data_1ZIV
#
_model_server_result.job_id            nfEQMLwMXxYFph26Eo3fdg 
_model_server_result.datetime_utc      '2025-03-04 08:54:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ziv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3}' 
#
_entry.id    1ZIV 
#
_exptl.entry_id    1ZIV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BETA-MERCAPTOETHANOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ZIV 
_cell.length_a            45.308 
_cell.length_b            80.9 
_cell.length_c            100.545 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZIV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        17 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D S2 BME . A BME 3 1_555 A SG CYS 89 A CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
covale ? covale2 E S2 BME . A BME 4 1_555 A SG CYS 326 A CYS 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc1 B CA CA . A CA 1 1_555 A OE2 GLU 276 A GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc2 B CA CA . A CA 1 1_555 A OE1 GLU 276 A GLU 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? 
metalc ? metalc3 B CA CA . A CA 1 1_555 A OD2 ASP 283 A ASP 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? 
metalc ? metalc4 B CA CA . A CA 1 1_555 A OD1 ASP 283 A ASP 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? 
metalc ? metalc5 B CA CA . A CA 1 1_555 A O LEU 304 A LEU 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc6 B CA CA . A CA 1 1_555 A OD1 ASP 306 A ASP 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc7 B CA CA . A CA 1 1_555 A O GLU 308 A GLU 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc8 C CA CA . A CA 2 1_555 A O LEU 73 A LEU 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? 
metalc ? metalc9 C CA CA . A CA 2 1_555 A O GLY 75 A GLY 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc10 C CA CA . A CA 2 1_555 A OD2 ASP 80 A ASP 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? 
metalc ? metalc11 C CA CA . A CA 2 1_555 A OD1 ASP 80 A ASP 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
metalc ? metalc12 C CA CA . A CA 2 1_555 A OE1 GLU 159 A GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? 
metalc ? metalc13 C CA CA . A CA 2 1_555 A OE2 GLU 159 A GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc14 C CA CA . A CA 2 1_555 F O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                BME 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BETA-MERCAPTOETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BME sing 70 n n 
C1 O1 BME sing 71 n n 
C1 H11 BME sing 72 n n 
C1 H12 BME sing 73 n n 
C2 S2 BME sing 74 n n 
C2 H21 BME sing 75 n n 
C2 H22 BME sing 76 n n 
O1 HO1 BME sing 77 n n 
S2 HS2 BME sing 78 n n 
#
_atom_sites.entry_id                     1ZIV 
_atom_sites.fract_transf_matrix[1][1]    0.022071 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012361 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009946 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 1 1 CA CA . 
C 2 CA A 1 2 2 CA CA . 
D 3 BME A 1 3 3 BME SEO . 
E 3 BME A 1 4 4 BME SEO . 
F 4 HOH A 1 348 5 HOH HOH . 
F 4 HOH A 2 349 6 HOH HOH . 
F 4 HOH A 3 350 7 HOH HOH . 
F 4 HOH A 4 351 8 HOH HOH . 
F 4 HOH A 5 352 9 HOH HOH . 
F 4 HOH A 6 353 10 HOH HOH . 
F 4 HOH A 7 354 11 HOH HOH . 
F 4 HOH A 8 355 12 HOH HOH . 
F 4 HOH A 9 356 13 HOH HOH . 
F 4 HOH A 10 357 14 HOH HOH . 
F 4 HOH A 11 358 15 HOH HOH . 
F 4 HOH A 12 359 16 HOH HOH . 
F 4 HOH A 13 360 17 HOH HOH . 
F 4 HOH A 14 361 18 HOH HOH . 
F 4 HOH A 15 362 19 HOH HOH . 
F 4 HOH A 16 363 20 HOH HOH . 
F 4 HOH A 17 364 21 HOH HOH . 
F 4 HOH A 18 365 22 HOH HOH . 
F 4 HOH A 19 366 23 HOH HOH . 
F 4 HOH A 20 367 24 HOH HOH . 
F 4 HOH A 21 368 25 HOH HOH . 
F 4 HOH A 22 369 26 HOH HOH . 
F 4 HOH A 23 370 27 HOH HOH . 
F 4 HOH A 24 371 28 HOH HOH . 
F 4 HOH A 25 372 29 HOH HOH . 
F 4 HOH A 26 373 30 HOH HOH . 
F 4 HOH A 27 374 31 HOH HOH . 
F 4 HOH A 28 375 32 HOH HOH . 
F 4 HOH A 29 376 33 HOH HOH . 
F 4 HOH A 30 377 34 HOH HOH . 
F 4 HOH A 31 378 35 HOH HOH . 
F 4 HOH A 32 379 36 HOH HOH . 
F 4 HOH A 33 380 37 HOH HOH . 
F 4 HOH A 34 381 38 HOH HOH . 
F 4 HOH A 35 382 39 HOH HOH . 
F 4 HOH A 36 383 40 HOH HOH . 
F 4 HOH A 37 384 41 HOH HOH . 
F 4 HOH A 38 385 42 HOH HOH . 
F 4 HOH A 39 386 43 HOH HOH . 
F 4 HOH A 40 387 44 HOH HOH . 
F 4 HOH A 41 388 45 HOH HOH . 
F 4 HOH A 42 389 46 HOH HOH . 
F 4 HOH A 43 390 47 HOH HOH . 
F 4 HOH A 44 391 48 HOH HOH . 
F 4 HOH A 45 392 49 HOH HOH . 
F 4 HOH A 46 393 50 HOH HOH . 
F 4 HOH A 47 394 51 HOH HOH . 
F 4 HOH A 48 395 52 HOH HOH . 
F 4 HOH A 49 396 53 HOH HOH . 
F 4 HOH A 50 397 54 HOH HOH . 
F 4 HOH A 51 398 55 HOH HOH . 
F 4 HOH A 52 399 56 HOH HOH . 
F 4 HOH A 53 400 57 HOH HOH . 
F 4 HOH A 54 401 58 HOH HOH . 
F 4 HOH A 55 402 59 HOH HOH . 
F 4 HOH A 56 403 60 HOH HOH . 
F 4 HOH A 57 404 61 HOH HOH . 
F 4 HOH A 58 405 62 HOH HOH . 
F 4 HOH A 59 406 63 HOH HOH . 
F 4 HOH A 60 407 64 HOH HOH . 
F 4 HOH A 61 408 65 HOH HOH . 
F 4 HOH A 62 409 66 HOH HOH . 
F 4 HOH A 63 410 67 HOH HOH . 
F 4 HOH A 64 411 68 HOH HOH . 
F 4 HOH A 65 412 69 HOH HOH . 
F 4 HOH A 66 413 70 HOH HOH . 
F 4 HOH A 67 414 71 HOH HOH . 
F 4 HOH A 68 415 72 HOH HOH . 
F 4 HOH A 69 416 73 HOH HOH . 
F 4 HOH A 70 417 74 HOH HOH . 
F 4 HOH A 71 418 75 HOH HOH . 
F 4 HOH A 72 419 76 HOH HOH . 
F 4 HOH A 73 420 77 HOH HOH . 
F 4 HOH A 74 421 78 HOH HOH . 
F 4 HOH A 75 422 79 HOH HOH . 
F 4 HOH A 76 423 80 HOH HOH . 
F 4 HOH A 77 424 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BME . . . D 3 24.428 55.929 49.459 1 72.79 ? C1 BME 3 A 1 
HETATM 2 C C2 BME . . . D 3 23.403 56.59 50.376 1 72.36 ? C2 BME 3 A 1 
HETATM 3 O O1 BME . . . D 3 24.06 54.602 49.026 1 75.46 ? O1 BME 3 A 1 
HETATM 4 S S2 BME . . . D 3 21.796 56.848 49.563 1 82.81 ? S2 BME 3 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#