data_1ZH6 # _model_server_result.job_id aO6OwJuwnh0ZJUPopYSU0Q _model_server_result.datetime_utc '2024-12-02 08:05:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zh6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 1ZH6 # _exptl.entry_id 1ZH6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZH6 _cell.length_a 103.362 _cell.length_b 103.362 _cell.length_c 70.837 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZH6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_664 -y+1,-x+1,-z-1/2 0 -1 0 -1 0 0 0 0 -1 103.362 103.362 -35.4185 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 159 A CYS 159 1_555 C S2 BME . A BME 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? covale ? covale2 A SG CYS 190 A CYS 190 1_555 D S2 BME . A BME 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 98 n n C1 O1 BME sing 99 n n C1 H11 BME sing 100 n n C1 H12 BME sing 101 n n C2 S2 BME sing 102 n n C2 H21 BME sing 103 n n C2 H22 BME sing 104 n n O1 HO1 BME sing 105 n n S2 HS2 BME sing 106 n n # _atom_sites.entry_id 1ZH6 _atom_sites.fract_transf_matrix[1][1] 0.009675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014117 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4AF A 1 315 101 4AF 4AF . C 3 BME A 1 402 402 BME SEO . D 3 BME A 1 403 403 BME SEO . E 4 HOH A 1 404 1 HOH HOH . E 4 HOH A 2 405 2 HOH HOH . E 4 HOH A 3 406 3 HOH HOH . E 4 HOH A 4 407 4 HOH HOH . E 4 HOH A 5 408 5 HOH HOH . E 4 HOH A 6 409 6 HOH HOH . E 4 HOH A 7 410 7 HOH HOH . E 4 HOH A 8 411 8 HOH HOH . E 4 HOH A 9 412 9 HOH HOH . E 4 HOH A 10 413 11 HOH HOH . E 4 HOH A 11 414 12 HOH HOH . E 4 HOH A 12 415 13 HOH HOH . E 4 HOH A 13 416 14 HOH HOH . E 4 HOH A 14 417 15 HOH HOH . E 4 HOH A 15 418 16 HOH HOH . E 4 HOH A 16 419 17 HOH HOH . E 4 HOH A 17 420 18 HOH HOH . E 4 HOH A 18 421 19 HOH HOH . E 4 HOH A 19 422 20 HOH HOH . E 4 HOH A 20 423 21 HOH HOH . E 4 HOH A 21 424 22 HOH HOH . E 4 HOH A 22 425 23 HOH HOH . E 4 HOH A 23 426 24 HOH HOH . E 4 HOH A 24 427 25 HOH HOH . E 4 HOH A 25 428 26 HOH HOH . E 4 HOH A 26 429 27 HOH HOH . E 4 HOH A 27 430 28 HOH HOH . E 4 HOH A 28 431 29 HOH HOH . E 4 HOH A 29 432 30 HOH HOH . E 4 HOH A 30 433 31 HOH HOH . E 4 HOH A 31 434 32 HOH HOH . E 4 HOH A 32 435 33 HOH HOH . E 4 HOH A 33 436 35 HOH HOH . E 4 HOH A 34 437 36 HOH HOH . E 4 HOH A 35 438 37 HOH HOH . E 4 HOH A 36 439 38 HOH HOH . E 4 HOH A 37 440 39 HOH HOH . E 4 HOH A 38 441 40 HOH HOH . E 4 HOH A 39 442 41 HOH HOH . E 4 HOH A 40 443 42 HOH HOH . E 4 HOH A 41 444 43 HOH HOH . E 4 HOH A 42 445 44 HOH HOH . E 4 HOH A 43 446 45 HOH HOH . E 4 HOH A 44 447 46 HOH HOH . E 4 HOH A 45 448 47 HOH HOH . E 4 HOH A 46 449 48 HOH HOH . E 4 HOH A 47 450 49 HOH HOH . E 4 HOH A 48 451 50 HOH HOH . E 4 HOH A 49 452 51 HOH HOH . E 4 HOH A 50 453 52 HOH HOH . E 4 HOH A 51 454 54 HOH HOH . E 4 HOH A 52 455 55 HOH HOH . E 4 HOH A 53 456 56 HOH HOH . E 4 HOH A 54 457 57 HOH HOH . E 4 HOH A 55 458 58 HOH HOH . E 4 HOH A 56 459 59 HOH HOH . E 4 HOH A 57 460 60 HOH HOH . E 4 HOH A 58 461 61 HOH HOH . E 4 HOH A 59 462 63 HOH HOH . E 4 HOH A 60 463 64 HOH HOH . E 4 HOH A 61 464 65 HOH HOH . E 4 HOH A 62 465 66 HOH HOH . E 4 HOH A 63 466 67 HOH HOH . E 4 HOH A 64 467 68 HOH HOH . E 4 HOH A 65 468 70 HOH HOH . E 4 HOH A 66 469 71 HOH HOH . E 4 HOH A 67 470 72 HOH HOH . E 4 HOH A 68 471 73 HOH HOH . E 4 HOH A 69 472 74 HOH HOH . E 4 HOH A 70 473 75 HOH HOH . E 4 HOH A 71 474 77 HOH HOH . E 4 HOH A 72 475 78 HOH HOH . E 4 HOH A 73 476 80 HOH HOH . E 4 HOH A 74 477 82 HOH HOH . E 4 HOH A 75 478 85 HOH HOH . E 4 HOH A 76 479 86 HOH HOH . E 4 HOH A 77 480 87 HOH HOH . E 4 HOH A 78 481 88 HOH HOH . E 4 HOH A 79 482 93 HOH HOH . E 4 HOH A 80 483 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 3 82.414 46.019 -9.973 1 64.33 ? C1 BME 403 A 1 HETATM 2 C C2 BME . . . D 3 82.252 46.379 -8.504 1 69.23 ? C2 BME 403 A 1 HETATM 3 O O1 BME . . . D 3 82.83 47.154 -10.708 1 62.8 ? O1 BME 403 A 1 HETATM 4 S S2 BME . . . D 3 83.75 45.994 -7.543 1 73.81 ? S2 BME 403 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #