data_1ZI5 # _model_server_result.job_id 10Xw6rv6mKPiR0fswh4RVw _model_server_result.datetime_utc '2024-11-02 14:33:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zi5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1ZI5 # _exptl.entry_id 1ZI5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.161 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "URIDINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZI5 _cell.length_a 52.55 _cell.length_b 149.81 _cell.length_c 79.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZI5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA,PQS dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 A,B,C,D,E,F,G,H,I,J 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.55 0 39.965 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 GAL NAG C1 O1 . O3 HO3 . sing 2 ? 2 3 2 FUC GAL C1 O1 . O2 HO2 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG ? 2 DRG 2 n B GAL 2 B 2 GAL ? 2 DRG 2 n B FUC 3 B 3 FUC ? 2 DRG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3 NAG . B NAG 1 1_555 B C1 GAL . B GAL 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing covale ? covale2 B O2 GAL . B GAL 2 1_555 B C1 FUC . B FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing metalc ? metalc1 A SG CYS 19 A CYS 80 1_555 H HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc2 A O GLY 37 A GLY 98 1_555 H HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc3 A OG1 THR 58 A THR 119 1_555 G HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc4 A SG CYS 148 A CYS 209 1_555 F HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc5 A SG CYS 148 A CYS 209 1_555 G HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc6 A O VAL 149 A VAL 210 1_555 F HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.519 ? metalc ? metalc7 A SG CYS 223 A CYS 284 1_555 D HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc8 A N CYS 223 A CYS 284 1_555 I HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.336 ? metalc ? metalc9 A SG CYS 223 A CYS 284 1_555 I HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? metalc ? metalc10 A SD MET 227 A MET 288 1_555 E HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? metalc ? metalc11 A O HIS 244 A HIS 305 1_555 I HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.236 ? metalc ? metalc12 F HG HG . A HG 403 1_555 J O HOH . A HOH 552 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc13 F HG HG . A HG 403 1_555 J O HOH . A HOH 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? metalc ? metalc14 I HG HG . A HG 407 1_555 J O HOH . A HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? # _chem_comp.formula 'C9 H14 N2 O12 P2' _chem_comp.formula_weight 404.161 _chem_comp.id UDP _chem_comp.mon_nstd_flag . _chem_comp.name "URIDINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 UDP sing 435 n n N1 C6 UDP sing 436 n n N1 C1' UDP sing 437 n n C2 N3 UDP sing 438 n n C2 O2 UDP doub 439 n n N3 C4 UDP sing 440 n n N3 HN3 UDP sing 441 n n C4 C5 UDP sing 442 n n C4 O4 UDP doub 443 n n C5 C6 UDP doub 444 n n C5 H5 UDP sing 445 n n C6 H6 UDP sing 446 n n C1' C2' UDP sing 447 n n C1' O4' UDP sing 448 n n C1' H1' UDP sing 449 n n C2' O2' UDP sing 450 n n C2' C3' UDP sing 451 n n C2' H2' UDP sing 452 n n O2' HO2' UDP sing 453 n n C3' C4' UDP sing 454 n n C3' O3' UDP sing 455 n n C3' H3' UDP sing 456 n n C4' O4' UDP sing 457 n n C4' C5' UDP sing 458 n n C4' H4' UDP sing 459 n n O3' HO3' UDP sing 460 n n C5' O5' UDP sing 461 n n C5' "H5'1" UDP sing 462 n n C5' "H5'2" UDP sing 463 n n O5' PA UDP sing 464 n n PA O1A UDP doub 465 n n PA O2A UDP sing 466 n n PA O3A UDP sing 467 n n O2A HOA2 UDP sing 468 n n O3A PB UDP sing 469 n n PB O1B UDP doub 470 n n PB O2B UDP sing 471 n n PB O3B UDP sing 472 n n O2B HOB2 UDP sing 473 n n O3B HOB3 UDP sing 474 n n # _atom_sites.entry_id 1ZI5 _atom_sites.fract_transf_matrix[1][1] 0.019029 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012511 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UDP A 1 1 1 UDP UDP . D 4 HG A 1 401 401 HG HG . E 4 HG A 1 402 402 HG HG . F 4 HG A 1 403 403 HG HG . G 4 HG A 1 404 404 HG HG . H 4 HG A 1 405 405 HG HG . I 4 HG A 1 407 407 HG HG . J 5 HOH A 1 501 501 HOH TIP . J 5 HOH A 2 502 502 HOH TIP . J 5 HOH A 3 503 503 HOH TIP . J 5 HOH A 4 504 504 HOH TIP . J 5 HOH A 5 505 505 HOH TIP . J 5 HOH A 6 506 506 HOH TIP . J 5 HOH A 7 507 507 HOH TIP . J 5 HOH A 8 508 508 HOH TIP . J 5 HOH A 9 509 509 HOH TIP . J 5 HOH A 10 510 510 HOH TIP . J 5 HOH A 11 511 511 HOH TIP . J 5 HOH A 12 512 512 HOH TIP . J 5 HOH A 13 513 513 HOH TIP . J 5 HOH A 14 514 514 HOH TIP . J 5 HOH A 15 515 515 HOH TIP . J 5 HOH A 16 516 516 HOH TIP . J 5 HOH A 17 517 517 HOH TIP . J 5 HOH A 18 518 518 HOH TIP . J 5 HOH A 19 519 519 HOH TIP . J 5 HOH A 20 520 520 HOH TIP . J 5 HOH A 21 521 521 HOH TIP . J 5 HOH A 22 522 522 HOH TIP . J 5 HOH A 23 523 523 HOH TIP . J 5 HOH A 24 524 524 HOH TIP . J 5 HOH A 25 525 525 HOH TIP . J 5 HOH A 26 526 526 HOH TIP . J 5 HOH A 27 527 527 HOH TIP . J 5 HOH A 28 528 528 HOH TIP . J 5 HOH A 29 529 529 HOH TIP . J 5 HOH A 30 530 530 HOH TIP . J 5 HOH A 31 531 531 HOH TIP . J 5 HOH A 32 532 532 HOH TIP . J 5 HOH A 33 533 533 HOH TIP . J 5 HOH A 34 534 534 HOH TIP . J 5 HOH A 35 535 535 HOH TIP . J 5 HOH A 36 536 536 HOH TIP . J 5 HOH A 37 537 537 HOH TIP . J 5 HOH A 38 538 538 HOH TIP . J 5 HOH A 39 539 539 HOH TIP . J 5 HOH A 40 540 540 HOH TIP . J 5 HOH A 41 541 541 HOH TIP . J 5 HOH A 42 542 542 HOH TIP . J 5 HOH A 43 543 543 HOH TIP . J 5 HOH A 44 544 544 HOH TIP . J 5 HOH A 45 545 545 HOH TIP . J 5 HOH A 46 546 546 HOH TIP . J 5 HOH A 47 547 547 HOH TIP . J 5 HOH A 48 548 548 HOH TIP . J 5 HOH A 49 549 549 HOH TIP . J 5 HOH A 50 550 550 HOH TIP . J 5 HOH A 51 551 551 HOH TIP . J 5 HOH A 52 552 552 HOH TIP . J 5 HOH A 53 553 553 HOH TIP . J 5 HOH A 54 554 554 HOH TIP . J 5 HOH A 55 555 555 HOH TIP . J 5 HOH A 56 556 556 HOH TIP . J 5 HOH A 57 557 557 HOH TIP . J 5 HOH A 58 558 558 HOH TIP . J 5 HOH A 59 559 559 HOH TIP . J 5 HOH A 60 560 560 HOH TIP . J 5 HOH A 61 561 561 HOH TIP . J 5 HOH A 62 562 562 HOH TIP . J 5 HOH A 63 563 563 HOH TIP . J 5 HOH A 64 564 564 HOH TIP . J 5 HOH A 65 565 565 HOH TIP . J 5 HOH A 66 566 566 HOH TIP . J 5 HOH A 67 567 567 HOH TIP . J 5 HOH A 68 568 568 HOH TIP . J 5 HOH A 69 569 569 HOH TIP . J 5 HOH A 70 570 570 HOH TIP . J 5 HOH A 71 571 571 HOH TIP . J 5 HOH A 72 572 572 HOH TIP . J 5 HOH A 73 573 573 HOH TIP . J 5 HOH A 74 574 574 HOH TIP . J 5 HOH A 75 575 575 HOH TIP . J 5 HOH A 76 576 576 HOH TIP . J 5 HOH A 77 577 577 HOH TIP . J 5 HOH A 78 578 578 HOH TIP . J 5 HOH A 79 579 579 HOH TIP . J 5 HOH A 80 580 580 HOH TIP . J 5 HOH A 81 581 581 HOH TIP . J 5 HOH A 82 582 582 HOH TIP . J 5 HOH A 83 583 583 HOH TIP . J 5 HOH A 84 584 584 HOH TIP . J 5 HOH A 85 585 585 HOH TIP . J 5 HOH A 86 586 586 HOH TIP . J 5 HOH A 87 587 587 HOH TIP . J 5 HOH A 88 588 588 HOH TIP . J 5 HOH A 89 589 589 HOH TIP . J 5 HOH A 90 590 590 HOH TIP . J 5 HOH A 91 591 591 HOH TIP . J 5 HOH A 92 592 592 HOH TIP . J 5 HOH A 93 593 593 HOH TIP . J 5 HOH A 94 594 594 HOH TIP . J 5 HOH A 95 595 595 HOH TIP . J 5 HOH A 96 596 596 HOH TIP . J 5 HOH A 97 597 597 HOH TIP . J 5 HOH A 98 598 598 HOH TIP . J 5 HOH A 99 599 599 HOH TIP . J 5 HOH A 100 600 600 HOH TIP . J 5 HOH A 101 601 601 HOH TIP . J 5 HOH A 102 602 602 HOH TIP . J 5 HOH A 103 603 603 HOH TIP . J 5 HOH A 104 604 604 HOH TIP . J 5 HOH A 105 605 605 HOH TIP . J 5 HOH A 106 606 606 HOH TIP . J 5 HOH A 107 607 607 HOH TIP . J 5 HOH A 108 608 608 HOH TIP . J 5 HOH A 109 609 609 HOH TIP . J 5 HOH A 110 610 610 HOH TIP . J 5 HOH A 111 611 611 HOH TIP . J 5 HOH A 112 612 612 HOH TIP . J 5 HOH A 113 613 613 HOH TIP . J 5 HOH A 114 614 614 HOH TIP . J 5 HOH A 115 615 615 HOH TIP . J 5 HOH A 116 616 616 HOH TIP . J 5 HOH A 117 617 617 HOH TIP . J 5 HOH A 118 618 618 HOH TIP . J 5 HOH A 119 619 619 HOH TIP . J 5 HOH A 120 620 620 HOH TIP . J 5 HOH A 121 621 621 HOH TIP . J 5 HOH A 122 622 622 HOH TIP . J 5 HOH A 123 623 623 HOH TIP . J 5 HOH A 124 624 624 HOH TIP . J 5 HOH A 125 625 625 HOH TIP . J 5 HOH A 126 626 626 HOH TIP . J 5 HOH A 127 627 627 HOH TIP . J 5 HOH A 128 628 628 HOH TIP . J 5 HOH A 129 629 629 HOH TIP . J 5 HOH A 130 630 630 HOH TIP . J 5 HOH A 131 631 631 HOH TIP . J 5 HOH A 132 632 632 HOH TIP . J 5 HOH A 133 633 633 HOH TIP . J 5 HOH A 134 634 634 HOH TIP . J 5 HOH A 135 635 635 HOH TIP . J 5 HOH A 136 636 636 HOH TIP . J 5 HOH A 137 637 637 HOH TIP . J 5 HOH A 138 638 638 HOH TIP . J 5 HOH A 139 639 639 HOH TIP . J 5 HOH A 140 640 640 HOH TIP . J 5 HOH A 141 641 641 HOH TIP . J 5 HOH A 142 642 642 HOH TIP . J 5 HOH A 143 643 643 HOH TIP . J 5 HOH A 144 644 644 HOH TIP . J 5 HOH A 145 645 645 HOH TIP . J 5 HOH A 146 646 646 HOH TIP . J 5 HOH A 147 647 647 HOH TIP . J 5 HOH A 148 648 648 HOH TIP . J 5 HOH A 149 649 649 HOH TIP . J 5 HOH A 150 650 650 HOH TIP . J 5 HOH A 151 651 651 HOH TIP . J 5 HOH A 152 652 652 HOH TIP . J 5 HOH A 153 653 653 HOH TIP . J 5 HOH A 154 654 654 HOH TIP . J 5 HOH A 155 655 655 HOH TIP . J 5 HOH A 156 656 656 HOH TIP . J 5 HOH A 157 657 657 HOH TIP . J 5 HOH A 158 658 658 HOH TIP . J 5 HOH A 159 659 659 HOH TIP . J 5 HOH A 160 660 660 HOH TIP . J 5 HOH A 161 661 661 HOH TIP . J 5 HOH A 162 662 662 HOH TIP . J 5 HOH A 163 663 663 HOH TIP . J 5 HOH A 164 664 664 HOH TIP . J 5 HOH A 165 665 665 HOH TIP . J 5 HOH A 166 666 666 HOH TIP . J 5 HOH A 167 667 667 HOH TIP . J 5 HOH A 168 668 668 HOH TIP . J 5 HOH A 169 669 669 HOH TIP . J 5 HOH A 170 670 670 HOH TIP . J 5 HOH A 171 671 671 HOH TIP . J 5 HOH A 172 672 672 HOH TIP . J 5 HOH A 173 673 673 HOH TIP . J 5 HOH A 174 674 674 HOH TIP . J 5 HOH A 175 675 675 HOH TIP . J 5 HOH A 176 676 676 HOH TIP . J 5 HOH A 177 677 677 HOH TIP . J 5 HOH A 178 678 678 HOH TIP . J 5 HOH A 179 679 679 HOH TIP . J 5 HOH A 180 680 680 HOH TIP . J 5 HOH A 181 681 681 HOH TIP . J 5 HOH A 182 682 682 HOH TIP . J 5 HOH A 183 683 683 HOH TIP . J 5 HOH A 184 684 684 HOH TIP . J 5 HOH A 185 685 685 HOH TIP . J 5 HOH A 186 686 686 HOH TIP . J 5 HOH A 187 687 687 HOH TIP . J 5 HOH A 188 688 688 HOH TIP . J 5 HOH A 189 689 689 HOH TIP . J 5 HOH A 190 690 690 HOH TIP . J 5 HOH A 191 691 691 HOH TIP . J 5 HOH A 192 692 692 HOH TIP . J 5 HOH A 193 693 693 HOH TIP . J 5 HOH A 194 694 694 HOH TIP . J 5 HOH A 195 695 695 HOH TIP . J 5 HOH A 196 696 696 HOH TIP . J 5 HOH A 197 697 697 HOH TIP . J 5 HOH A 198 698 698 HOH TIP . J 5 HOH A 199 699 699 HOH TIP . J 5 HOH A 200 700 700 HOH TIP . J 5 HOH A 201 701 701 HOH TIP . J 5 HOH A 202 702 702 HOH TIP . J 5 HOH A 203 703 703 HOH TIP . J 5 HOH A 204 704 704 HOH TIP . J 5 HOH A 205 705 705 HOH TIP . J 5 HOH A 206 706 706 HOH TIP . J 5 HOH A 207 707 707 HOH TIP . J 5 HOH A 208 708 708 HOH TIP . J 5 HOH A 209 709 709 HOH TIP . J 5 HOH A 210 710 710 HOH TIP . J 5 HOH A 211 711 711 HOH TIP . J 5 HOH A 212 712 712 HOH TIP . J 5 HOH A 213 713 713 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 UDP . . . C 3 10.422 52.951 45.981 1 56.28 ? N1 UDP 1 A 1 HETATM 2 C C2 UDP . . . C 3 9.701 52.286 44.979 1 54.51 ? C2 UDP 1 A 1 HETATM 3 N N3 UDP . . . C 3 8.997 51.119 45.302 1 53.3 ? N3 UDP 1 A 1 HETATM 4 C C4 UDP . . . C 3 9.016 50.622 46.612 1 53.36 ? C4 UDP 1 A 1 HETATM 5 C C5 UDP . . . C 3 9.738 51.28 47.603 1 53.56 ? C5 UDP 1 A 1 HETATM 6 C C6 UDP . . . C 3 10.438 52.439 47.286 1 55.16 ? C6 UDP 1 A 1 HETATM 7 O O2 UDP . . . C 3 9.68 52.722 43.829 1 51.86 ? O2 UDP 1 A 1 HETATM 8 O O4 UDP . . . C 3 8.38 49.607 46.889 1 51.54 ? O4 UDP 1 A 1 HETATM 9 C C1' UDP . . . C 3 11.113 54.224 45.673 1 59.67 ? C1' UDP 1 A 1 HETATM 10 C C2' UDP . . . C 3 10.125 55.386 45.766 1 61.5 ? C2' UDP 1 A 1 HETATM 11 O O2' UDP . . . C 3 9.32 55.406 44.584 1 62.88 ? O2' UDP 1 A 1 HETATM 12 C C3' UDP . . . C 3 11.14 56.527 45.73 1 62.4 ? C3' UDP 1 A 1 HETATM 13 C C4' UDP . . . C 3 12.18 56.002 46.724 1 63.45 ? C4' UDP 1 A 1 HETATM 14 O O4' UDP . . . C 3 12.132 54.565 46.629 1 61.78 ? O4' UDP 1 A 1 HETATM 15 O O3' UDP . . . C 3 11.717 56.631 44.426 1 61.86 ? O3' UDP 1 A 1 HETATM 16 C C5' UDP . . . C 3 11.769 56.398 48.145 1 66.23 ? C5' UDP 1 A 1 HETATM 17 O O5' UDP . . . C 3 12.718 55.925 49.104 1 70.35 ? O5' UDP 1 A 1 HETATM 18 P PA UDP . . . C 3 12.378 55.99 50.677 1 71.96 ? PA UDP 1 A 1 HETATM 19 O O1A UDP . . . C 3 13.787 55.911 51.453 1 72.43 ? O1A UDP 1 A 1 HETATM 20 O O2A UDP . . . C 3 11.595 57.185 51.065 1 72.06 ? O2A UDP 1 A 1 HETATM 21 O O3A UDP . . . C 3 11.602 54.622 51.018 1 73.22 ? O3A UDP 1 A 1 HETATM 22 P PB UDP . . . C 3 12.388 53.217 50.974 1 74.57 ? PB UDP 1 A 1 HETATM 23 O O1B UDP . . . C 3 13.053 53.023 52.427 1 74.77 ? O1B UDP 1 A 1 HETATM 24 O O2B UDP . . . C 3 11.265 52.071 50.843 1 74.56 ? O2B UDP 1 A 1 HETATM 25 O O3B UDP . . . C 3 13.392 53.14 49.888 1 74.29 ? O3B UDP 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 25 #