH A 71 1186 71 HOH HOH . E 4 HOH A 72 1187 72 HOH HOH . E 4 HOH A 73 1188 73 HOH HOH . E 4 HOH A 74 1189 74 HOH HOH . E 4 HOH A 75 1190 75 HOH HOH . E 4 HOH A 76 1191 76 HOH HOH . E 4 HOH A 77 1192 77 HOH HOH . E 4 HOH A 78 1193 78 HOH HOH . E 4 HOH A 79 1194 79 HOH HOH . E 4 HOH A 80 1195 80 HOH HOH . E 4 HOH A 81 1196 81 HOH HOH . E 4 HOH A 82 1197 82 HOH HOH . E 4 HOH A 83 1198 83 HOH HOH . E 4 HOH A 84 1199 84 HOH HOH . E 4 HOH A 85 1200 85 HOH HOH . E 4 HOH A 86 1201 86 HOH HOH . E 4 HOH A 87 1202 87 HOH HOH . E 4 HOH A 88 1203 88 HOH HOH . E 4 HOH A 89 1204 89 HOH HOH . E 4 HOH A 90 1205 90 HOH HOH . E 4 HOH A 91 1206 91 HOH HOH . E 4 HOH A 92 1207 92 HOH HOH . E 4 HOH A 93 1208 93 HOH HOH . E 4 HOH A 94 1209 94 HOH HOH . E 4 HOH A 95 1210 95 HOH HOH . E 4 HOH A 96 1211 96 HOH HOH . E 4 HOH A 97 1212 97 HOH HOH . E 4 HOH A 98 1213 98 HOH HOH . E 4 HOH A 99 1214 99 HOH HOH . E 4 HOH A 100 1215 100 HOH HOH . E 4 HOH A 101 1216 101 HOH HOH . E 4 HOH A 102 1217 102 HOH HOH . E 4 HOH A 103 1218 103 HOH HOH . E 4 HOH A 104 1219 104 HOH HOH . E 4 HOH A 105 1220 105 HOH HOH . E 4 HOH A 106 1221 106 HOH HOH . E 4 HOH A 107 1222 107 HOH HOH . E 4 HOH A 108 1223 108 HOH HOH . E 4 HOH A 109 1224 109 HOH HOH . E 4 HOH A 110 1225 110 HOH HOH . E 4 HOH A 111 1226 111 HOH HOH . E 4 HOH A 112 1227 112 HOH HOH . E 4 HOH A 113 1228 113 HOH HOH . E 4 HOH A 114 1229 114 HOH HOH . E 4 HOH A 115 1230 115 HOH HOH . E 4 HOH A 116 1231 116 HOH HOH . E 4 HOH A 117 1232 117 HOH HOH . E 4 HOH A 118 1233 118 HOH HOH . E 4 HOH A 119 1234 119 HOH HOH . E 4 HOH A 120 1235 120 HOH HOH . E 4 HOH A 121 1236 121 HOH HOH . E 4 HOH A 122 1237 122 HOH HOH . E 4 HOH A 123 1238 123 HOH HOH . E 4 HOH A 124 1239 124 HOH HOH . E 4 HOH A 125 1240 125 HOH HOH . E 4 HOH A 126 1241 126 HOH HOH . E 4 HOH A 127 1242 127 HOH HOH . E 4 HOH A 128 1243 128 HOH HOH . E 4 HOH A 129 1244 129 HOH HOH . E 4 HOH A 130 1245 130 HOH HOH . E 4 HOH A 131 1246 131 HOH HOH . E 4 HOH A 132 1247 132 HOH HOH . E 4 HOH A 133 1248 133 HOH HOH . E 4 HOH A 134 1249 134 HOH HOH . E 4 HOH A 135 1250 135 HOH HOH . E 4 HOH A 136 1251 136 HOH HOH . E 4 HOH A 137 1252 137 HOH HOH . E 4 HOH A 138 1253 138 HOH HOH . E 4 HOH A 139 1254 139 HOH HOH . E 4 HOH A 140 1255 140 HOH HOH . E 4 HOH A 141 1256 141 HOH HOH . E 4 HOH A 142 1257 142 HOH HOH . E 4 HOH A 143 1258 143 HOH HOH . E 4 HOH A 144 1259 144 HOH HOH . E 4 HOH A 145 1260 145 HOH HOH . E 4 HOH A 146 1261 146 HOH HOH . E 4 HOH A 147 1262 147 HOH HOH . E 4 HOH A 148 1263 148 HOH HOH . E 4 HOH A 149 1264 149 HOH HOH . E 4 HOH A 150 1265 150 HOH HOH . E 4 HOH A 151 1266 151 HOH HOH . E 4 HOH A 152 1267 152 HOH HOH . E 4 HOH A 153 1268 153 HOH HOH . E 4 HOH A 154 1269 154 HOH HOH . E 4 HOH A 155 1270 155 HOH HOH . E 4 HOH A 156 1271 156 HOH HOH . E 4 HOH A 157 1272 157 HOH HOH . E 4 HOH A 158 1273 158 HOH HOH . E 4 HOH A 159 1274 159 HOH HOH . E 4 HOH A 160 1275 160 HOH HOH . E 4 HOH A 161 1276 161 HOH HOH . E 4 HOH A 162 1277 162 HOH HOH . E 4 HOH A 163 1278 163 HOH HOH . E 4 HOH A 164 1279 164 HOH HOH . E 4 HOH A 165 1280 165 HOH HOH . E 4 HOH A 166 1281 166 HOH HOH . E 4 HOH A 167 1282 167 HOH HOH . E 4 HOH A 168 1283 168 HOH HOH . E 4 HOH A 169 1284 169 HOH HOH . E 4 HOH A 170 1285 170 HOH HOH . E 4 HOH A 171 1286 171 HOH HOH . E 4 HOH A 172 1287 172 HOH HOH . E 4 HOH A 173 1288 173 HOH HOH . E 4 HOH A 174 1289 174 HOH HOH . E 4 HOH A 175 1290 175 HOH HOH . E 4 HOH A 176 1291 176 HOH HOH . E 4 HOH A 177 1292 177 HOH HOH . E 4 HOH A 178 1293 178 HOH HOH . E 4 HOH A 179 1294 179 HOH HOH . E 4 HOH A 180 1295 180 HOH HOH . E 4 HOH A 181 1296 181 HOH HOH . E 4 HOH A 182 1297 182 HOH HOH . E 4 HOH A 183 1298 183 HOH HOH . E 4 HOH A 184 1299 184 HOH HOH . E 4 HOH A 185 1300 185 HOH HOH . E 4 HOH A 186 1301 186 HOH HOH . E 4 HOH A 187 1302 187 HOH HOH . E 4 HOH A 188 1303 188 HOH HOH . E 4 HOH A 189 1304 189 HOH HOH . E 4 HOH A 190 1305 190 HOH HOH . E 4 HOH A 191 1306 191 HOH HOH . E 4 HOH A 192 1307 192 HOH HOH . E 4 HOH A 193 1308 193 HOH HOH . E 4 HOH A 194 1309 194 HOH HOH . E 4 HOH A 195 1310 195 HOH HOH . E 4 HOH A 196 1311 196 HOH HOH . E 4 HOH A 197 1312 197 HOH HOH . E 4 HOH A 198 1313 198 HOH HOH . E 4 HOH A 199 1314 199 HOH HOH . E 4 HOH A 200 1315 200 HOH HOH . E 4 HOH A 201 1316 201 HOH HOH . E 4 HOH A 202 1317 202 HOH HOH . E 4 HOH A 203 1318 203 HOH HOH . E 4 HOH A 204 1319 204 HOH HOH . E 4 HOH A 205 1320 205 HOH HOH . E 4 HOH A 206 1321 206 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -36.908 _atom_site.Cartn_y 25.395 _atom_site.Cartn_z 34.001 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #