data_1ZGA # _model_server_result.job_id 3r4E95W7UN2JfdaUPVfsZA _model_server_result.datetime_utc '2024-10-12 19:25:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":365}' # _entry.id 1ZGA # _exptl.entry_id 1ZGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.263 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (6AR,12AR)-6H-[1,3]DIOXOLO[5,6][1]BENZOFURO[3,2-C]CHROMENE-3,6A(12AH)-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZGA _cell.length_a 71.217 _cell.length_b 71.217 _cell.length_c 188.907 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_575 x,-y+2,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 142.434 94.4535 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H12 O6' _chem_comp.formula_weight 300.263 _chem_comp.id HMK _chem_comp.mon_nstd_flag . _chem_comp.name (6AR,12AR)-6H-[1,3]DIOXOLO[5,6][1]BENZOFURO[3,2-C]CHROMENE-3,6A(12AH)-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HMK sing 150 n n C1 C5 HMK sing 151 n n C1 H11 HMK sing 152 n n C1 H12A HMK sing 153 n n O1 C2 HMK sing 154 n n C2 C3 HMK sing 155 n y C2 C6 HMK doub 156 n y C3 C4 HMK sing 157 n n C3 C9 HMK doub 158 n y C4 C5 HMK sing 159 n n C4 O2 HMK sing 160 n n C4 H4 HMK sing 161 n n C5 O5 HMK sing 162 n n C5 C11 HMK sing 163 n n C6 C7 HMK sing 164 n y C6 H6 HMK sing 165 n n C7 C8 HMK doub 166 n y C7 O6 HMK sing 167 n n C8 C9 HMK sing 168 n y C8 H8 HMK sing 169 n n C9 H9 HMK sing 170 n n O2 C10 HMK sing 171 n n O5 HO5 HMK sing 172 n n O6 HO6 HMK sing 173 n n C10 C11 HMK sing 174 n y C10 C12 HMK doub 175 n y C11 C15 HMK doub 176 n y C12 C13 HMK sing 177 n y C12 H12 HMK sing 178 n n C13 C14 HMK doub 179 n y C13 O3 HMK sing 180 n n C14 C15 HMK sing 181 n y C14 O4 HMK sing 182 n n C15 H15 HMK sing 183 n n O3 C16 HMK sing 184 n n C16 O4 HMK sing 185 n n C16 H161 HMK sing 186 n n C16 H162 HMK sing 187 n n # _atom_sites.entry_id 1ZGA _atom_sites.fract_transf_matrix[1][1] 0.014042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HMK A 1 365 1 HMK HMK . C 3 SAH A 1 3994 3994 SAH SAH . D 4 HOH A 1 3995 1 HOH TIP . D 4 HOH A 2 3996 2 HOH TIP . D 4 HOH A 3 3997 3 HOH TIP . D 4 HOH A 4 3998 4 HOH TIP . D 4 HOH A 5 3999 5 HOH TIP . D 4 HOH A 6 4000 6 HOH TIP . D 4 HOH A 7 4001 7 HOH TIP . D 4 HOH A 8 4002 8 HOH TIP . D 4 HOH A 9 4003 9 HOH TIP . D 4 HOH A 10 4004 10 HOH TIP . D 4 HOH A 11 4005 11 HOH TIP . D 4 HOH A 12 4006 12 HOH TIP . D 4 HOH A 13 4007 13 HOH TIP . D 4 HOH A 14 4008 14 HOH TIP . D 4 HOH A 15 4009 15 HOH TIP . D 4 HOH A 16 4010 16 HOH TIP . D 4 HOH A 17 4011 17 HOH TIP . D 4 HOH A 18 4012 18 HOH TIP . D 4 HOH A 19 4013 19 HOH TIP . D 4 HOH A 20 4014 20 HOH TIP . D 4 HOH A 21 4015 21 HOH TIP . D 4 HOH A 22 4016 22 HOH TIP . D 4 HOH A 23 4017 23 HOH TIP . D 4 HOH A 24 4018 24 HOH TIP . D 4 HOH A 25 4019 25 HOH TIP . D 4 HOH A 26 4020 26 HOH TIP . D 4 HOH A 27 4021 27 HOH TIP . D 4 HOH A 28 4022 28 HOH TIP . D 4 HOH A 29 4023 29 HOH TIP . D 4 HOH A 30 4024 30 HOH TIP . D 4 HOH A 31 4025 31 HOH TIP . D 4 HOH A 32 4026 32 HOH TIP . D 4 HOH A 33 4027 33 HOH TIP . D 4 HOH A 34 4028 34 HOH TIP . D 4 HOH A 35 4029 35 HOH TIP . D 4 HOH A 36 4030 36 HOH TIP . D 4 HOH A 37 4031 37 HOH TIP . D 4 HOH A 38 4032 38 HOH TIP . D 4 HOH A 39 4033 39 HOH TIP . D 4 HOH A 40 4034 40 HOH TIP . D 4 HOH A 41 4035 41 HOH TIP . D 4 HOH A 42 4036 42 HOH TIP . D 4 HOH A 43 4037 43 HOH TIP . D 4 HOH A 44 4038 44 HOH TIP . D 4 HOH A 45 4039 45 HOH TIP . D 4 HOH A 46 4040 46 HOH TIP . D 4 HOH A 47 4041 47 HOH TIP . D 4 HOH A 48 4042 48 HOH TIP . D 4 HOH A 49 4043 49 HOH TIP . D 4 HOH A 50 4044 50 HOH TIP . D 4 HOH A 51 4045 51 HOH TIP . D 4 HOH A 52 4046 52 HOH TIP . D 4 HOH A 53 4047 53 HOH TIP . D 4 HOH A 54 4048 54 HOH TIP . D 4 HOH A 55 4049 55 HOH TIP . D 4 HOH A 56 4050 56 HOH TIP . D 4 HOH A 57 4051 57 HOH TIP . D 4 HOH A 58 4052 58 HOH TIP . D 4 HOH A 59 4053 59 HOH TIP . D 4 HOH A 60 4054 60 HOH TIP . D 4 HOH A 61 4055 61 HOH TIP . D 4 HOH A 62 4056 62 HOH TIP . D 4 HOH A 63 4057 64 HOH TIP . D 4 HOH A 64 4058 65 HOH TIP . D 4 HOH A 65 4059 66 HOH TIP . D 4 HOH A 66 4060 67 HOH TIP . D 4 HOH A 67 4061 68 HOH TIP . D 4 HOH A 68 4062 70 HOH TIP . D 4 HOH A 69 4063 71 HOH TIP . D 4 HOH A 70 4064 72 HOH TIP . D 4 HOH A 71 4065 75 HOH TIP . D 4 HOH A 72 4066 78 HOH TIP . D 4 HOH A 73 4067 79 HOH TIP . D 4 HOH A 74 4068 80 HOH TIP . D 4 HOH A 75 4069 82 HOH TIP . D 4 HOH A 76 4070 83 HOH TIP . D 4 HOH A 77 4071 84 HOH TIP . D 4 HOH A 78 4072 85 HOH TIP . D 4 HOH A 79 4073 86 HOH TIP . D 4 HOH A 80 4074 88 HOH TIP . D 4 HOH A 81 4075 89 HOH TIP . D 4 HOH A 82 4076 90 HOH TIP . D 4 HOH A 83 4077 91 HOH TIP . D 4 HOH A 84 4078 92 HOH TIP . D 4 HOH A 85 4079 93 HOH TIP . D 4 HOH A 86 4080 94 HOH TIP . D 4 HOH A 87 4081 95 HOH TIP . D 4 HOH A 88 4082 96 HOH TIP . D 4 HOH A 89 4083 97 HOH TIP . D 4 HOH A 90 4084 98 HOH TIP . D 4 HOH A 91 4085 99 HOH TIP . D 4 HOH A 92 4086 100 HOH TIP . D 4 HOH A 93 4087 102 HOH TIP . D 4 HOH A 94 4088 104 HOH TIP . D 4 HOH A 95 4089 105 HOH TIP . D 4 HOH A 96 4090 108 HOH TIP . D 4 HOH A 97 4091 109 HOH TIP . D 4 HOH A 98 4092 111 HOH TIP . D 4 HOH A 99 4093 114 HOH TIP . D 4 HOH A 100 4094 116 HOH TIP . D 4 HOH A 101 4095 117 HOH TIP . D 4 HOH A 102 4096 118 HOH TIP . D 4 HOH A 103 4097 120 HOH TIP . D 4 HOH A 104 4098 121 HOH TIP . D 4 HOH A 105 4099 123 HOH TIP . D 4 HOH A 106 4100 124 HOH TIP . D 4 HOH A 107 4101 125 HOH TIP . D 4 HOH A 108 4102 126 HOH TIP . D 4 HOH A 109 4103 127 HOH TIP . D 4 HOH A 110 4104 128 HOH TIP . D 4 HOH A 111 4105 129 HOH TIP . D 4 HOH A 112 4106 130 HOH TIP . D 4 HOH A 113 4107 131 HOH TIP . D 4 HOH A 114 4108 132 HOH TIP . D 4 HOH A 115 4109 133 HOH TIP . D 4 HOH A 116 4110 134 HOH TIP . D 4 HOH A 117 4111 135 HOH TIP . D 4 HOH A 118 4112 136 HOH TIP . D 4 HOH A 119 4113 137 HOH TIP . D 4 HOH A 120 4114 138 HOH TIP . D 4 HOH A 121 4115 139 HOH TIP . D 4 HOH A 122 4116 143 HOH TIP . D 4 HOH A 123 4117 145 HOH TIP . D 4 HOH A 124 4118 146 HOH TIP . D 4 HOH A 125 4119 147 HOH TIP . D 4 HOH A 126 4120 148 HOH TIP . D 4 HOH A 127 4121 149 HOH TIP . D 4 HOH A 128 4122 150 HOH TIP . D 4 HOH A 129 4123 151 HOH TIP . D 4 HOH A 130 4124 152 HOH TIP . D 4 HOH A 131 4125 153 HOH TIP . D 4 HOH A 132 4126 156 HOH TIP . D 4 HOH A 133 4127 162 HOH TIP . D 4 HOH A 134 4128 163 HOH TIP . D 4 HOH A 135 4129 164 HOH TIP . D 4 HOH A 136 4130 165 HOH TIP . D 4 HOH A 137 4131 166 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HMK . . . B 2 102.073 73.219 32.872 1 74.94 ? C1 HMK 365 A 1 HETATM 2 O O1 HMK . . . B 2 101.612 73.504 31.591 1 75.72 ? O1 HMK 365 A 1 HETATM 3 C C2 HMK . . . B 2 102.281 74.559 30.907 1 76.49 ? C2 HMK 365 A 1 HETATM 4 C C3 HMK . . . B 2 102.746 75.78 31.658 1 76.28 ? C3 HMK 365 A 1 HETATM 5 C C4 HMK . . . B 2 102.488 75.872 33.227 1 75.59 ? C4 HMK 365 A 1 HETATM 6 C C5 HMK . . . B 2 101.767 74.54 33.85 1 74.97 ? C5 HMK 365 A 1 HETATM 7 C C6 HMK . . . B 2 102.534 74.507 29.461 1 78.12 ? C6 HMK 365 A 1 HETATM 8 C C7 HMK . . . B 2 103.214 75.592 28.737 1 78.53 ? C7 HMK 365 A 1 HETATM 9 C C8 HMK . . . B 2 103.649 76.775 29.509 1 77.98 ? C8 HMK 365 A 1 HETATM 10 C C9 HMK . . . B 2 103.418 76.871 30.945 1 76.58 ? C9 HMK 365 A 1 HETATM 11 O O2 HMK . . . B 2 101.561 76.92 33.313 1 74.88 ? O2 HMK 365 A 1 HETATM 12 O O5 HMK . . . B 2 102.361 73.983 35.034 1 74.01 ? O5 HMK 365 A 1 HETATM 13 O O6 HMK . . . B 2 103.44 75.513 27.397 1 79.48 ? O6 HMK 365 A 1 HETATM 14 C C10 HMK . . . B 2 100.317 76.549 33.779 1 74.36 ? C10 HMK 365 A 1 HETATM 15 C C11 HMK . . . B 2 100.379 75.121 34.128 1 74.51 ? C11 HMK 365 A 1 HETATM 16 C C12 HMK . . . B 2 99.128 77.366 33.947 1 73.78 ? C12 HMK 365 A 1 HETATM 17 C C13 HMK . . . B 2 97.963 76.69 34.488 1 73.64 ? C13 HMK 365 A 1 HETATM 18 C C14 HMK . . . B 2 97.985 75.272 34.848 1 73.95 ? C14 HMK 365 A 1 HETATM 19 C C15 HMK . . . B 2 99.192 74.442 34.682 1 73.58 ? C15 HMK 365 A 1 HETATM 20 O O3 HMK . . . B 2 96.717 77.202 34.75 1 73.84 ? O3 HMK 365 A 1 HETATM 21 C C16 HMK . . . B 2 95.925 76.127 35.28 1 73.9 ? C16 HMK 365 A 1 HETATM 22 O O4 HMK . . . B 2 96.739 74.936 35.331 1 73.49 ? O4 HMK 365 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #