data_1ZE8
#
_model_server_result.job_id            J4rnhwwlY28ITyfYTSlc_g 
_model_server_result.datetime_utc      '2024-10-18 16:24:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ze8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":700}' 
#
_entry.id    1ZE8 
#
_exptl.entry_id    1ZE8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.29 
_cell.angle_gamma         90 
_cell.entry_id            1ZE8 
_cell.length_a            42.17 
_cell.length_b            41.39 
_cell.length_c            72.04 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZE8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D N1 PIU . A PIU 1 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc2 A NE2 HIS 93 A HIS 94 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc3 A NE2 HIS 95 A HIS 96 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? 
metalc ? metalc4 A ND1 HIS 118 A HIS 119 1_555 B ZN ZN . A ZN 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc5 A O GLN 135 A GLN 137 1_555 C HG HGB . A HGB 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? 
metalc ? metalc6 A SG CYS 204 A CYS 206 1_555 C HG HGB . A HGB 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc7 C HG HGB . A HGB 262 1_555 F O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.892 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     1ZE8 
_atom_sites.fract_transf_matrix[1][1]    0.023714 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006039 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02416 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014324 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 263 263 ZN ZN2 . 
C 3 HGB A 1 262 262 HGB PHG . 
D 4 PIU A 1 1 1 PIU PIR . 
E 5 GOL A 1 700 700 GOL GOL . 
F 6 HOH A 1 300 300 HOH HOH . 
F 6 HOH A 2 301 301 HOH HOH . 
F 6 HOH A 3 302 302 HOH HOH . 
F 6 HOH A 4 303 303 HOH HOH . 
F 6 HOH A 5 304 304 HOH HOH . 
F 6 HOH A 6 305 305 HOH HOH . 
F 6 HOH A 7 306 306 HOH HOH . 
F 6 HOH A 8 307 307 HOH HOH . 
F 6 HOH A 9 308 308 HOH HOH . 
F 6 HOH A 10 309 309 HOH HOH . 
F 6 HOH A 11 310 310 HOH HOH . 
F 6 HOH A 12 311 311 HOH HOH . 
F 6 HOH A 13 312 312 HOH HOH . 
F 6 HOH A 14 313 313 HOH HOH . 
F 6 HOH A 15 314 314 HOH HOH . 
F 6 HOH A 16 315 315 HOH HOH . 
F 6 HOH A 17 316 316 HOH HOH . 
F 6 HOH A 18 317 317 HOH HOH . 
F 6 HOH A 19 318 318 HOH HOH . 
F 6 HOH A 20 319 319 HOH HOH . 
F 6 HOH A 21 320 320 HOH HOH . 
F 6 HOH A 22 321 321 HOH HOH . 
F 6 HOH A 23 322 322 HOH HOH . 
F 6 HOH A 24 323 323 HOH HOH . 
F 6 HOH A 25 324 324 HOH HOH . 
F 6 HOH A 26 325 325 HOH HOH . 
F 6 HOH A 27 326 326 HOH HOH . 
F 6 HOH A 28 327 327 HOH HOH . 
F 6 HOH A 29 328 328 HOH HOH . 
F 6 HOH A 30 329 329 HOH HOH . 
F 6 HOH A 31 330 330 HOH HOH . 
F 6 HOH A 32 331 331 HOH HOH . 
F 6 HOH A 33 332 332 HOH HOH . 
F 6 HOH A 34 333 333 HOH HOH . 
F 6 HOH A 35 334 334 HOH HOH . 
F 6 HOH A 36 335 335 HOH HOH . 
F 6 HOH A 37 336 336 HOH HOH . 
F 6 HOH A 38 337 337 HOH HOH . 
F 6 HOH A 39 338 338 HOH HOH . 
F 6 HOH A 40 339 339 HOH HOH . 
F 6 HOH A 41 340 340 HOH HOH . 
F 6 HOH A 42 341 341 HOH HOH . 
F 6 HOH A 43 342 342 HOH HOH . 
F 6 HOH A 44 343 343 HOH HOH . 
F 6 HOH A 45 344 344 HOH HOH . 
F 6 HOH A 46 345 345 HOH HOH . 
F 6 HOH A 47 346 346 HOH HOH . 
F 6 HOH A 48 347 347 HOH HOH . 
F 6 HOH A 49 348 348 HOH HOH . 
F 6 HOH A 50 349 349 HOH HOH . 
F 6 HOH A 51 350 350 HOH HOH . 
F 6 HOH A 52 351 351 HOH HOH . 
F 6 HOH A 53 352 352 HOH HOH . 
F 6 HOH A 54 353 353 HOH HOH . 
F 6 HOH A 55 354 354 HOH HOH . 
F 6 HOH A 56 355 355 HOH HOH . 
F 6 HOH A 57 356 356 HOH HOH . 
F 6 HOH A 58 357 357 HOH HOH . 
F 6 HOH A 59 358 358 HOH HOH . 
F 6 HOH A 60 359 359 HOH HOH . 
F 6 HOH A 61 360 360 HOH HOH . 
F 6 HOH A 62 361 361 HOH HOH . 
F 6 HOH A 63 362 362 HOH HOH . 
F 6 HOH A 64 363 363 HOH HOH . 
F 6 HOH A 65 364 364 HOH HOH . 
F 6 HOH A 66 365 365 HOH HOH . 
F 6 HOH A 67 366 366 HOH HOH . 
F 6 HOH A 68 367 367 HOH HOH . 
F 6 HOH A 69 368 368 HOH HOH . 
F 6 HOH A 70 369 369 HOH HOH . 
F 6 HOH A 71 370 370 HOH HOH . 
F 6 HOH A 72 371 371 HOH HOH . 
F 6 HOH A 73 372 372 HOH HOH . 
F 6 HOH A 74 373 373 HOH HOH . 
F 6 HOH A 75 374 374 HOH HOH . 
F 6 HOH A 76 375 375 HOH HOH . 
F 6 HOH A 77 376 376 HOH HOH . 
F 6 HOH A 78 377 377 HOH HOH . 
F 6 HOH A 79 378 378 HOH HOH . 
F 6 HOH A 80 379 379 HOH HOH . 
F 6 HOH A 81 380 380 HOH HOH . 
F 6 HOH A 82 381 381 HOH HOH . 
F 6 HOH A 83 382 382 HOH HOH . 
F 6 HOH A 84 383 383 HOH HOH . 
F 6 HOH A 85 384 384 HOH HOH . 
F 6 HOH A 86 385 385 HOH HOH . 
F 6 HOH A 87 386 386 HOH HOH . 
F 6 HOH A 88 387 387 HOH HOH . 
F 6 HOH A 89 388 388 HOH HOH . 
F 6 HOH A 90 389 389 HOH HOH . 
F 6 HOH A 91 390 390 HOH HOH . 
F 6 HOH A 92 391 391 HOH HOH . 
F 6 HOH A 93 392 392 HOH HOH . 
F 6 HOH A 94 393 393 HOH HOH . 
F 6 HOH A 95 394 394 HOH HOH . 
F 6 HOH A 96 395 395 HOH HOH . 
F 6 HOH A 97 396 396 HOH HOH . 
F 6 HOH A 98 397 397 HOH HOH . 
F 6 HOH A 99 398 398 HOH HOH . 
F 6 HOH A 100 399 399 HOH HOH . 
F 6 HOH A 101 400 400 HOH HOH . 
F 6 HOH A 102 401 401 HOH HOH . 
F 6 HOH A 103 402 402 HOH HOH . 
F 6 HOH A 104 403 403 HOH HOH . 
F 6 HOH A 105 404 404 HOH HOH . 
F 6 HOH A 106 405 405 HOH HOH . 
F 6 HOH A 107 406 406 HOH HOH . 
F 6 HOH A 108 407 407 HOH HOH . 
F 6 HOH A 109 408 408 HOH HOH . 
F 6 HOH A 110 409 409 HOH HOH . 
F 6 HOH A 111 410 410 HOH HOH . 
F 6 HOH A 112 411 411 HOH HOH . 
F 6 HOH A 113 412 412 HOH HOH . 
F 6 HOH A 114 413 413 HOH HOH . 
F 6 HOH A 115 414 414 HOH HOH . 
F 6 HOH A 116 415 415 HOH HOH . 
F 6 HOH A 117 416 416 HOH HOH . 
F 6 HOH A 118 417 417 HOH HOH . 
F 6 HOH A 119 418 418 HOH HOH . 
F 6 HOH A 120 419 419 HOH HOH . 
F 6 HOH A 121 420 420 HOH HOH . 
F 6 HOH A 122 421 421 HOH HOH . 
F 6 HOH A 123 422 422 HOH HOH . 
F 6 HOH A 124 423 423 HOH HOH . 
F 6 HOH A 125 424 424 HOH HOH . 
F 6 HOH A 126 425 425 HOH HOH . 
F 6 HOH A 127 426 426 HOH HOH . 
F 6 HOH A 128 427 427 HOH HOH . 
F 6 HOH A 129 428 428 HOH HOH . 
F 6 HOH A 130 429 429 HOH HOH . 
F 6 HOH A 131 430 430 HOH HOH . 
F 6 HOH A 132 431 431 HOH HOH . 
F 6 HOH A 133 432 432 HOH HOH . 
F 6 HOH A 134 433 433 HOH HOH . 
F 6 HOH A 135 434 434 HOH HOH . 
F 6 HOH A 136 435 435 HOH HOH . 
F 6 HOH A 137 436 436 HOH HOH . 
F 6 HOH A 138 437 437 HOH HOH . 
F 6 HOH A 139 438 438 HOH HOH . 
F 6 HOH A 140 439 439 HOH HOH . 
F 6 HOH A 141 440 440 HOH HOH . 
F 6 HOH A 142 441 441 HOH HOH . 
F 6 HOH A 143 442 442 HOH HOH . 
F 6 HOH A 144 443 443 HOH HOH . 
F 6 HOH A 145 444 444 HOH HOH . 
F 6 HOH A 146 445 445 HOH HOH . 
F 6 HOH A 147 446 446 HOH HOH . 
F 6 HOH A 148 447 447 HOH HOH . 
F 6 HOH A 149 448 448 HOH HOH . 
F 6 HOH A 150 449 449 HOH HOH . 
F 6 HOH A 151 450 450 HOH HOH . 
F 6 HOH A 152 451 451 HOH HOH . 
F 6 HOH A 153 452 452 HOH HOH . 
F 6 HOH A 154 453 453 HOH HOH . 
F 6 HOH A 155 454 454 HOH HOH . 
F 6 HOH A 156 455 455 HOH HOH . 
F 6 HOH A 157 456 456 HOH HOH . 
F 6 HOH A 158 457 457 HOH HOH . 
F 6 HOH A 159 458 458 HOH HOH . 
F 6 HOH A 160 459 459 HOH HOH . 
F 6 HOH A 161 460 460 HOH HOH . 
F 6 HOH A 162 461 461 HOH HOH . 
F 6 HOH A 163 462 462 HOH HOH . 
F 6 HOH A 164 463 463 HOH HOH . 
F 6 HOH A 165 464 464 HOH HOH . 
F 6 HOH A 166 465 465 HOH HOH . 
F 6 HOH A 167 466 466 HOH HOH . 
F 6 HOH A 168 467 467 HOH HOH . 
F 6 HOH A 169 468 468 HOH HOH . 
F 6 HOH A 170 469 469 HOH HOH . 
F 6 HOH A 171 470 470 HOH HOH . 
F 6 HOH A 172 471 471 HOH HOH . 
F 6 HOH A 173 472 472 HOH HOH . 
F 6 HOH A 174 473 473 HOH HOH . 
F 6 HOH A 175 474 474 HOH HOH . 
F 6 HOH A 176 475 475 HOH HOH . 
F 6 HOH A 177 476 476 HOH HOH . 
F 6 HOH A 178 477 477 HOH HOH . 
F 6 HOH A 179 478 478 HOH HOH . 
F 6 HOH A 180 479 479 HOH HOH . 
F 6 HOH A 181 480 480 HOH HOH . 
F 6 HOH A 182 481 481 HOH HOH . 
F 6 HOH A 183 482 482 HOH HOH . 
F 6 HOH A 184 483 483 HOH HOH . 
F 6 HOH A 185 484 484 HOH HOH . 
F 6 HOH A 186 485 485 HOH HOH . 
F 6 HOH A 187 486 486 HOH HOH . 
F 6 HOH A 188 487 487 HOH HOH . 
F 6 HOH A 189 488 488 HOH HOH . 
F 6 HOH A 190 489 489 HOH HOH . 
F 6 HOH A 191 490 490 HOH HOH . 
F 6 HOH A 192 491 491 HOH HOH . 
F 6 HOH A 193 492 492 HOH HOH . 
F 6 HOH A 194 493 493 HOH HOH . 
F 6 HOH A 195 494 494 HOH HOH . 
F 6 HOH A 196 495 495 HOH HOH . 
F 6 HOH A 197 496 496 HOH HOH . 
F 6 HOH A 198 497 497 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 5 -4.114 -0.143 11.555 1 23.81 ? C1 GOL 700 A 1 
HETATM 2 O O1 GOL . . . E 5 -2.778 -0.617 10.782 1 22.69 ? O1 GOL 700 A 1 
HETATM 3 C C2 GOL . . . E 5 -4.819 0.813 10.797 1 25.07 ? C2 GOL 700 A 1 
HETATM 4 O O2 GOL . . . E 5 -4.86 0.48 9.489 1 22.79 ? O2 GOL 700 A 1 
HETATM 5 C C3 GOL . . . E 5 -4.232 2.071 10.976 1 23.01 ? C3 GOL 700 A 1 
HETATM 6 O O3 GOL . . . E 5 -5.083 3.182 10.176 1 24.47 ? O3 GOL 700 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#