data_1ZIB # _model_server_result.job_id oCG0XN9ln5z5vuU0-EIagQ _model_server_result.datetime_utc '2024-12-20 06:49:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":125}' # _entry.id 1ZIB # _exptl.entry_id 1ZIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZIB _cell.length_a 56.65 _cell.length_b 61.67 _cell.length_c 30.42 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 40 A HIS 40 1_555 B CU CU . A CU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A SG CYS 78 A CYS 78 1_555 B CU CU . A CU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc3 A ND1 HIS 81 A HIS 81 1_555 B CU CU . A CU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc4 A SD MET 86 A MET 86 1_555 B CU CU . A CU 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZIB _atom_sites.fract_transf_matrix[1][1] 0.017652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016215 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.032873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 125 125 CU CU . C 3 HOH A 1 126 126 HOH HOH . C 3 HOH A 2 127 127 HOH HOH . C 3 HOH A 3 128 128 HOH HOH . C 3 HOH A 4 129 129 HOH HOH . C 3 HOH A 5 130 130 HOH HOH . C 3 HOH A 6 131 131 HOH HOH . C 3 HOH A 7 132 132 HOH HOH . C 3 HOH A 8 133 133 HOH HOH . C 3 HOH A 9 134 134 HOH HOH . C 3 HOH A 10 135 135 HOH HOH . C 3 HOH A 11 136 136 HOH HOH . C 3 HOH A 12 137 137 HOH HOH . C 3 HOH A 13 138 138 HOH HOH . C 3 HOH A 14 139 139 HOH HOH . C 3 HOH A 15 140 140 HOH HOH . C 3 HOH A 16 141 141 HOH HOH . C 3 HOH A 17 142 142 HOH HOH . C 3 HOH A 18 143 143 HOH HOH . C 3 HOH A 19 144 144 HOH HOH . C 3 HOH A 20 145 145 HOH HOH . C 3 HOH A 21 146 146 HOH HOH . C 3 HOH A 22 147 147 HOH HOH . C 3 HOH A 23 148 148 HOH HOH . C 3 HOH A 24 149 149 HOH HOH . C 3 HOH A 25 150 150 HOH HOH . C 3 HOH A 26 151 151 HOH HOH . C 3 HOH A 27 152 152 HOH HOH . C 3 HOH A 28 153 153 HOH HOH . C 3 HOH A 29 154 154 HOH HOH . C 3 HOH A 30 155 155 HOH HOH . C 3 HOH A 31 156 156 HOH HOH . C 3 HOH A 32 157 157 HOH HOH . C 3 HOH A 33 158 158 HOH HOH . C 3 HOH A 34 159 159 HOH HOH . C 3 HOH A 35 160 160 HOH HOH . C 3 HOH A 36 161 161 HOH HOH . C 3 HOH A 37 162 162 HOH HOH . C 3 HOH A 38 163 163 HOH HOH . C 3 HOH A 39 164 164 HOH HOH . C 3 HOH A 40 165 165 HOH HOH . C 3 HOH A 41 166 166 HOH HOH . C 3 HOH A 42 167 167 HOH HOH . C 3 HOH A 43 168 168 HOH HOH . C 3 HOH A 44 169 169 HOH HOH . C 3 HOH A 45 170 170 HOH HOH . C 3 HOH A 46 171 171 HOH HOH . C 3 HOH A 47 172 172 HOH HOH . C 3 HOH A 48 173 173 HOH HOH . C 3 HOH A 49 174 174 HOH HOH . C 3 HOH A 50 175 175 HOH HOH . C 3 HOH A 51 176 176 HOH HOH . C 3 HOH A 52 177 177 HOH HOH . C 3 HOH A 53 178 178 HOH HOH . C 3 HOH A 54 179 179 HOH HOH . C 3 HOH A 55 180 180 HOH HOH . C 3 HOH A 56 181 181 HOH HOH . C 3 HOH A 57 182 182 HOH HOH . C 3 HOH A 58 183 183 HOH HOH . C 3 HOH A 59 184 184 HOH HOH . C 3 HOH A 60 185 185 HOH HOH . C 3 HOH A 61 186 186 HOH HOH . C 3 HOH A 62 187 187 HOH HOH . C 3 HOH A 63 188 188 HOH HOH . C 3 HOH A 64 189 189 HOH HOH . C 3 HOH A 65 190 190 HOH HOH . C 3 HOH A 66 191 191 HOH HOH . C 3 HOH A 67 192 192 HOH HOH . C 3 HOH A 68 193 193 HOH HOH . C 3 HOH A 69 194 194 HOH HOH . C 3 HOH A 70 195 195 HOH HOH . C 3 HOH A 71 196 196 HOH HOH . C 3 HOH A 72 197 197 HOH HOH . C 3 HOH A 73 198 198 HOH HOH . C 3 HOH A 74 199 199 HOH HOH . C 3 HOH A 75 200 200 HOH HOH . C 3 HOH A 76 201 201 HOH HOH . C 3 HOH A 77 202 202 HOH HOH . C 3 HOH A 78 203 203 HOH HOH . C 3 HOH A 79 204 204 HOH HOH . C 3 HOH A 80 205 205 HOH HOH . C 3 HOH A 81 206 206 HOH HOH . C 3 HOH A 82 207 207 HOH HOH . C 3 HOH A 83 208 208 HOH HOH . C 3 HOH A 84 209 209 HOH HOH . C 3 HOH A 85 210 210 HOH HOH . C 3 HOH A 86 211 211 HOH HOH . C 3 HOH A 87 212 212 HOH HOH . C 3 HOH A 88 213 213 HOH HOH . C 3 HOH A 89 214 214 HOH HOH . C 3 HOH A 90 215 215 HOH HOH . C 3 HOH A 91 216 216 HOH HOH . C 3 HOH A 92 217 217 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 30.337 _atom_site.Cartn_y 17.296 _atom_site.Cartn_z -0.919 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 125 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #