data_1ZE8 # _model_server_result.job_id G1JnTb_cLGj9hNb7prww-A _model_server_result.datetime_utc '2024-12-21 14:55:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ze8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1}' # _entry.id 1ZE8 # _exptl.entry_id 1ZE8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 305.415 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-{2-[4-(AMINOSULFONYL)PHENYL]ETHYL}-2,4,6-TRIMETHYLPYRIDINIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.29 _cell.angle_gamma 90 _cell.entry_id 1ZE8 _cell.length_a 42.17 _cell.length_b 41.39 _cell.length_c 72.04 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZE8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D N1 PIU . A PIU 1 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc2 A NE2 HIS 93 A HIS 94 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc3 A NE2 HIS 95 A HIS 96 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc4 A ND1 HIS 118 A HIS 119 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc5 A O GLN 135 A GLN 137 1_555 C HG HGB . A HGB 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? metalc ? metalc6 A SG CYS 204 A CYS 206 1_555 C HG HGB . A HGB 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc7 C HG HGB . A HGB 262 1_555 F O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? # _chem_comp.formula 'C16 H21 N2 O2 S 1' _chem_comp.formula_weight 305.415 _chem_comp.id PIU _chem_comp.mon_nstd_flag . _chem_comp.name 1-{2-[4-(AMINOSULFONYL)PHENYL]ETHYL}-2,4,6-TRIMETHYLPYRIDINIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-N-(4-SULFAMOYLPHENYL-ETHYL)-2,4,6-TRIMETHYLPYRIDINIUM # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 O1 PIU doub 290 n n S1 O2 PIU doub 291 n n S1 N1 PIU sing 292 n n S1 C5 PIU sing 293 n n N1 HN11 PIU sing 294 n n N1 HN12 PIU sing 295 n n C1 C6 PIU doub 296 n y C1 C2 PIU sing 297 n y C1 H1 PIU sing 298 n n C3 C4 PIU sing 299 n y C3 C2 PIU doub 300 n y C3 H3 PIU sing 301 n n C4 C5 PIU doub 302 n y C4 H4 PIU sing 303 n n C6 C5 PIU sing 304 n y C6 H6 PIU sing 305 n n C2 C15 PIU sing 306 n n C15 C16 PIU sing 307 n n C15 H151 PIU sing 308 n n C15 H152 PIU sing 309 n n C16 N2 PIU sing 310 n n C16 H161 PIU sing 311 n n C16 H162 PIU sing 312 n n N2 C10 PIU doub 313 n y N2 C11 PIU sing 314 n y C7 C11 PIU doub 315 n y C7 C8 PIU sing 316 n y C7 H7 PIU sing 317 n n C9 C10 PIU sing 318 n y C9 C8 PIU doub 319 n y C9 H9 PIU sing 320 n n C10 C14 PIU sing 321 n n C11 C13 PIU sing 322 n n C8 C12 PIU sing 323 n n C12 H121 PIU sing 324 n n C12 H122 PIU sing 325 n n C12 H123 PIU sing 326 n n C13 H131 PIU sing 327 n n C13 H132 PIU sing 328 n n C13 H133 PIU sing 329 n n C14 H141 PIU sing 330 n n C14 H142 PIU sing 331 n n C14 H143 PIU sing 332 n n # _atom_sites.entry_id 1ZE8 _atom_sites.fract_transf_matrix[1][1] 0.023714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006039 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014324 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 263 263 ZN ZN2 . C 3 HGB A 1 262 262 HGB PHG . D 4 PIU A 1 1 1 PIU PIR . E 5 GOL A 1 700 700 GOL GOL . F 6 HOH A 1 300 300 HOH HOH . F 6 HOH A 2 301 301 HOH HOH . F 6 HOH A 3 302 302 HOH HOH . F 6 HOH A 4 303 303 HOH HOH . F 6 HOH A 5 304 304 HOH HOH . F 6 HOH A 6 305 305 HOH HOH . F 6 HOH A 7 306 306 HOH HOH . F 6 HOH A 8 307 307 HOH HOH . F 6 HOH A 9 308 308 HOH HOH . F 6 HOH A 10 309 309 HOH HOH . F 6 HOH A 11 310 310 HOH HOH . F 6 HOH A 12 311 311 HOH HOH . F 6 HOH A 13 312 312 HOH HOH . F 6 HOH A 14 313 313 HOH HOH . F 6 HOH A 15 314 314 HOH HOH . F 6 HOH A 16 315 315 HOH HOH . F 6 HOH A 17 316 316 HOH HOH . F 6 HOH A 18 317 317 HOH HOH . F 6 HOH A 19 318 318 HOH HOH . F 6 HOH A 20 319 319 HOH HOH . F 6 HOH A 21 320 320 HOH HOH . F 6 HOH A 22 321 321 HOH HOH . F 6 HOH A 23 322 322 HOH HOH . F 6 HOH A 24 323 323 HOH HOH . F 6 HOH A 25 324 324 HOH HOH . F 6 HOH A 26 325 325 HOH HOH . F 6 HOH A 27 326 326 HOH HOH . F 6 HOH A 28 327 327 HOH HOH . F 6 HOH A 29 328 328 HOH HOH . F 6 HOH A 30 329 329 HOH HOH . F 6 HOH A 31 330 330 HOH HOH . F 6 HOH A 32 331 331 HOH HOH . F 6 HOH A 33 332 332 HOH HOH . F 6 HOH A 34 333 333 HOH HOH . F 6 HOH A 35 334 334 HOH HOH . F 6 HOH A 36 335 335 HOH HOH . F 6 HOH A 37 336 336 HOH HOH . F 6 HOH A 38 337 337 HOH HOH . F 6 HOH A 39 338 338 HOH HOH . F 6 HOH A 40 339 339 HOH HOH . F 6 HOH A 41 340 340 HOH HOH . F 6 HOH A 42 341 341 HOH HOH . F 6 HOH A 43 342 342 HOH HOH . F 6 HOH A 44 343 343 HOH HOH . F 6 HOH A 45 344 344 HOH HOH . F 6 HOH A 46 345 345 HOH HOH . F 6 HOH A 47 346 346 HOH HOH . F 6 HOH A 48 347 347 HOH HOH . F 6 HOH A 49 348 348 HOH HOH . F 6 HOH A 50 349 349 HOH HOH . F 6 HOH A 51 350 350 HOH HOH . F 6 HOH A 52 351 351 HOH HOH . F 6 HOH A 53 352 352 HOH HOH . F 6 HOH A 54 353 353 HOH HOH . F 6 HOH A 55 354 354 HOH HOH . F 6 HOH A 56 355 355 HOH HOH . F 6 HOH A 57 356 356 HOH HOH . F 6 HOH A 58 357 357 HOH HOH . F 6 HOH A 59 358 358 HOH HOH . F 6 HOH A 60 359 359 HOH HOH . F 6 HOH A 61 360 360 HOH HOH . F 6 HOH A 62 361 361 HOH HOH . F 6 HOH A 63 362 362 HOH HOH . F 6 HOH A 64 363 363 HOH HOH . F 6 HOH A 65 364 364 HOH HOH . F 6 HOH A 66 365 365 HOH HOH . F 6 HOH A 67 366 366 HOH HOH . F 6 HOH A 68 367 367 HOH HOH . F 6 HOH A 69 368 368 HOH HOH . F 6 HOH A 70 369 369 HOH HOH . F 6 HOH A 71 370 370 HOH HOH . F 6 HOH A 72 371 371 HOH HOH . F 6 HOH A 73 372 372 HOH HOH . F 6 HOH A 74 373 373 HOH HOH . F 6 HOH A 75 374 374 HOH HOH . F 6 HOH A 76 375 375 HOH HOH . F 6 HOH A 77 376 376 HOH HOH . F 6 HOH A 78 377 377 HOH HOH . F 6 HOH A 79 378 378 HOH HOH . F 6 HOH A 80 379 379 HOH HOH . F 6 HOH A 81 380 380 HOH HOH . F 6 HOH A 82 381 381 HOH HOH . F 6 HOH A 83 382 382 HOH HOH . F 6 HOH A 84 383 383 HOH HOH . F 6 HOH A 85 384 384 HOH HOH . F 6 HOH A 86 385 385 HOH HOH . F 6 HOH A 87 386 386 HOH HOH . F 6 HOH A 88 387 387 HOH HOH . F 6 HOH A 89 388 388 HOH HOH . F 6 HOH A 90 389 389 HOH HOH . F 6 HOH A 91 390 390 HOH HOH . F 6 HOH A 92 391 391 HOH HOH . F 6 HOH A 93 392 392 HOH HOH . F 6 HOH A 94 393 393 HOH HOH . F 6 HOH A 95 394 394 HOH HOH . F 6 HOH A 96 395 395 HOH HOH . F 6 HOH A 97 396 396 HOH HOH . F 6 HOH A 98 397 397 HOH HOH . F 6 HOH A 99 398 398 HOH HOH . F 6 HOH A 100 399 399 HOH HOH . F 6 HOH A 101 400 400 HOH HOH . F 6 HOH A 102 401 401 HOH HOH . F 6 HOH A 103 402 402 HOH HOH . F 6 HOH A 104 403 403 HOH HOH . F 6 HOH A 105 404 404 HOH HOH . F 6 HOH A 106 405 405 HOH HOH . F 6 HOH A 107 406 406 HOH HOH . F 6 HOH A 108 407 407 HOH HOH . F 6 HOH A 109 408 408 HOH HOH . F 6 HOH A 110 409 409 HOH HOH . F 6 HOH A 111 410 410 HOH HOH . F 6 HOH A 112 411 411 HOH HOH . F 6 HOH A 113 412 412 HOH HOH . F 6 HOH A 114 413 413 HOH HOH . F 6 HOH A 115 414 414 HOH HOH . F 6 HOH A 116 415 415 HOH HOH . F 6 HOH A 117 416 416 HOH HOH . F 6 HOH A 118 417 417 HOH HOH . F 6 HOH A 119 418 418 HOH HOH . F 6 HOH A 120 419 419 HOH HOH . F 6 HOH A 121 420 420 HOH HOH . F 6 HOH A 122 421 421 HOH HOH . F 6 HOH A 123 422 422 HOH HOH . F 6 HOH A 124 423 423 HOH HOH . F 6 HOH A 125 424 424 HOH HOH . F 6 HOH A 126 425 425 HOH HOH . F 6 HOH A 127 426 426 HOH HOH . F 6 HOH A 128 427 427 HOH HOH . F 6 HOH A 129 428 428 HOH HOH . F 6 HOH A 130 429 429 HOH HOH . F 6 HOH A 131 430 430 HOH HOH . F 6 HOH A 132 431 431 HOH HOH . F 6 HOH A 133 432 432 HOH HOH . F 6 HOH A 134 433 433 HOH HOH . F 6 HOH A 135 434 434 HOH HOH . F 6 HOH A 136 435 435 HOH HOH . F 6 HOH A 137 436 436 HOH HOH . F 6 HOH A 138 437 437 HOH HOH . F 6 HOH A 139 438 438 HOH HOH . F 6 HOH A 140 439 439 HOH HOH . F 6 HOH A 141 440 440 HOH HOH . F 6 HOH A 142 441 441 HOH HOH . F 6 HOH A 143 442 442 HOH HOH . F 6 HOH A 144 443 443 HOH HOH . F 6 HOH A 145 444 444 HOH HOH . F 6 HOH A 146 445 445 HOH HOH . F 6 HOH A 147 446 446 HOH HOH . F 6 HOH A 148 447 447 HOH HOH . F 6 HOH A 149 448 448 HOH HOH . F 6 HOH A 150 449 449 HOH HOH . F 6 HOH A 151 450 450 HOH HOH . F 6 HOH A 152 451 451 HOH HOH . F 6 HOH A 153 452 452 HOH HOH . F 6 HOH A 154 453 453 HOH HOH . F 6 HOH A 155 454 454 HOH HOH . F 6 HOH A 156 455 455 HOH HOH . F 6 HOH A 157 456 456 HOH HOH . F 6 HOH A 158 457 457 HOH HOH . F 6 HOH A 159 458 458 HOH HOH . F 6 HOH A 160 459 459 HOH HOH . F 6 HOH A 161 460 460 HOH HOH . F 6 HOH A 162 461 461 HOH HOH . F 6 HOH A 163 462 462 HOH HOH . F 6 HOH A 164 463 463 HOH HOH . F 6 HOH A 165 464 464 HOH HOH . F 6 HOH A 166 465 465 HOH HOH . F 6 HOH A 167 466 466 HOH HOH . F 6 HOH A 168 467 467 HOH HOH . F 6 HOH A 169 468 468 HOH HOH . F 6 HOH A 170 469 469 HOH HOH . F 6 HOH A 171 470 470 HOH HOH . F 6 HOH A 172 471 471 HOH HOH . F 6 HOH A 173 472 472 HOH HOH . F 6 HOH A 174 473 473 HOH HOH . F 6 HOH A 175 474 474 HOH HOH . F 6 HOH A 176 475 475 HOH HOH . F 6 HOH A 177 476 476 HOH HOH . F 6 HOH A 178 477 477 HOH HOH . F 6 HOH A 179 478 478 HOH HOH . F 6 HOH A 180 479 479 HOH HOH . F 6 HOH A 181 480 480 HOH HOH . F 6 HOH A 182 481 481 HOH HOH . F 6 HOH A 183 482 482 HOH HOH . F 6 HOH A 184 483 483 HOH HOH . F 6 HOH A 185 484 484 HOH HOH . F 6 HOH A 186 485 485 HOH HOH . F 6 HOH A 187 486 486 HOH HOH . F 6 HOH A 188 487 487 HOH HOH . F 6 HOH A 189 488 488 HOH HOH . F 6 HOH A 190 489 489 HOH HOH . F 6 HOH A 191 490 490 HOH HOH . F 6 HOH A 192 491 491 HOH HOH . F 6 HOH A 193 492 492 HOH HOH . F 6 HOH A 194 493 493 HOH HOH . F 6 HOH A 195 494 494 HOH HOH . F 6 HOH A 196 495 495 HOH HOH . F 6 HOH A 197 496 496 HOH HOH . F 6 HOH A 198 497 497 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 PIU . . . D 4 -5.926 1.047 16.731 1 12.66 ? S1 PIU 1 A 1 HETATM 2 O O1 PIU . . . D 4 -5.318 1.137 18.051 1 10.95 ? O1 PIU 1 A 1 HETATM 3 O O2 PIU . . . D 4 -7.36 0.951 16.622 1 12.04 ? O2 PIU 1 A 1 HETATM 4 N N1 PIU . . . D 4 -5.32 -0.251 16.054 1 10.89 ? N1 PIU 1 A 1 HETATM 5 C C1 PIU . . . D 4 -5.873 4.828 15.017 1 17.77 ? C1 PIU 1 A 1 HETATM 6 C C3 PIU . . . D 4 -3.623 3.839 14.628 1 19.68 ? C3 PIU 1 A 1 HETATM 7 C C4 PIU . . . D 4 -4.053 2.626 15.288 1 18.88 ? C4 PIU 1 A 1 HETATM 8 C C6 PIU . . . D 4 -6.293 3.632 15.668 1 15.81 ? C6 PIU 1 A 1 HETATM 9 C C2 PIU . . . D 4 -4.547 4.936 14.497 1 21.3 ? C2 PIU 1 A 1 HETATM 10 C C5 PIU . . . D 4 -5.392 2.525 15.804 1 15.71 ? C5 PIU 1 A 1 HETATM 11 C C15 PIU . . . D 4 -4.122 6.218 13.816 1 23.42 ? C15 PIU 1 A 1 HETATM 12 C C16 PIU . . . D 4 -4.614 6.39 12.381 1 28.27 ? C16 PIU 1 A 1 HETATM 13 N N2 PIU . . . D 4 -4.625 7.833 11.907 1 30.93 ? N2 PIU 1 A 1 HETATM 14 C C7 PIU . . . D 4 -3.439 9.846 11.077 1 33.77 ? C7 PIU 1 A 1 HETATM 15 C C9 PIU . . . D 4 -5.916 9.862 11.338 1 33.86 ? C9 PIU 1 A 1 HETATM 16 C C10 PIU . . . D 4 -5.885 8.523 11.805 1 31.99 ? C10 PIU 1 A 1 HETATM 17 C C11 PIU . . . D 4 -3.393 8.501 11.54 1 32.34 ? C11 PIU 1 A 1 HETATM 18 C C8 PIU . . . D 4 -4.699 10.511 10.983 1 34.09 ? C8 PIU 1 A 1 HETATM 19 C C12 PIU . . . D 4 -4.751 11.94 10.533 1 34.65 ? C12 PIU 1 A 1 HETATM 20 C C13 PIU . . . D 4 -1.993 7.911 11.597 1 32.44 ? C13 PIU 1 A 1 HETATM 21 C C14 PIU . . . D 4 -7.229 7.944 12.183 1 34.39 ? C14 PIU 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 466 _model_server_stats.encode_time_ms 33 _model_server_stats.element_count 21 #