data_1ZMI # _model_server_result.job_id HfXCoZoidsLIzxy7wjhSKA _model_server_result.datetime_utc '2025-03-11 10:43:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zmi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 1ZMI # _exptl.entry_id 1ZMI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ZMI _cell.length_a 71.685 _cell.length_b 71.685 _cell.length_c 54.882 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZMI _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA octameric 8 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 PISA tetrameric 4 software_defined_assembly 5 PISA tetrameric 4 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M 1 1 C,D,N,O 2 1 A,B,E,F,G,H,I,J,K,L,M 3 1,2 C,D,N,O 3 3,4 A,B,E,F,G,H,I,J,K,L,M 4 1 C,D,N,O 4 4 A,B,E,F,G,H,I,J,K,L,M 5 1 C,D,N,O 5 5 A,B,E,F,G,H,I,J,K,L,M 6 1 C,D,N,O 6 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-x+y,-z+2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 36.588 3 'crystal symmetry operation' 2_554 -y,x-y,z-1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 -18.294 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 54.882 5 'crystal symmetry operation' 5_566 x-y,-y+1,-z+4/3 1 0 0 0 -1 0 0 0 -1 -35.8425 62.081031 73.176 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 1 A CYS 1 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf2 A SG CYS 3 A CYS 3 1_555 A SG CYS 18 A CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf3 A SG CYS 8 A CYS 8 1_555 A SG CYS 28 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf4 B SG CYS 1 B CYS 1 1_555 B SG CYS 29 B CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? disulf ? disulf5 B SG CYS 3 B CYS 3 1_555 B SG CYS 18 B CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf6 B SG CYS 8 B CYS 8 1_555 B SG CYS 28 B CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf7 C SG CYS 1 C CYS 1 1_555 C SG CYS 29 C CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf8 C SG CYS 3 C CYS 3 1_555 C SG CYS 18 C CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 C SG CYS 8 C CYS 8 1_555 C SG CYS 28 C CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf10 D SG CYS 1 D CYS 1 1_555 D SG CYS 29 D CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf11 D SG CYS 3 D CYS 3 1_555 D SG CYS 18 D CYS 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf12 D SG CYS 8 D CYS 8 1_555 D SG CYS 28 D CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? covale ? covale1 A C TYR 15 A TYR 15 1_555 A N DAL 16 A DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale2 A C DAL 16 A DAL 16 1_555 A N THR 17 A THR 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 B C TYR 15 B TYR 15 1_555 B N DAL 16 B DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 B C DAL 16 B DAL 16 1_555 B N THR 17 B THR 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale5 C C TYR 15 C TYR 15 1_555 C N DAL 16 C DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 C C DAL 16 C DAL 16 1_555 C N THR 17 C THR 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 D C TYR 15 D TYR 15 1_555 D N DAL 16 D DAL 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale8 D C DAL 16 D DAL 16 1_555 D N THR 17 D THR 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 207 n n S O2 SO4 doub 208 n n S O3 SO4 sing 209 n n S O4 SO4 sing 210 n n # _atom_sites.entry_id 1ZMI _atom_sites.fract_transf_matrix[1][1] 0.01395 _atom_sites.fract_transf_matrix[1][2] 0.008054 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018221 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 501 501 GOL GOL . F 2 GOL A 1 507 507 GOL GOL . G 3 SO4 B 1 401 401 SO4 SO4 . H 3 SO4 B 1 402 402 SO4 SO4 . I 3 SO4 B 1 403 403 SO4 SO4 . J 2 GOL B 1 502 502 GOL GOL . K 2 GOL B 1 503 503 GOL GOL . L 4 HOH A 1 102 102 HOH HOH . L 4 HOH A 2 103 103 HOH HOH . L 4 HOH A 3 105 105 HOH HOH . L 4 HOH A 4 106 106 HOH HOH . L 4 HOH A 5 108 108 HOH HOH . L 4 HOH A 6 120 120 HOH HOH . L 4 HOH A 7 126 126 HOH HOH . L 4 HOH A 8 127 127 HOH HOH . L 4 HOH A 9 147 147 HOH HOH . L 4 HOH A 10 148 148 HOH HOH . L 4 HOH A 11 154 154 HOH HOH . L 4 HOH A 12 161 161 HOH HOH . L 4 HOH A 13 163 163 HOH HOH . L 4 HOH A 14 170 170 HOH HOH . L 4 HOH A 15 176 176 HOH HOH . L 4 HOH A 16 177 177 HOH HOH . L 4 HOH A 17 182 182 HOH HOH . L 4 HOH A 18 186 186 HOH HOH . L 4 HOH A 19 188 188 HOH HOH . L 4 HOH A 20 193 193 HOH HOH . L 4 HOH A 21 197 197 HOH HOH . L 4 HOH A 22 203 203 HOH HOH . L 4 HOH A 23 211 211 HOH HOH . L 4 HOH A 24 214 214 HOH HOH . L 4 HOH A 25 222 222 HOH HOH . L 4 HOH A 26 225 225 HOH HOH . L 4 HOH A 27 226 226 HOH HOH . L 4 HOH A 28 230 230 HOH HOH . L 4 HOH A 29 239 239 HOH HOH . L 4 HOH A 30 244 244 HOH HOH . M 4 HOH B 1 104 104 HOH HOH . M 4 HOH B 2 107 107 HOH HOH . M 4 HOH B 3 111 111 HOH HOH . M 4 HOH B 4 112 112 HOH HOH . M 4 HOH B 5 114 114 HOH HOH . M 4 HOH B 6 116 116 HOH HOH . M 4 HOH B 7 117 117 HOH HOH . M 4 HOH B 8 122 122 HOH HOH . M 4 HOH B 9 124 124 HOH HOH . M 4 HOH B 10 128 128 HOH HOH . M 4 HOH B 11 129 129 HOH HOH . M 4 HOH B 12 130 130 HOH HOH . M 4 HOH B 13 136 136 HOH HOH . M 4 HOH B 14 137 137 HOH HOH . M 4 HOH B 15 138 138 HOH HOH . M 4 HOH B 16 140 140 HOH HOH . M 4 HOH B 17 145 145 HOH HOH . M 4 HOH B 18 146 146 HOH HOH . M 4 HOH B 19 149 149 HOH HOH . M 4 HOH B 20 151 151 HOH HOH . M 4 HOH B 21 152 152 HOH HOH . M 4 HOH B 22 153 153 HOH HOH . M 4 HOH B 23 164 164 HOH HOH . M 4 HOH B 24 165 165 HOH HOH . M 4 HOH B 25 166 166 HOH HOH . M 4 HOH B 26 167 167 HOH HOH . M 4 HOH B 27 171 171 HOH HOH . M 4 HOH B 28 175 175 HOH HOH . M 4 HOH B 29 178 178 HOH HOH . M 4 HOH B 30 206 206 HOH HOH . M 4 HOH B 31 208 208 HOH HOH . M 4 HOH B 32 209 209 HOH HOH . M 4 HOH B 33 210 210 HOH HOH . M 4 HOH B 34 217 217 HOH HOH . M 4 HOH B 35 219 219 HOH HOH . M 4 HOH B 36 221 221 HOH HOH . M 4 HOH B 37 227 227 HOH HOH . M 4 HOH B 38 228 228 HOH HOH . M 4 HOH B 39 232 232 HOH HOH . M 4 HOH B 40 233 233 HOH HOH . M 4 HOH B 41 241 241 HOH HOH . M 4 HOH B 42 243 243 HOH HOH . N 4 HOH C 1 101 101 HOH HOH . N 4 HOH C 2 113 113 HOH HOH . N 4 HOH C 3 115 115 HOH HOH . N 4 HOH C 4 121 121 HOH HOH . N 4 HOH C 5 123 123 HOH HOH . N 4 HOH C 6 131 131 HOH HOH . N 4 HOH C 7 132 132 HOH HOH . N 4 HOH C 8 142 142 HOH HOH . N 4 HOH C 9 143 143 HOH HOH . N 4 HOH C 10 144 144 HOH HOH . N 4 HOH C 11 150 150 HOH HOH . N 4 HOH C 12 158 158 HOH HOH . N 4 HOH C 13 168 168 HOH HOH . N 4 HOH C 14 174 174 HOH HOH . N 4 HOH C 15 184 184 HOH HOH . N 4 HOH C 16 185 185 HOH HOH . N 4 HOH C 17 187 187 HOH HOH . N 4 HOH C 18 192 192 HOH HOH . N 4 HOH C 19 199 199 HOH HOH . N 4 HOH C 20 201 201 HOH HOH . N 4 HOH C 21 215 215 HOH HOH . N 4 HOH C 22 218 218 HOH HOH . N 4 HOH C 23 220 220 HOH HOH . N 4 HOH C 24 224 224 HOH HOH . N 4 HOH C 25 229 229 HOH HOH . N 4 HOH C 26 234 234 HOH HOH . N 4 HOH C 27 236 236 HOH HOH . N 4 HOH C 28 238 238 HOH HOH . N 4 HOH C 29 240 240 HOH HOH . N 4 HOH C 30 242 242 HOH HOH . O 4 HOH D 1 109 109 HOH HOH . O 4 HOH D 2 110 110 HOH HOH . O 4 HOH D 3 125 125 HOH HOH . O 4 HOH D 4 133 133 HOH HOH . O 4 HOH D 5 139 139 HOH HOH . O 4 HOH D 6 141 141 HOH HOH . O 4 HOH D 7 156 156 HOH HOH . O 4 HOH D 8 157 157 HOH HOH . O 4 HOH D 9 160 160 HOH HOH . O 4 HOH D 10 162 162 HOH HOH . O 4 HOH D 11 173 173 HOH HOH . O 4 HOH D 12 179 179 HOH HOH . O 4 HOH D 13 180 180 HOH HOH . O 4 HOH D 14 181 181 HOH HOH . O 4 HOH D 15 202 202 HOH HOH . O 4 HOH D 16 204 204 HOH HOH . O 4 HOH D 17 216 216 HOH HOH . O 4 HOH D 18 231 231 HOH HOH . O 4 HOH D 19 235 235 HOH HOH . O 4 HOH D 20 237 237 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 3 2.983 23.454 20.504 1 20.39 ? S SO4 401 B 1 HETATM 2 O O1 SO4 . . . G 3 2.833 23.209 21.944 1 22.55 ? O1 SO4 401 B 1 HETATM 3 O O2 SO4 . . . G 3 3.244 24.873 20.243 1 20.22 ? O2 SO4 401 B 1 HETATM 4 O O3 SO4 . . . G 3 4.068 22.633 20.028 1 20.79 ? O3 SO4 401 B 1 HETATM 5 O O4 SO4 . . . G 3 1.697 23.23 19.845 1 22.77 ? O4 SO4 401 B 1 # _model_server_stats.io_time_ms 89 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #