data_1ZDU
#
_model_server_result.job_id            o2gzfHg8zH7jynYRoqTARg 
_model_server_result.datetime_utc      '2024-11-24 05:38:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1zdu 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":103}' 
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_entry.id    1ZDU 
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_exptl.entry_id    1ZDU 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              122.143 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ZDU 
_cell.length_a            61.01 
_cell.length_b            67 
_cell.length_c            78.21 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 1ZDU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H12 N O3 1' 
_chem_comp.formula_weight    122.143 
_chem_comp.id                TRS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TRIS BUFFER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C C1 TRS sing 469 n n 
C C2 TRS sing 470 n n 
C C3 TRS sing 471 n n 
C N TRS sing 472 n n 
C1 O1 TRS sing 473 n n 
C1 H11 TRS sing 474 n n 
C1 H12 TRS sing 475 n n 
C2 O2 TRS sing 476 n n 
C2 H21 TRS sing 477 n n 
C2 H22 TRS sing 478 n n 
C3 O3 TRS sing 479 n n 
C3 H31 TRS sing 480 n n 
C3 H32 TRS sing 481 n n 
N HN1 TRS sing 482 n n 
N HN2 TRS sing 483 n n 
N HN3 TRS sing 484 n n 
O1 HO1 TRS sing 485 n n 
O2 HO2 TRS sing 486 n n 
O3 HO3 TRS sing 487 n n 
#
_atom_sites.entry_id                     1ZDU 
_atom_sites.fract_transf_matrix[1][1]    0.016391 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014925 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012786 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 P3A A 1 101 1 P3A PPA . 
E 4 TRS A 1 103 3 TRS TRS . 
F 5 HOH A 1 1 1 HOH HOH . 
F 5 HOH A 2 2 2 HOH HOH . 
F 5 HOH A 3 3 3 HOH HOH . 
F 5 HOH A 4 4 4 HOH HOH . 
F 5 HOH A 5 5 5 HOH HOH . 
F 5 HOH A 6 6 6 HOH HOH . 
F 5 HOH A 7 7 7 HOH HOH . 
F 5 HOH A 8 8 8 HOH HOH . 
F 5 HOH A 9 9 9 HOH HOH . 
F 5 HOH A 10 10 10 HOH HOH . 
F 5 HOH A 11 11 11 HOH HOH . 
F 5 HOH A 12 12 12 HOH HOH . 
F 5 HOH A 13 13 13 HOH HOH . 
F 5 HOH A 14 14 14 HOH HOH . 
F 5 HOH A 15 15 15 HOH HOH . 
F 5 HOH A 16 16 16 HOH HOH . 
F 5 HOH A 17 17 17 HOH HOH . 
F 5 HOH A 18 18 18 HOH HOH . 
F 5 HOH A 19 19 19 HOH HOH . 
F 5 HOH A 20 20 20 HOH HOH . 
F 5 HOH A 21 21 21 HOH HOH . 
F 5 HOH A 22 22 22 HOH HOH . 
F 5 HOH A 23 23 23 HOH HOH . 
F 5 HOH A 24 24 24 HOH HOH . 
F 5 HOH A 25 25 25 HOH HOH . 
F 5 HOH A 26 26 26 HOH HOH . 
F 5 HOH A 27 27 27 HOH HOH . 
F 5 HOH A 28 28 28 HOH HOH . 
F 5 HOH A 29 29 29 HOH HOH . 
F 5 HOH A 30 30 30 HOH HOH . 
F 5 HOH A 31 37 37 HOH HOH . 
G 5 HOH P 1 31 31 HOH HOH . 
G 5 HOH P 2 32 32 HOH HOH . 
G 5 HOH P 3 33 33 HOH HOH . 
H 5 HOH Q 1 34 34 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C TRS . . . E 4 10.156 31.81 3.223 1 41.88 ? C TRS 103 A 1 
HETATM 2 C C1 TRS . . . E 4 9.766 32.667 2.012 1 42.24 ? C1 TRS 103 A 1 
HETATM 3 C C2 TRS . . . E 4 11.367 32.385 3.945 1 41.73 ? C2 TRS 103 A 1 
HETATM 4 C C3 TRS . . . E 4 10.479 30.376 2.803 1 41.84 ? C3 TRS 103 A 1 
HETATM 5 N N TRS . . . E 4 9.04 31.825 4.173 1 42.35 ? N TRS 103 A 1 
HETATM 6 O O1 TRS . . . E 4 8.431 32.437 1.595 1 42.95 ? O1 TRS 103 A 1 
HETATM 7 O O2 TRS . . . E 4 11.291 32.06 5.319 1 41.98 ? O2 TRS 103 A 1 
HETATM 8 O O3 TRS . . . E 4 9.347 29.715 2.255 1 42.27 ? O3 TRS 103 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
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