data_1ZHJ # _model_server_result.job_id 93e3Ho-8CQk6rydPnQsFmg _model_server_result.datetime_utc '2024-11-02 14:24:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 1ZHJ # _exptl.entry_id 1ZHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZHJ _cell.length_a 52.7 _cell.length_b 149.5 _cell.length_c 79.6 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.7 0 39.8 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 23 A CYS 80 1_555 G HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.706 ? metalc ? metalc2 A O GLY 41 A GLY 98 1_555 G HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc3 A OG1 THR 62 A THR 119 1_555 F HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc4 A SG CYS 152 A CYS 209 1_555 F HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc5 A SG CYS 227 A CYS 284 1_555 C HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc6 A SG CYS 227 A CYS 284 1_555 H HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.652 ? metalc ? metalc7 A N CYS 227 A CYS 284 1_555 H HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.52 ? metalc ? metalc8 A SD MET 231 A MET 288 1_555 D HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc9 A OD2 ASP 245 A ASP 302 1_555 D HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.21 ? metalc ? metalc10 A O HIS 248 A HIS 305 1_555 H HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.108 ? metalc ? metalc11 H HG HG . A HG 407 1_555 J O HOH . A HOH 736 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc12 H HG HG . A HG 407 1_555 J O HOH . A HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.443 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZHJ _atom_sites.fract_transf_matrix[1][1] 0.018975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GAL A 1 1 1 GAL DRG . C 3 HG A 1 401 401 HG HG . D 3 HG A 1 402 402 HG HG . E 4 CL A 1 403 403 CL CL . F 3 HG A 1 404 404 HG HG . G 3 HG A 1 405 405 HG HG . H 3 HG A 1 407 407 HG HG . I 4 CL A 1 408 408 CL CL . J 5 HOH A 1 501 501 HOH TIP . J 5 HOH A 2 502 502 HOH TIP . J 5 HOH A 3 504 504 HOH TIP . J 5 HOH A 4 505 505 HOH TIP . J 5 HOH A 5 506 506 HOH TIP . J 5 HOH A 6 507 507 HOH TIP . J 5 HOH A 7 508 508 HOH TIP . J 5 HOH A 8 509 509 HOH TIP . J 5 HOH A 9 510 510 HOH TIP . J 5 HOH A 10 511 511 HOH TIP . J 5 HOH A 11 512 512 HOH TIP . J 5 HOH A 12 513 513 HOH TIP . J 5 HOH A 13 514 514 HOH TIP . J 5 HOH A 14 515 515 HOH TIP . J 5 HOH A 15 516 516 HOH TIP . J 5 HOH A 16 517 517 HOH TIP . J 5 HOH A 17 518 518 HOH TIP . J 5 HOH A 18 519 519 HOH TIP . J 5 HOH A 19 520 520 HOH TIP . J 5 HOH A 20 521 521 HOH TIP . J 5 HOH A 21 522 522 HOH TIP . J 5 HOH A 22 523 523 HOH TIP . J 5 HOH A 23 524 524 HOH TIP . J 5 HOH A 24 525 525 HOH TIP . J 5 HOH A 25 526 526 HOH TIP . J 5 HOH A 26 527 527 HOH TIP . J 5 HOH A 27 528 528 HOH TIP . J 5 HOH A 28 529 529 HOH TIP . J 5 HOH A 29 530 530 HOH TIP . J 5 HOH A 30 531 531 HOH TIP . J 5 HOH A 31 532 532 HOH TIP . J 5 HOH A 32 533 533 HOH TIP . J 5 HOH A 33 534 534 HOH TIP . J 5 HOH A 34 535 535 HOH TIP . J 5 HOH A 35 536 536 HOH TIP . J 5 HOH A 36 537 537 HOH TIP . J 5 HOH A 37 538 538 HOH TIP . J 5 HOH A 38 539 539 HOH TIP . J 5 HOH A 39 540 540 HOH TIP . J 5 HOH A 40 541 541 HOH TIP . J 5 HOH A 41 542 542 HOH TIP . J 5 HOH A 42 543 543 HOH TIP . J 5 HOH A 43 544 544 HOH TIP . J 5 HOH A 44 545 545 HOH TIP . J 5 HOH A 45 546 546 HOH TIP . J 5 HOH A 46 547 547 HOH TIP . J 5 HOH A 47 548 548 HOH TIP . J 5 HOH A 48 549 549 HOH TIP . J 5 HOH A 49 550 550 HOH TIP . J 5 HOH A 50 551 551 HOH TIP . J 5 HOH A 51 552 552 HOH TIP . J 5 HOH A 52 553 553 HOH TIP . J 5 HOH A 53 555 555 HOH TIP . J 5 HOH A 54 556 556 HOH TIP . J 5 HOH A 55 557 557 HOH TIP . J 5 HOH A 56 558 558 HOH TIP . J 5 HOH A 57 559 559 HOH TIP . J 5 HOH A 58 560 560 HOH TIP . J 5 HOH A 59 561 561 HOH TIP . J 5 HOH A 60 562 562 HOH TIP . J 5 HOH A 61 563 563 HOH TIP . J 5 HOH A 62 564 564 HOH TIP . J 5 HOH A 63 565 565 HOH TIP . J 5 HOH A 64 566 566 HOH TIP . J 5 HOH A 65 567 567 HOH TIP . J 5 HOH A 66 568 568 HOH TIP . J 5 HOH A 67 569 569 HOH TIP . J 5 HOH A 68 570 570 HOH TIP . J 5 HOH A 69 571 571 HOH TIP . J 5 HOH A 70 572 572 HOH TIP . J 5 HOH A 71 573 573 HOH TIP . J 5 HOH A 72 574 574 HOH TIP . J 5 HOH A 73 575 575 HOH TIP . J 5 HOH A 74 577 577 HOH TIP . J 5 HOH A 75 578 578 HOH TIP . J 5 HOH A 76 579 579 HOH TIP . J 5 HOH A 77 580 580 HOH TIP . J 5 HOH A 78 581 581 HOH TIP . J 5 HOH A 79 582 582 HOH TIP . J 5 HOH A 80 583 583 HOH TIP . J 5 HOH A 81 584 584 HOH TIP . J 5 HOH A 82 585 585 HOH TIP . J 5 HOH A 83 586 586 HOH TIP . J 5 HOH A 84 587 587 HOH TIP . J 5 HOH A 85 588 588 HOH TIP . J 5 HOH A 86 589 589 HOH TIP . J 5 HOH A 87 591 591 HOH TIP . J 5 HOH A 88 592 592 HOH TIP . J 5 HOH A 89 593 593 HOH TIP . J 5 HOH A 90 594 594 HOH TIP . J 5 HOH A 91 595 595 HOH TIP . J 5 HOH A 92 596 596 HOH TIP . J 5 HOH A 93 597 597 HOH TIP . J 5 HOH A 94 598 598 HOH TIP . J 5 HOH A 95 599 599 HOH TIP . J 5 HOH A 96 600 600 HOH TIP . J 5 HOH A 97 601 601 HOH TIP . J 5 HOH A 98 602 602 HOH TIP . J 5 HOH A 99 603 603 HOH TIP . J 5 HOH A 100 605 605 HOH TIP . J 5 HOH A 101 606 606 HOH TIP . J 5 HOH A 102 607 607 HOH TIP . J 5 HOH A 103 609 609 HOH TIP . J 5 HOH A 104 610 610 HOH TIP . J 5 HOH A 105 611 611 HOH TIP . J 5 HOH A 106 612 612 HOH TIP . J 5 HOH A 107 613 613 HOH TIP . J 5 HOH A 108 614 614 HOH TIP . J 5 HOH A 109 615 615 HOH TIP . J 5 HOH A 110 616 616 HOH TIP . J 5 HOH A 111 617 617 HOH TIP . J 5 HOH A 112 618 618 HOH TIP . J 5 HOH A 113 619 619 HOH TIP . J 5 HOH A 114 620 620 HOH TIP . J 5 HOH A 115 621 621 HOH TIP . J 5 HOH A 116 622 622 HOH TIP . J 5 HOH A 117 623 623 HOH TIP . J 5 HOH A 118 624 624 HOH TIP . J 5 HOH A 119 625 625 HOH TIP . J 5 HOH A 120 626 626 HOH TIP . J 5 HOH A 121 627 627 HOH TIP . J 5 HOH A 122 628 628 HOH TIP . J 5 HOH A 123 629 629 HOH TIP . J 5 HOH A 124 630 630 HOH TIP . J 5 HOH A 125 631 631 HOH TIP . J 5 HOH A 126 632 632 HOH TIP . J 5 HOH A 127 633 633 HOH TIP . J 5 HOH A 128 634 634 HOH TIP . J 5 HOH A 129 635 635 HOH TIP . J 5 HOH A 130 636 636 HOH TIP . J 5 HOH A 131 637 637 HOH TIP . J 5 HOH A 132 638 638 HOH TIP . J 5 HOH A 133 639 639 HOH TIP . J 5 HOH A 134 640 640 HOH TIP . J 5 HOH A 135 641 641 HOH TIP . J 5 HOH A 136 642 642 HOH TIP . J 5 HOH A 137 643 643 HOH TIP . J 5 HOH A 138 644 644 HOH TIP . J 5 HOH A 139 645 645 HOH TIP . J 5 HOH A 140 646 646 HOH TIP . J 5 HOH A 141 647 647 HOH TIP . J 5 HOH A 142 648 648 HOH TIP . J 5 HOH A 143 649 649 HOH TIP . J 5 HOH A 144 650 650 HOH TIP . J 5 HOH A 145 651 651 HOH TIP . J 5 HOH A 146 652 652 HOH TIP . J 5 HOH A 147 653 653 HOH TIP . J 5 HOH A 148 654 654 HOH TIP . J 5 HOH A 149 655 655 HOH TIP . J 5 HOH A 150 656 656 HOH TIP . J 5 HOH A 151 657 657 HOH TIP . J 5 HOH A 152 658 658 HOH TIP . J 5 HOH A 153 659 659 HOH TIP . J 5 HOH A 154 660 660 HOH TIP . J 5 HOH A 155 661 661 HOH TIP . J 5 HOH A 156 662 662 HOH TIP . J 5 HOH A 157 663 663 HOH TIP . J 5 HOH A 158 664 664 HOH TIP . J 5 HOH A 159 665 665 HOH TIP . J 5 HOH A 160 666 666 HOH TIP . J 5 HOH A 161 667 667 HOH TIP . J 5 HOH A 162 668 668 HOH TIP . J 5 HOH A 163 669 669 HOH TIP . J 5 HOH A 164 670 670 HOH TIP . J 5 HOH A 165 671 671 HOH TIP . J 5 HOH A 166 672 672 HOH TIP . J 5 HOH A 167 673 673 HOH TIP . J 5 HOH A 168 674 674 HOH TIP . J 5 HOH A 169 675 675 HOH TIP . J 5 HOH A 170 676 676 HOH TIP . J 5 HOH A 171 677 677 HOH TIP . J 5 HOH A 172 678 678 HOH TIP . J 5 HOH A 173 679 679 HOH TIP . J 5 HOH A 174 680 680 HOH TIP . J 5 HOH A 175 681 681 HOH TIP . J 5 HOH A 176 682 682 HOH TIP . J 5 HOH A 177 683 683 HOH TIP . J 5 HOH A 178 684 684 HOH TIP . J 5 HOH A 179 685 685 HOH TIP . J 5 HOH A 180 686 686 HOH TIP . J 5 HOH A 181 687 687 HOH TIP . J 5 HOH A 182 688 688 HOH TIP . J 5 HOH A 183 689 689 HOH TIP . J 5 HOH A 184 690 690 HOH TIP . J 5 HOH A 185 691 691 HOH TIP . J 5 HOH A 186 692 692 HOH TIP . J 5 HOH A 187 693 693 HOH TIP . J 5 HOH A 188 694 694 HOH TIP . J 5 HOH A 189 695 695 HOH TIP . J 5 HOH A 190 696 696 HOH TIP . J 5 HOH A 191 697 697 HOH TIP . J 5 HOH A 192 698 698 HOH TIP . J 5 HOH A 193 700 700 HOH TIP . J 5 HOH A 194 701 701 HOH TIP . J 5 HOH A 195 702 702 HOH TIP . J 5 HOH A 196 703 703 HOH TIP . J 5 HOH A 197 704 704 HOH TIP . J 5 HOH A 198 705 705 HOH TIP . J 5 HOH A 199 706 706 HOH TIP . J 5 HOH A 200 707 707 HOH TIP . J 5 HOH A 201 708 708 HOH TIP . J 5 HOH A 202 709 709 HOH TIP . J 5 HOH A 203 710 710 HOH TIP . J 5 HOH A 204 711 711 HOH TIP . J 5 HOH A 205 712 712 HOH TIP . J 5 HOH A 206 713 713 HOH TIP . J 5 HOH A 207 714 714 HOH TIP . J 5 HOH A 208 715 715 HOH TIP . J 5 HOH A 209 716 716 HOH TIP . J 5 HOH A 210 717 717 HOH TIP . J 5 HOH A 211 718 718 HOH TIP . J 5 HOH A 212 719 719 HOH TIP . J 5 HOH A 213 720 720 HOH TIP . J 5 HOH A 214 721 721 HOH TIP . J 5 HOH A 215 722 722 HOH TIP . J 5 HOH A 216 723 723 HOH TIP . J 5 HOH A 217 724 724 HOH TIP . J 5 HOH A 218 725 725 HOH TIP . J 5 HOH A 219 726 726 HOH TIP . J 5 HOH A 220 727 727 HOH TIP . J 5 HOH A 221 728 728 HOH TIP . J 5 HOH A 222 729 729 HOH TIP . J 5 HOH A 223 730 730 HOH TIP . J 5 HOH A 224 731 731 HOH TIP . J 5 HOH A 225 732 732 HOH TIP . J 5 HOH A 226 733 733 HOH TIP . J 5 HOH A 227 734 734 HOH TIP . J 5 HOH A 228 735 735 HOH TIP . J 5 HOH A 229 736 736 HOH TIP . J 5 HOH A 230 737 737 HOH TIP . J 5 HOH A 231 738 738 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.015 _atom_site.Cartn_y 48.513 _atom_site.Cartn_z 41.475 _atom_site.occupancy 0.2 _atom_site.B_iso_or_equiv 25.17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 407 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #