data_1ZIS # _model_server_result.job_id P_ZeLjrkxvEQAQc3yYKFGQ _model_server_result.datetime_utc '2024-10-11 12:29:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zis # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":507}' # _entry.id 1ZIS # _exptl.entry_id 1ZIS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ZIS _cell.length_a 153.69 _cell.length_b 153.69 _cell.length_c 296.3 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZIS _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 PISA 60-meric 60 software_defined_assembly 3 PISA 60-meric 60 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T 1 1 F,G,H,I,J,U,V,W,X,Y,Z,AA,BA,CA,DA 2 1 F,G,H,I,J,U,V,W,X,Y,Z,AA,BA,CA,DA 3 1,2,3,4,5,6 A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T 3 7,8,9,10,11,12 A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T 4 1,13,14,15,16,17 F,G,H,I,J,U,V,W,X,Y,Z,AA,BA,CA,DA 4 18,19,20,10,21,22 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 4 'crystal symmetry operation' 7_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 296.3 5 'crystal symmetry operation' 8_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 296.3 6 'crystal symmetry operation' 9_556 -x,-x+y,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 296.3 7 'crystal symmetry operation' 4_665 -x+1,-y+1,z+1/2 -1 0 0 0 -1 0 0 0 1 76.845 133.099444 148.15 8 'crystal symmetry operation' 5_455 y-1,-x+y,z+1/2 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 -153.69 0 148.15 9 'crystal symmetry operation' 6_545 x-y,x-1,z+1/2 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 76.845 -133.099444 148.15 10 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 76.845 133.099444 148.15 11 'crystal symmetry operation' 11_545 -x+y,y-1,-z+1/2 -1 0 0 0 1 0 0 0 -1 76.845 -133.099444 148.15 12 'crystal symmetry operation' 12_455 x-1,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -153.69 0 148.15 13 'crystal symmetry operation' 2_765 -y+2,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 230.535 133.099444 0 14 'crystal symmetry operation' 3_675 -x+y+1,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 266.198889 0 15 'crystal symmetry operation' 7_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 16 'crystal symmetry operation' 8_675 x-y+1,-y+2,-z 1 0 0 0 -1 0 0 0 -1 0 266.198889 0 17 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 230.535 133.099444 0 18 'crystal symmetry operation' 4_664 -x+1,-y+1,z-1/2 -1 0 0 0 -1 0 0 0 1 76.845 133.099444 -148.15 19 'crystal symmetry operation' 5_664 y+1,-x+y+1,z-1/2 0.5 0.866025 0 -0.866025 0.5 0 0 0 1 76.845 133.099444 -148.15 20 'crystal symmetry operation' 6_664 x-y+1,x+1,z-1/2 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 76.845 133.099444 -148.15 21 'crystal symmetry operation' 11_665 -x+y+1,y+1,-z+1/2 -1 0 0 0 1 0 0 0 -1 76.845 133.099444 148.15 22 'crystal symmetry operation' 12_665 x+1,x-y+1,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 76.845 133.099444 148.15 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 K N N ? 2 M N N ? 2 O N N ? 2 Q N N ? 2 R N N ? 2 U N N ? 2 W N N ? 2 Y N N ? 2 AA N N ? 2 CA N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 293 n n P O2 PO4 sing 294 n n P O3 PO4 sing 295 n n P O4 PO4 sing 296 n n # _atom_sites.entry_id 1ZIS _atom_sites.fract_transf_matrix[1][1] 0.006507 _atom_sites.fract_transf_matrix[1][2] 0.003757 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007513 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 PO4 A 1 501 501 PO4 PO4 . L 3 INI A 1 200 200 INI INI . M 2 PO4 B 1 502 502 PO4 PO4 . N 3 INI B 1 201 201 INI INI . O 2 PO4 C 1 503 503 PO4 PO4 . P 3 INI C 1 202 202 INI INI . Q 2 PO4 D 1 504 504 PO4 PO4 . R 2 PO4 D 1 505 505 PO4 PO4 . S 3 INI D 1 203 203 INI INI . T 3 INI E 1 204 204 INI INI . U 2 PO4 F 1 510 510 PO4 PO4 . V 3 INI F 1 205 205 INI INI . W 2 PO4 G 1 506 506 PO4 PO4 . X 3 INI G 1 206 206 INI INI . Y 2 PO4 H 1 508 508 PO4 PO4 . Z 3 INI H 1 207 207 INI INI . AA 2 PO4 I 1 507 507 PO4 PO4 . BA 3 INI I 1 208 208 INI INI . CA 2 PO4 J 1 509 509 PO4 PO4 . DA 3 INI J 1 209 209 INI INI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . AA 2 -16.455 42.918 149.837 1 29.56 ? P PO4 507 I 1 HETATM 2 O O1 PO4 . . . AA 2 -17.059 41.556 149.688 1 53.38 ? O1 PO4 507 I 1 HETATM 3 O O2 PO4 . . . AA 2 -15.497 43.151 148.734 1 53.38 ? O2 PO4 507 I 1 HETATM 4 O O3 PO4 . . . AA 2 -15.736 43.015 151.15 1 53.38 ? O3 PO4 507 I 1 HETATM 5 O O4 PO4 . . . AA 2 -17.531 43.948 149.773 1 53.38 ? O4 PO4 507 I 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #