data_1ZI9
#
_model_server_result.job_id            bAoo3T82u1WSXf4Hfybn5Q 
_model_server_result.datetime_utc      '2024-11-17 02:45:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1zi9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1102}' 
#
_entry.id    1ZI9 
#
_exptl.entry_id    1ZI9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ZI9 
_cell.length_a            48.411 
_cell.length_b            70.912 
_cell.length_c            76.93 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZI9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     1ZI9 
_atom_sites.fract_transf_matrix[1][1]    0.020656 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014102 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012999 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 2719 2719 SO4 SO4 . 
C 3 GOL A 1 1101 1101 GOL GOL . 
D 3 GOL A 1 1102 1102 GOL GOL . 
E 3 GOL A 1 1103 1103 GOL GOL . 
F 3 GOL A 1 1104 1104 GOL GOL . 
G 4 HOH A 1 2720 1 HOH HOH . 
G 4 HOH A 2 2721 2 HOH HOH . 
G 4 HOH A 3 2722 3 HOH HOH . 
G 4 HOH A 4 2723 4 HOH HOH . 
G 4 HOH A 5 2724 5 HOH HOH . 
G 4 HOH A 6 2725 6 HOH HOH . 
G 4 HOH A 7 2726 7 HOH HOH . 
G 4 HOH A 8 2727 8 HOH HOH . 
G 4 HOH A 9 2728 9 HOH HOH . 
G 4 HOH A 10 2729 10 HOH HOH . 
G 4 HOH A 11 2730 11 HOH HOH . 
G 4 HOH A 12 2731 12 HOH HOH . 
G 4 HOH A 13 2732 13 HOH HOH . 
G 4 HOH A 14 2733 14 HOH HOH . 
G 4 HOH A 15 2734 15 HOH HOH . 
G 4 HOH A 16 2735 16 HOH HOH . 
G 4 HOH A 17 2736 17 HOH HOH . 
G 4 HOH A 18 2737 18 HOH HOH . 
G 4 HOH A 19 2738 19 HOH HOH . 
G 4 HOH A 20 2739 20 HOH HOH . 
G 4 HOH A 21 2740 21 HOH HOH . 
G 4 HOH A 22 2741 22 HOH HOH . 
G 4 HOH A 23 2742 23 HOH HOH . 
G 4 HOH A 24 2743 24 HOH HOH . 
G 4 HOH A 25 2744 25 HOH HOH . 
G 4 HOH A 26 2745 26 HOH HOH . 
G 4 HOH A 27 2746 27 HOH HOH . 
G 4 HOH A 28 2747 28 HOH HOH . 
G 4 HOH A 29 2748 29 HOH HOH . 
G 4 HOH A 30 2749 30 HOH HOH . 
G 4 HOH A 31 2750 31 HOH HOH . 
G 4 HOH A 32 2751 32 HOH HOH . 
G 4 HOH A 33 2752 33 HOH HOH . 
G 4 HOH A 34 2753 34 HOH HOH . 
G 4 HOH A 35 2754 35 HOH HOH . 
G 4 HOH A 36 2755 36 HOH HOH . 
G 4 HOH A 37 2756 37 HOH HOH . 
G 4 HOH A 38 2757 38 HOH HOH . 
G 4 HOH A 39 2758 39 HOH HOH . 
G 4 HOH A 40 2759 40 HOH HOH . 
G 4 HOH A 41 2760 41 HOH HOH . 
G 4 HOH A 42 2761 42 HOH HOH . 
G 4 HOH A 43 2762 43 HOH HOH . 
G 4 HOH A 44 2763 44 HOH HOH . 
G 4 HOH A 45 2764 45 HOH HOH . 
G 4 HOH A 46 2765 46 HOH HOH . 
G 4 HOH A 47 2766 47 HOH HOH . 
G 4 HOH A 48 2767 48 HOH HOH . 
G 4 HOH A 49 2768 49 HOH HOH . 
G 4 HOH A 50 2769 50 HOH HOH . 
G 4 HOH A 51 2770 51 HOH HOH . 
G 4 HOH A 52 2771 52 HOH HOH . 
G 4 HOH A 53 2772 53 HOH HOH . 
G 4 HOH A 54 2773 54 HOH HOH . 
G 4 HOH A 55 2774 55 HOH HOH . 
G 4 HOH A 56 2775 56 HOH HOH . 
G 4 HOH A 57 2776 57 HOH HOH . 
G 4 HOH A 58 2777 58 HOH HOH . 
G 4 HOH A 59 2778 59 HOH HOH . 
G 4 HOH A 60 2779 60 HOH HOH . 
G 4 HOH A 61 2780 61 HOH HOH . 
G 4 HOH A 62 2781 62 HOH HOH . 
G 4 HOH A 63 2782 63 HOH HOH . 
G 4 HOH A 64 2783 64 HOH HOH . 
G 4 HOH A 65 2784 65 HOH HOH . 
G 4 HOH A 66 2785 66 HOH HOH . 
G 4 HOH A 67 2786 67 HOH HOH . 
G 4 HOH A 68 2787 68 HOH HOH . 
G 4 HOH A 69 2788 69 HOH HOH . 
G 4 HOH A 70 2789 70 HOH HOH . 
G 4 HOH A 71 2790 71 HOH HOH . 
G 4 HOH A 72 2791 72 HOH HOH . 
G 4 HOH A 73 2792 73 HOH HOH . 
G 4 HOH A 74 2793 74 HOH HOH . 
G 4 HOH A 75 2794 75 HOH HOH . 
G 4 HOH A 76 2795 76 HOH HOH . 
G 4 HOH A 77 2796 77 HOH HOH . 
G 4 HOH A 78 2797 78 HOH HOH . 
G 4 HOH A 79 2798 79 HOH HOH . 
G 4 HOH A 80 2799 80 HOH HOH . 
G 4 HOH A 81 2800 81 HOH HOH . 
G 4 HOH A 82 2801 82 HOH HOH . 
G 4 HOH A 83 2802 83 HOH HOH . 
G 4 HOH A 84 2803 84 HOH HOH . 
G 4 HOH A 85 2804 85 HOH HOH . 
G 4 HOH A 86 2805 86 HOH HOH . 
G 4 HOH A 87 2806 87 HOH HOH . 
G 4 HOH A 88 2807 88 HOH HOH . 
G 4 HOH A 89 2808 89 HOH HOH . 
G 4 HOH A 90 2809 90 HOH HOH . 
G 4 HOH A 91 2810 91 HOH HOH . 
G 4 HOH A 92 2811 92 HOH HOH . 
G 4 HOH A 93 2812 93 HOH HOH . 
G 4 HOH A 94 2813 94 HOH HOH . 
G 4 HOH A 95 2814 95 HOH HOH . 
G 4 HOH A 96 2815 96 HOH HOH . 
G 4 HOH A 97 2816 97 HOH HOH . 
G 4 HOH A 98 2817 98 HOH HOH . 
G 4 HOH A 99 2818 99 HOH HOH . 
G 4 HOH A 100 2819 100 HOH HOH . 
G 4 HOH A 101 2820 101 HOH HOH . 
G 4 HOH A 102 2821 102 HOH HOH . 
G 4 HOH A 103 2822 103 HOH HOH . 
G 4 HOH A 104 2823 104 HOH HOH . 
G 4 HOH A 105 2824 105 HOH HOH . 
G 4 HOH A 106 2825 106 HOH HOH . 
G 4 HOH A 107 2826 107 HOH HOH . 
G 4 HOH A 108 2827 108 HOH HOH . 
G 4 HOH A 109 2828 109 HOH HOH . 
G 4 HOH A 110 2829 110 HOH HOH . 
G 4 HOH A 111 2830 111 HOH HOH . 
G 4 HOH A 112 2831 112 HOH HOH . 
G 4 HOH A 113 2832 113 HOH HOH . 
G 4 HOH A 114 2833 114 HOH HOH . 
G 4 HOH A 115 2834 115 HOH HOH . 
G 4 HOH A 116 2835 116 HOH HOH . 
G 4 HOH A 117 2836 117 HOH HOH . 
G 4 HOH A 118 2837 118 HOH HOH . 
G 4 HOH A 119 2838 119 HOH HOH . 
G 4 HOH A 120 2839 120 HOH HOH . 
G 4 HOH A 121 2840 121 HOH HOH . 
G 4 HOH A 122 2841 122 HOH HOH . 
G 4 HOH A 123 2842 123 HOH HOH . 
G 4 HOH A 124 2843 124 HOH HOH . 
G 4 HOH A 125 2844 125 HOH HOH . 
G 4 HOH A 126 2845 126 HOH HOH . 
G 4 HOH A 127 2846 127 HOH HOH . 
G 4 HOH A 128 2847 128 HOH HOH . 
G 4 HOH A 129 2848 129 HOH HOH . 
G 4 HOH A 130 2849 130 HOH HOH . 
G 4 HOH A 131 2850 131 HOH HOH . 
G 4 HOH A 132 2851 132 HOH HOH . 
G 4 HOH A 133 2852 133 HOH HOH . 
G 4 HOH A 134 2853 134 HOH HOH . 
G 4 HOH A 135 2854 135 HOH HOH . 
G 4 HOH A 136 2855 136 HOH HOH . 
G 4 HOH A 137 2856 137 HOH HOH . 
G 4 HOH A 138 2857 138 HOH HOH . 
G 4 HOH A 139 2858 139 HOH HOH . 
G 4 HOH A 140 2859 140 HOH HOH . 
G 4 HOH A 141 2860 141 HOH HOH . 
G 4 HOH A 142 2861 142 HOH HOH . 
G 4 HOH A 143 2862 143 HOH HOH . 
G 4 HOH A 144 2863 144 HOH HOH . 
G 4 HOH A 145 2864 145 HOH HOH . 
G 4 HOH A 146 2865 146 HOH HOH . 
G 4 HOH A 147 2866 147 HOH HOH . 
G 4 HOH A 148 2867 148 HOH HOH . 
G 4 HOH A 149 2868 149 HOH HOH . 
G 4 HOH A 150 2869 150 HOH HOH . 
G 4 HOH A 151 2870 151 HOH HOH . 
G 4 HOH A 152 2871 152 HOH HOH . 
G 4 HOH A 153 2872 153 HOH HOH . 
G 4 HOH A 154 2873 154 HOH HOH . 
G 4 HOH A 155 2874 155 HOH HOH . 
G 4 HOH A 156 2875 156 HOH HOH . 
G 4 HOH A 157 2876 157 HOH HOH . 
G 4 HOH A 158 2877 158 HOH HOH . 
G 4 HOH A 159 2878 159 HOH HOH . 
G 4 HOH A 160 2879 160 HOH HOH . 
G 4 HOH A 161 2880 161 HOH HOH . 
G 4 HOH A 162 2881 162 HOH HOH . 
G 4 HOH A 163 2882 163 HOH HOH . 
G 4 HOH A 164 2883 164 HOH HOH . 
G 4 HOH A 165 2884 165 HOH HOH . 
G 4 HOH A 166 2885 166 HOH HOH . 
G 4 HOH A 167 2886 167 HOH HOH . 
G 4 HOH A 168 2887 168 HOH HOH . 
G 4 HOH A 169 2888 169 HOH HOH . 
G 4 HOH A 170 2889 170 HOH HOH . 
G 4 HOH A 171 2890 171 HOH HOH . 
G 4 HOH A 172 2891 172 HOH HOH . 
G 4 HOH A 173 2892 173 HOH HOH . 
G 4 HOH A 174 2893 174 HOH HOH . 
G 4 HOH A 175 2894 175 HOH HOH . 
G 4 HOH A 176 2895 176 HOH HOH . 
G 4 HOH A 177 2896 177 HOH HOH . 
G 4 HOH A 178 2897 178 HOH HOH . 
G 4 HOH A 179 2898 179 HOH HOH . 
G 4 HOH A 180 2899 180 HOH HOH . 
G 4 HOH A 181 2900 181 HOH HOH . 
G 4 HOH A 182 2901 182 HOH HOH . 
G 4 HOH A 183 2902 183 HOH HOH . 
G 4 HOH A 184 2903 184 HOH HOH . 
G 4 HOH A 185 2904 185 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 26.222 48.58 3.641 1 24.8 ? C1 GOL 1102 A 1 
HETATM 2 O O1 GOL . . . D 3 26.148 47.702 2.52 1 25.41 ? O1 GOL 1102 A 1 
HETATM 3 C C2 GOL . . . D 3 24.838 49.258 3.838 1 19.33 ? C2 GOL 1102 A 1 
HETATM 4 O O2 GOL . . . D 3 25.051 50.355 2.876 1 15.18 ? O2 GOL 1102 A 1 
HETATM 5 C C3 GOL . . . D 3 24.807 49.813 5.261 1 19.04 ? C3 GOL 1102 A 1 
HETATM 6 O O3 GOL . . . D 3 23.931 50.872 5.475 1 12.7 ? O3 GOL 1102 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#