data_1ZEJ
#
_model_server_result.job_id            YJJ23Q5_EvAwobximKcVbQ 
_model_server_result.datetime_utc      '2025-03-05 22:20:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1zej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":283}' 
#
_entry.id    1ZEJ 
#
_exptl.entry_id    1ZEJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              370.436 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1ZEJ 
_cell.length_a            146.331 
_cell.length_b            146.331 
_cell.length_c            62.73 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        177 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 6 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 11_555 -x+y,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C HIS 12 A HIS 0 1_555 A N MSE 13 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale2 A C MSE 13 A MSE 1 1_555 A N LYS 14 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale3 A C LEU 22 A LEU 10 1_555 A N MSE 23 A MSE 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale4 A C MSE 23 A MSE 11 1_555 A N GLY 24 A GLY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale5 A C VAL 77 A VAL 65 1_555 A N MSE 78 A MSE 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale6 A C MSE 78 A MSE 66 1_555 A N GLU 79 A GLU 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale7 A C TRP 130 A TRP 118 1_555 A N MSE 131 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale8 A C MSE 131 A MSE 119 1_555 A N ASN 132 A ASN 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? 
covale ? covale9 A C VAL 136 A VAL 124 1_555 A N MSE 137 A MSE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale10 A C MSE 137 A MSE 125 1_555 A N PRO 138 A PRO 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? 
covale ? covale11 A C ARG 189 A ARG 177 1_555 A N MSE 190 A MSE 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale12 A C MSE 190 A MSE 178 1_555 A N ILE 191 A ILE 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
#
_chem_comp.formula           'C16 H34 O9' 
_chem_comp.formula_weight    370.436 
_chem_comp.id                PE8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 PE8 sing 256 n n 
O1 HO1 PE8 sing 257 n n 
C2 C3 PE8 sing 258 n n 
C2 H21 PE8 sing 259 n n 
C2 H22 PE8 sing 260 n n 
C3 O4 PE8 sing 261 n n 
C3 H31 PE8 sing 262 n n 
C3 H32 PE8 sing 263 n n 
O4 C5 PE8 sing 264 n n 
C5 C6 PE8 sing 265 n n 
C5 H51 PE8 sing 266 n n 
C5 H52 PE8 sing 267 n n 
C6 O7 PE8 sing 268 n n 
C6 H61 PE8 sing 269 n n 
C6 H62 PE8 sing 270 n n 
O7 C8 PE8 sing 271 n n 
C8 C9 PE8 sing 272 n n 
C8 H81 PE8 sing 273 n n 
C8 H82 PE8 sing 274 n n 
C9 O10 PE8 sing 275 n n 
C9 H91 PE8 sing 276 n n 
C9 H92 PE8 sing 277 n n 
O10 C11 PE8 sing 278 n n 
C11 C12 PE8 sing 279 n n 
C11 H111 PE8 sing 280 n n 
C11 H112 PE8 sing 281 n n 
C12 O13 PE8 sing 282 n n 
C12 H121 PE8 sing 283 n n 
C12 H122 PE8 sing 284 n n 
O13 C14 PE8 sing 285 n n 
C14 C15 PE8 sing 286 n n 
C14 H141 PE8 sing 287 n n 
C14 H142 PE8 sing 288 n n 
C15 O16 PE8 sing 289 n n 
C15 H151 PE8 sing 290 n n 
C15 H152 PE8 sing 291 n n 
O16 C17 PE8 sing 292 n n 
C17 C18 PE8 sing 293 n n 
C17 H171 PE8 sing 294 n n 
C17 H172 PE8 sing 295 n n 
C18 O19 PE8 sing 296 n n 
C18 H181 PE8 sing 297 n n 
C18 H182 PE8 sing 298 n n 
O19 C20 PE8 sing 299 n n 
C20 C21 PE8 sing 300 n n 
C20 H201 PE8 sing 301 n n 
C20 H202 PE8 sing 302 n n 
C21 O22 PE8 sing 303 n n 
C21 H211 PE8 sing 304 n n 
C21 H212 PE8 sing 305 n n 
O22 C23 PE8 sing 306 n n 
C23 C24 PE8 sing 307 n n 
C23 H231 PE8 sing 308 n n 
C23 H232 PE8 sing 309 n n 
C24 O25 PE8 sing 310 n n 
C24 H241 PE8 sing 311 n n 
C24 H242 PE8 sing 312 n n 
O25 H25 PE8 sing 313 n n 
#
_atom_sites.entry_id                     1ZEJ 
_atom_sites.fract_transf_matrix[1][1]    0.00683 
_atom_sites.fract_transf_matrix[1][2]    0.00395 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00789 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01594 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CL A 1 282 1 CL CL . 
C 3 PE8 A 1 283 2 PE8 PE8 . 
D 4 HOH A 1 284 3 HOH HOH . 
D 4 HOH A 2 285 4 HOH HOH . 
D 4 HOH A 3 286 5 HOH HOH . 
D 4 HOH A 4 287 6 HOH HOH . 
D 4 HOH A 5 288 7 HOH HOH . 
D 4 HOH A 6 289 8 HOH HOH . 
D 4 HOH A 7 290 9 HOH HOH . 
D 4 HOH A 8 291 10 HOH HOH . 
D 4 HOH A 9 292 11 HOH HOH . 
D 4 HOH A 10 293 12 HOH HOH . 
D 4 HOH A 11 294 13 HOH HOH . 
D 4 HOH A 12 295 14 HOH HOH . 
D 4 HOH A 13 296 15 HOH HOH . 
D 4 HOH A 14 297 16 HOH HOH . 
D 4 HOH A 15 298 17 HOH HOH . 
D 4 HOH A 16 299 18 HOH HOH . 
D 4 HOH A 17 300 19 HOH HOH . 
D 4 HOH A 18 301 20 HOH HOH . 
D 4 HOH A 19 302 21 HOH HOH . 
D 4 HOH A 20 303 22 HOH HOH . 
D 4 HOH A 21 304 23 HOH HOH . 
D 4 HOH A 22 305 24 HOH HOH . 
D 4 HOH A 23 306 25 HOH HOH . 
D 4 HOH A 24 307 26 HOH HOH . 
D 4 HOH A 25 308 27 HOH HOH . 
D 4 HOH A 26 309 28 HOH HOH . 
D 4 HOH A 27 310 29 HOH HOH . 
D 4 HOH A 28 311 30 HOH HOH . 
D 4 HOH A 29 312 31 HOH HOH . 
D 4 HOH A 30 313 32 HOH HOH . 
D 4 HOH A 31 314 33 HOH HOH . 
D 4 HOH A 32 315 34 HOH HOH . 
D 4 HOH A 33 316 35 HOH HOH . 
D 4 HOH A 34 317 36 HOH HOH . 
D 4 HOH A 35 318 37 HOH HOH . 
D 4 HOH A 36 319 38 HOH HOH . 
D 4 HOH A 37 320 39 HOH HOH . 
D 4 HOH A 38 321 40 HOH HOH . 
D 4 HOH A 39 322 41 HOH HOH . 
D 4 HOH A 40 323 42 HOH HOH . 
D 4 HOH A 41 324 43 HOH HOH . 
D 4 HOH A 42 325 44 HOH HOH . 
D 4 HOH A 43 326 45 HOH HOH . 
D 4 HOH A 44 327 46 HOH HOH . 
D 4 HOH A 45 328 47 HOH HOH . 
D 4 HOH A 46 329 48 HOH HOH . 
D 4 HOH A 47 330 49 HOH HOH . 
D 4 HOH A 48 331 50 HOH HOH . 
D 4 HOH A 49 332 51 HOH HOH . 
D 4 HOH A 50 333 52 HOH HOH . 
D 4 HOH A 51 334 53 HOH HOH . 
D 4 HOH A 52 335 54 HOH HOH . 
D 4 HOH A 53 336 55 HOH HOH . 
D 4 HOH A 54 337 56 HOH HOH . 
D 4 HOH A 55 338 57 HOH HOH . 
D 4 HOH A 56 339 58 HOH HOH . 
D 4 HOH A 57 340 59 HOH HOH . 
D 4 HOH A 58 341 60 HOH HOH . 
D 4 HOH A 59 342 61 HOH HOH . 
D 4 HOH A 60 343 62 HOH HOH . 
D 4 HOH A 61 344 63 HOH HOH . 
D 4 HOH A 62 345 64 HOH HOH . 
D 4 HOH A 63 346 65 HOH HOH . 
D 4 HOH A 64 347 66 HOH HOH . 
D 4 HOH A 65 348 67 HOH HOH . 
D 4 HOH A 66 349 68 HOH HOH . 
D 4 HOH A 67 350 69 HOH HOH . 
D 4 HOH A 68 351 70 HOH HOH . 
D 4 HOH A 69 352 71 HOH HOH . 
D 4 HOH A 70 353 72 HOH HOH . 
D 4 HOH A 71 354 73 HOH HOH . 
D 4 HOH A 72 355 74 HOH HOH . 
D 4 HOH A 73 356 75 HOH HOH . 
D 4 HOH A 74 357 76 HOH HOH . 
D 4 HOH A 75 358 77 HOH HOH . 
D 4 HOH A 76 359 78 HOH HOH . 
D 4 HOH A 77 360 79 HOH HOH . 
D 4 HOH A 78 361 80 HOH HOH . 
D 4 HOH A 79 362 81 HOH HOH . 
D 4 HOH A 80 363 82 HOH HOH . 
D 4 HOH A 81 364 83 HOH HOH . 
D 4 HOH A 82 365 84 HOH HOH . 
D 4 HOH A 83 366 85 HOH HOH . 
D 4 HOH A 84 367 86 HOH HOH . 
D 4 HOH A 85 368 87 HOH HOH . 
D 4 HOH A 86 369 88 HOH HOH . 
D 4 HOH A 87 370 89 HOH HOH . 
D 4 HOH A 88 371 90 HOH HOH . 
D 4 HOH A 89 372 91 HOH HOH . 
D 4 HOH A 90 373 92 HOH HOH . 
D 4 HOH A 91 374 93 HOH HOH . 
D 4 HOH A 92 375 94 HOH HOH . 
D 4 HOH A 93 376 95 HOH HOH . 
D 4 HOH A 94 377 96 HOH HOH . 
D 4 HOH A 95 378 97 HOH HOH . 
D 4 HOH A 96 379 98 HOH HOH . 
D 4 HOH A 97 380 99 HOH HOH . 
D 4 HOH A 98 381 100 HOH HOH . 
D 4 HOH A 99 382 101 HOH HOH . 
D 4 HOH A 100 383 102 HOH HOH . 
D 4 HOH A 101 384 103 HOH HOH . 
D 4 HOH A 102 385 104 HOH HOH . 
D 4 HOH A 103 386 105 HOH HOH . 
D 4 HOH A 104 387 106 HOH HOH . 
D 4 HOH A 105 388 107 HOH HOH . 
D 4 HOH A 106 389 108 HOH HOH . 
D 4 HOH A 107 390 109 HOH HOH . 
D 4 HOH A 108 391 110 HOH HOH . 
D 4 HOH A 109 392 111 HOH HOH . 
D 4 HOH A 110 393 112 HOH HOH . 
D 4 HOH A 111 394 113 HOH HOH . 
D 4 HOH A 112 395 114 HOH HOH . 
D 4 HOH A 113 396 115 HOH HOH . 
D 4 HOH A 114 397 116 HOH HOH . 
D 4 HOH A 115 398 117 HOH HOH . 
D 4 HOH A 116 399 118 HOH HOH . 
D 4 HOH A 117 400 119 HOH HOH . 
D 4 HOH A 118 401 120 HOH HOH . 
D 4 HOH A 119 402 121 HOH HOH . 
D 4 HOH A 120 403 122 HOH HOH . 
D 4 HOH A 121 404 123 HOH HOH . 
D 4 HOH A 122 405 124 HOH HOH . 
D 4 HOH A 123 406 125 HOH HOH . 
D 4 HOH A 124 407 126 HOH HOH . 
D 4 HOH A 125 408 127 HOH HOH . 
D 4 HOH A 126 409 128 HOH HOH . 
D 4 HOH A 127 410 129 HOH HOH . 
D 4 HOH A 128 411 130 HOH HOH . 
D 4 HOH A 129 412 131 HOH HOH . 
D 4 HOH A 130 413 132 HOH HOH . 
D 4 HOH A 131 414 133 HOH HOH . 
D 4 HOH A 132 415 134 HOH HOH . 
D 4 HOH A 133 416 135 HOH HOH . 
D 4 HOH A 134 417 136 HOH HOH . 
D 4 HOH A 135 418 137 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PE8 . . . C 3 20.178 42.128 2.835 0.5 42.02 ? O1 PE8 283 A 1 
HETATM 2 C C2 PE8 . . . C 3 18.827 42.233 2.336 0.5 43.93 ? C2 PE8 283 A 1 
HETATM 3 C C3 PE8 . . . C 3 18.213 43.517 2.862 0.5 42.77 ? C3 PE8 283 A 1 
HETATM 4 O O4 PE8 . . . C 3 18.908 44.607 2.246 0.5 44.66 ? O4 PE8 283 A 1 
HETATM 5 C C5 PE8 . . . C 3 18.879 45.824 2.996 0.5 44.45 ? C5 PE8 283 A 1 
HETATM 6 C C6 PE8 . . . C 3 20.118 46.674 2.718 0.5 45.27 ? C6 PE8 283 A 1 
HETATM 7 O O7 PE8 . . . C 3 20.65 46.415 1.413 0.5 43.06 ? O7 PE8 283 A 1 
HETATM 8 C C8 PE8 . . . C 3 21.512 47.473 1.02 0.5 43.52 ? C8 PE8 283 A 1 
HETATM 9 C C9 PE8 . . . C 3 22.523 46.952 0.004 0.5 43.76 ? C9 PE8 283 A 1 
HETATM 10 O O10 PE8 . . . C 3 23.461 46.065 0.625 0.5 42.03 ? O10 PE8 283 A 1 
HETATM 11 C C11 PE8 . . . C 3 24.437 46.726 1.426 0.5 42.76 ? C11 PE8 283 A 1 
HETATM 12 C C12 PE8 . . . C 3 25.625 45.793 1.633 0.5 42.82 ? C12 PE8 283 A 1 
HETATM 13 O O13 PE8 . . . C 3 26.447 45.829 0.46 0.5 43.24 ? O13 PE8 283 A 1 
HETATM 14 C C14 PE8 . . . C 3 26.164 44.773 -0.46 0.5 40.68 ? C14 PE8 283 A 1 
HETATM 15 C C15 PE8 . . . C 3 27.332 44.643 -1.433 0.5 41.63 ? C15 PE8 283 A 1 
HETATM 16 O O16 PE8 . . . C 3 28.044 43.441 -1.142 0.5 40.34 ? O16 PE8 283 A 1 
HETATM 17 C C17 PE8 . . . C 3 29.33 43.573 -0.532 0.5 42.35 ? C17 PE8 283 A 1 
HETATM 18 C C18 PE8 . . . C 3 30.34 42.679 -1.258 0.5 42.48 ? C18 PE8 283 A 1 
HETATM 19 O O19 PE8 . . . C 3 29.84 41.352 -1.436 0.5 42.22 ? O19 PE8 283 A 1 
HETATM 20 C C20 PE8 . . . C 3 30.09 40.871 -2.767 0.5 45.14 ? C20 PE8 283 A 1 
HETATM 21 C C21 PE8 . . . C 3 30.196 39.345 -2.827 0.5 44.47 ? C21 PE8 283 A 1 
HETATM 22 O O22 PE8 . . . C 3 29.109 38.713 -2.143 0.5 45.02 ? O22 PE8 283 A 1 
HETATM 23 C C23 PE8 . . . C 3 28.596 37.545 -2.801 0.5 43.51 ? C23 PE8 283 A 1 
HETATM 24 C C24 PE8 . . . C 3 27.193 37.282 -2.275 0.5 44.74 ? C24 PE8 283 A 1 
HETATM 25 O O25 PE8 . . . C 3 26.271 38.265 -2.796 0.5 43.77 ? O25 PE8 283 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           25 
#