data_1ZJP
#
_model_server_result.job_id            30vm-2mNwmkzVXSDBZ7zYA 
_model_server_result.datetime_utc      '2024-12-04 19:48:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1zjp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":450}' 
#
_entry.id    1ZJP 
#
_exptl.entry_id    1ZJP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ZJP 
_cell.length_a            52.42 
_cell.length_b            150.12 
_cell.length_c            79.14 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ZJP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA,PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1 
A,B,C,D,E,F,G,H,I,J,K,L 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 52.42 0 39.57 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             I 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 K O1A UDP . A UDP 2 1_555 I MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc2 K O3B UDP . A UDP 2 1_555 I MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? 
metalc ? metalc3 A SG CYS 19 A CYS 80 1_555 E HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? 
metalc ? metalc4 A O GLY 37 A GLY 98 1_555 E HG HG . A HG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? 
metalc ? metalc5 A OG1 THR 58 A THR 119 1_555 C HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? 
metalc ? metalc6 A SG CYS 148 A CYS 209 1_555 C HG HG . A HG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? 
metalc ? metalc7 A O VAL 149 A VAL 210 1_555 F HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.418 ? 
metalc ? metalc8 A N VAL 149 A VAL 210 1_555 F HG HG . A HG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.443 ? 
metalc ? metalc9 A OD1 ASP 152 A ASP 213 1_555 I MN MN . A MN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc10 A SG CYS 223 A CYS 284 1_555 B HG HG . A HG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc11 A N CYS 223 A CYS 284 1_555 D HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.423 ? 
metalc ? metalc12 A SG CYS 223 A CYS 284 1_555 D HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc13 A SD MET 227 A MET 288 1_555 H HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? 
metalc ? metalc14 A OD2 ASP 241 A ASP 302 1_555 H HG HG . A HG 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.15 ? 
metalc ? metalc15 A O HIS 244 A HIS 305 1_555 D HG HG . A HG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.189 ? 
metalc ? metalc16 B HG HG . A HG 401 1_555 L O HOH . A HOH 688 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? 
metalc ? metalc17 C HG HG . A HG 402 1_555 L O HOH . A HOH 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? 
metalc ? metalc18 D HG HG . A HG 403 1_555 L O HOH . A HOH 687 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? 
metalc ? metalc19 E HG HG . A HG 404 1_555 L O HOH . A HOH 676 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
metalc ? metalc20 F HG HG . A HG 405 1_555 G CL CL . A CL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.839 ? 
metalc ? metalc21 F HG HG . A HG 405 1_555 L O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1ZJP 
_atom_sites.fract_transf_matrix[1][1]    0.019077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006661 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012636 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HG A 1 401 401 HG HG . 
C 2 HG A 1 402 402 HG HG . 
D 2 HG A 1 403 403 HG HG . 
E 2 HG A 1 404 404 HG HG . 
F 2 HG A 1 405 405 HG HG . 
G 3 CL A 1 406 406 CL CL . 
H 2 HG A 1 407 407 HG HG . 
I 4 MN A 1 450 450 MN MN . 
J 5 DR4 A 1 1 1 DR4 DRG . 
K 6 UDP A 1 2 2 UDP UDP . 
L 7 HOH A 1 501 501 HOH TIP . 
L 7 HOH A 2 502 502 HOH TIP . 
L 7 HOH A 3 503 503 HOH TIP . 
L 7 HOH A 4 504 504 HOH TIP . 
L 7 HOH A 5 505 505 HOH TIP . 
L 7 HOH A 6 506 506 HOH TIP . 
L 7 HOH A 7 507 507 HOH TIP . 
L 7 HOH A 8 508 508 HOH TIP . 
L 7 HOH A 9 509 509 HOH TIP . 
L 7 HOH A 10 510 510 HOH TIP . 
L 7 HOH A 11 511 511 HOH TIP . 
L 7 HOH A 12 512 512 HOH TIP . 
L 7 HOH A 13 513 513 HOH TIP . 
L 7 HOH A 14 514 514 HOH TIP . 
L 7 HOH A 15 515 515 HOH TIP . 
L 7 HOH A 16 516 516 HOH TIP . 
L 7 HOH A 17 517 517 HOH TIP . 
L 7 HOH A 18 518 518 HOH TIP . 
L 7 HOH A 19 519 519 HOH TIP . 
L 7 HOH A 20 520 520 HOH TIP . 
L 7 HOH A 21 521 521 HOH TIP . 
L 7 HOH A 22 522 522 HOH TIP . 
L 7 HOH A 23 523 523 HOH TIP . 
L 7 HOH A 24 524 524 HOH TIP . 
L 7 HOH A 25 525 525 HOH TIP . 
L 7 HOH A 26 526 526 HOH TIP . 
L 7 HOH A 27 527 527 HOH TIP . 
L 7 HOH A 28 528 528 HOH TIP . 
L 7 HOH A 29 529 529 HOH TIP . 
L 7 HOH A 30 530 530 HOH TIP . 
L 7 HOH A 31 531 531 HOH TIP . 
L 7 HOH A 32 532 532 HOH TIP . 
L 7 HOH A 33 533 533 HOH TIP . 
L 7 HOH A 34 534 534 HOH TIP . 
L 7 HOH A 35 535 535 HOH TIP . 
L 7 HOH A 36 536 536 HOH TIP . 
L 7 HOH A 37 537 537 HOH TIP . 
L 7 HOH A 38 538 538 HOH TIP . 
L 7 HOH A 39 539 539 HOH TIP . 
L 7 HOH A 40 540 540 HOH TIP . 
L 7 HOH A 41 541 541 HOH TIP . 
L 7 HOH A 42 542 542 HOH TIP . 
L 7 HOH A 43 543 543 HOH TIP . 
L 7 HOH A 44 544 544 HOH TIP . 
L 7 HOH A 45 545 545 HOH TIP . 
L 7 HOH A 46 546 546 HOH TIP . 
L 7 HOH A 47 548 548 HOH TIP . 
L 7 HOH A 48 549 549 HOH TIP . 
L 7 HOH A 49 550 550 HOH TIP . 
L 7 HOH A 50 551 551 HOH TIP . 
L 7 HOH A 51 552 552 HOH TIP . 
L 7 HOH A 52 553 553 HOH TIP . 
L 7 HOH A 53 554 554 HOH TIP . 
L 7 HOH A 54 555 555 HOH TIP . 
L 7 HOH A 55 556 556 HOH TIP . 
L 7 HOH A 56 557 557 HOH TIP . 
L 7 HOH A 57 558 558 HOH TIP . 
L 7 HOH A 58 559 559 HOH TIP . 
L 7 HOH A 59 560 560 HOH TIP . 
L 7 HOH A 60 561 561 HOH TIP . 
L 7 HOH A 61 562 562 HOH TIP . 
L 7 HOH A 62 563 563 HOH TIP . 
L 7 HOH A 63 564 564 HOH TIP . 
L 7 HOH A 64 565 565 HOH TIP . 
L 7 HOH A 65 566 566 HOH TIP . 
L 7 HOH A 66 567 567 HOH TIP . 
L 7 HOH A 67 568 568 HOH TIP . 
L 7 HOH A 68 569 569 HOH TIP . 
L 7 HOH A 69 570 570 HOH TIP . 
L 7 HOH A 70 571 571 HOH TIP . 
L 7 HOH A 71 572 572 HOH TIP . 
L 7 HOH A 72 573 573 HOH TIP . 
L 7 HOH A 73 574 574 HOH TIP . 
L 7 HOH A 74 575 575 HOH TIP . 
L 7 HOH A 75 576 576 HOH TIP . 
L 7 HOH A 76 577 577 HOH TIP . 
L 7 HOH A 77 578 578 HOH TIP . 
L 7 HOH A 78 579 579 HOH TIP . 
L 7 HOH A 79 580 580 HOH TIP . 
L 7 HOH A 80 581 581 HOH TIP . 
L 7 HOH A 81 582 582 HOH TIP . 
L 7 HOH A 82 583 583 HOH TIP . 
L 7 HOH A 83 584 584 HOH TIP . 
L 7 HOH A 84 585 585 HOH TIP . 
L 7 HOH A 85 586 586 HOH TIP . 
L 7 HOH A 86 587 587 HOH TIP . 
L 7 HOH A 87 588 588 HOH TIP . 
L 7 HOH A 88 589 589 HOH TIP . 
L 7 HOH A 89 590 590 HOH TIP . 
L 7 HOH A 90 591 591 HOH TIP . 
L 7 HOH A 91 592 592 HOH TIP . 
L 7 HOH A 92 593 593 HOH TIP . 
L 7 HOH A 93 594 594 HOH TIP . 
L 7 HOH A 94 595 595 HOH TIP . 
L 7 HOH A 95 596 596 HOH TIP . 
L 7 HOH A 96 597 597 HOH TIP . 
L 7 HOH A 97 598 598 HOH TIP . 
L 7 HOH A 98 599 599 HOH TIP . 
L 7 HOH A 99 600 600 HOH TIP . 
L 7 HOH A 100 601 601 HOH TIP . 
L 7 HOH A 101 602 602 HOH TIP . 
L 7 HOH A 102 603 603 HOH TIP . 
L 7 HOH A 103 604 604 HOH TIP . 
L 7 HOH A 104 605 605 HOH TIP . 
L 7 HOH A 105 606 606 HOH TIP . 
L 7 HOH A 106 607 607 HOH TIP . 
L 7 HOH A 107 608 608 HOH TIP . 
L 7 HOH A 108 609 609 HOH TIP . 
L 7 HOH A 109 610 610 HOH TIP . 
L 7 HOH A 110 611 611 HOH TIP . 
L 7 HOH A 111 612 612 HOH TIP . 
L 7 HOH A 112 613 613 HOH TIP . 
L 7 HOH A 113 614 614 HOH TIP . 
L 7 HOH A 114 615 615 HOH TIP . 
L 7 HOH A 115 616 616 HOH TIP . 
L 7 HOH A 116 617 617 HOH TIP . 
L 7 HOH A 117 618 618 HOH TIP . 
L 7 HOH A 118 619 619 HOH TIP . 
L 7 HOH A 119 620 620 HOH TIP . 
L 7 HOH A 120 621 621 HOH TIP . 
L 7 HOH A 121 622 622 HOH TIP . 
L 7 HOH A 122 623 623 HOH TIP . 
L 7 HOH A 123 624 624 HOH TIP . 
L 7 HOH A 124 625 625 HOH TIP . 
L 7 HOH A 125 626 626 HOH TIP . 
L 7 HOH A 126 627 627 HOH TIP . 
L 7 HOH A 127 628 628 HOH TIP . 
L 7 HOH A 128 629 629 HOH TIP . 
L 7 HOH A 129 630 630 HOH TIP . 
L 7 HOH A 130 631 631 HOH TIP . 
L 7 HOH A 131 632 632 HOH TIP . 
L 7 HOH A 132 633 633 HOH TIP . 
L 7 HOH A 133 634 634 HOH TIP . 
L 7 HOH A 134 635 635 HOH TIP . 
L 7 HOH A 135 636 636 HOH TIP . 
L 7 HOH A 136 637 637 HOH TIP . 
L 7 HOH A 137 638 638 HOH TIP . 
L 7 HOH A 138 639 639 HOH TIP . 
L 7 HOH A 139 640 640 HOH TIP . 
L 7 HOH A 140 641 641 HOH TIP . 
L 7 HOH A 141 642 642 HOH TIP . 
L 7 HOH A 142 643 643 HOH TIP . 
L 7 HOH A 143 644 644 HOH TIP . 
L 7 HOH A 144 645 645 HOH TIP . 
L 7 HOH A 145 646 646 HOH TIP . 
L 7 HOH A 146 647 647 HOH TIP . 
L 7 HOH A 147 648 648 HOH TIP . 
L 7 HOH A 148 649 649 HOH TIP . 
L 7 HOH A 149 650 650 HOH TIP . 
L 7 HOH A 150 651 651 HOH TIP . 
L 7 HOH A 151 652 652 HOH TIP . 
L 7 HOH A 152 653 653 HOH TIP . 
L 7 HOH A 153 654 654 HOH TIP . 
L 7 HOH A 154 655 655 HOH TIP . 
L 7 HOH A 155 656 656 HOH TIP . 
L 7 HOH A 156 657 657 HOH TIP . 
L 7 HOH A 157 658 658 HOH TIP . 
L 7 HOH A 158 659 659 HOH TIP . 
L 7 HOH A 159 660 660 HOH TIP . 
L 7 HOH A 160 661 661 HOH TIP . 
L 7 HOH A 161 662 662 HOH TIP . 
L 7 HOH A 162 663 663 HOH TIP . 
L 7 HOH A 163 664 664 HOH TIP . 
L 7 HOH A 164 665 665 HOH TIP . 
L 7 HOH A 165 666 666 HOH TIP . 
L 7 HOH A 166 667 667 HOH TIP . 
L 7 HOH A 167 668 668 HOH TIP . 
L 7 HOH A 168 669 669 HOH TIP . 
L 7 HOH A 169 670 670 HOH TIP . 
L 7 HOH A 170 671 671 HOH TIP . 
L 7 HOH A 171 672 672 HOH TIP . 
L 7 HOH A 172 673 673 HOH TIP . 
L 7 HOH A 173 674 674 HOH TIP . 
L 7 HOH A 174 675 675 HOH TIP . 
L 7 HOH A 175 676 676 HOH TIP . 
L 7 HOH A 176 677 677 HOH TIP . 
L 7 HOH A 177 678 678 HOH TIP . 
L 7 HOH A 178 679 679 HOH TIP . 
L 7 HOH A 179 680 680 HOH TIP . 
L 7 HOH A 180 681 681 HOH TIP . 
L 7 HOH A 181 682 682 HOH TIP . 
L 7 HOH A 182 683 683 HOH TIP . 
L 7 HOH A 183 684 684 HOH TIP . 
L 7 HOH A 184 685 685 HOH TIP . 
L 7 HOH A 185 686 686 HOH TIP . 
L 7 HOH A 186 687 687 HOH TIP . 
L 7 HOH A 187 688 688 HOH TIP . 
L 7 HOH A 188 689 689 HOH TIP . 
L 7 HOH A 189 690 690 HOH TIP . 
L 7 HOH A 190 691 691 HOH TIP . 
L 7 HOH A 191 692 692 HOH TIP . 
L 7 HOH A 192 693 693 HOH TIP . 
L 7 HOH A 193 694 694 HOH TIP . 
L 7 HOH A 194 695 695 HOH TIP . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         I 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               10.826 
_atom_site.Cartn_y               58.065 
_atom_site.Cartn_z               43.84 
_atom_site.occupancy             0.2 
_atom_site.B_iso_or_equiv        32.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           450 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           683 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           1 
#