data_1ZOT # _model_server_result.job_id pWjAHvHrFeGSu32I0tefVg _model_server_result.datetime_utc '2025-03-01 03:26:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zot # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":801}' # _entry.id 1ZOT # _exptl.entry_id 1ZOT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZOT _cell.length_a 79.674 _cell.length_b 79.674 _cell.length_c 139.339 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZOT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 182 A ASP 188 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc2 A OD2 ASP 182 A ASP 188 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc3 A OD2 ASP 182 A ASP 188 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc4 A O ILE 183 A ILE 189 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc5 A OD1 ASP 184 A ASP 190 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc6 A N GLN 291 A GLN 297 1_555 D MG MG . A MG 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc7 A ND1 HIS 292 A HIS 298 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? metalc ? metalc8 F O1A EMA . A EMA 900 1_555 C MG MG . A MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 ? metalc ? metalc9 F O2A EMA . A EMA 900 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc10 F O5' EMA . A EMA 900 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.94 ? metalc ? metalc11 F O3A EMA . A EMA 900 1_555 E MG MG . A MG 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc12 D MG MG . A MG 902 1_555 I O HOH . A HOH 967 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc13 B OD2 ASP 15 B ASP 93 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.084 ? metalc ? metalc14 B OD1 ASP 17 B ASP 95 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc15 B O ASN 19 B ASN 97 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.308 ? metalc ? metalc16 B OD1 ASN 19 B ASN 97 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc17 B O TYR 21 B TYR 99 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc18 B OE2 GLU 26 B GLU 104 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc19 B OE1 GLU 26 B GLU 104 1_555 H CA CA . B CA 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc20 B OD2 ASP 51 B ASP 129 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc21 B OD2 ASP 53 B ASP 131 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.014 ? metalc ? metalc22 B OD1 ASP 53 B ASP 131 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc23 B OD1 ASP 55 B ASP 133 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc24 B O GLN 57 B GLN 135 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc25 B OE1 GLU 62 B GLU 140 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc26 B OE2 GLU 62 B GLU 140 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc27 J O HOH . B HOH 188 1_555 G CA CA . B CA 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZOT _atom_sites.fract_transf_matrix[1][1] 0.012551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 901 907 MG MG2 . D 3 MG A 1 902 908 MG MG2 . E 3 MG A 1 903 309 MG MG2 . F 4 EMA A 1 900 100 EMA PMP . G 5 CA B 1 800 800 CA CA2 . H 5 CA B 1 801 801 CA CA2 . I 6 HOH A 1 904 148 HOH TIP . I 6 HOH A 2 905 150 HOH TIP . I 6 HOH A 3 906 151 HOH TIP . I 6 HOH A 4 907 152 HOH TIP . I 6 HOH A 5 908 153 HOH TIP . I 6 HOH A 6 909 154 HOH TIP . I 6 HOH A 7 910 155 HOH TIP . I 6 HOH A 8 911 156 HOH TIP . I 6 HOH A 9 912 157 HOH TIP . I 6 HOH A 10 913 158 HOH TIP . I 6 HOH A 11 914 159 HOH TIP . I 6 HOH A 12 915 160 HOH TIP . I 6 HOH A 13 916 161 HOH TIP . I 6 HOH A 14 917 163 HOH TIP . I 6 HOH A 15 918 164 HOH TIP . I 6 HOH A 16 919 166 HOH TIP . I 6 HOH A 17 920 170 HOH TIP . I 6 HOH A 18 921 171 HOH TIP . I 6 HOH A 19 922 172 HOH TIP . I 6 HOH A 20 923 173 HOH TIP . I 6 HOH A 21 924 174 HOH TIP . I 6 HOH A 22 925 175 HOH TIP . I 6 HOH A 23 926 178 HOH TIP . I 6 HOH A 24 927 179 HOH TIP . I 6 HOH A 25 928 180 HOH TIP . I 6 HOH A 26 929 181 HOH TIP . I 6 HOH A 27 930 182 HOH TIP . I 6 HOH A 28 931 183 HOH TIP . I 6 HOH A 29 932 184 HOH TIP . I 6 HOH A 30 933 185 HOH TIP . I 6 HOH A 31 934 186 HOH TIP . I 6 HOH A 32 935 187 HOH TIP . I 6 HOH A 33 936 190 HOH TIP . I 6 HOH A 34 937 191 HOH TIP . I 6 HOH A 35 938 192 HOH TIP . I 6 HOH A 36 939 193 HOH TIP . I 6 HOH A 37 940 194 HOH TIP . I 6 HOH A 38 941 195 HOH TIP . I 6 HOH A 39 942 196 HOH TIP . I 6 HOH A 40 943 197 HOH TIP . I 6 HOH A 41 944 198 HOH TIP . I 6 HOH A 42 945 199 HOH TIP . I 6 HOH A 43 946 200 HOH TIP . I 6 HOH A 44 947 201 HOH TIP . I 6 HOH A 45 948 202 HOH TIP . I 6 HOH A 46 949 204 HOH TIP . I 6 HOH A 47 950 205 HOH TIP . I 6 HOH A 48 951 206 HOH TIP . I 6 HOH A 49 952 207 HOH TIP . I 6 HOH A 50 953 208 HOH TIP . I 6 HOH A 51 954 209 HOH TIP . I 6 HOH A 52 955 210 HOH TIP . I 6 HOH A 53 956 211 HOH TIP . I 6 HOH A 54 957 212 HOH TIP . I 6 HOH A 55 958 213 HOH TIP . I 6 HOH A 56 959 214 HOH TIP . I 6 HOH A 57 960 215 HOH TIP . I 6 HOH A 58 961 216 HOH TIP . I 6 HOH A 59 962 219 HOH TIP . I 6 HOH A 60 963 221 HOH TIP . I 6 HOH A 61 964 224 HOH TIP . I 6 HOH A 62 965 225 HOH TIP . I 6 HOH A 63 966 226 HOH TIP . I 6 HOH A 64 967 227 HOH TIP . I 6 HOH A 65 968 228 HOH TIP . I 6 HOH A 66 969 230 HOH TIP . I 6 HOH A 67 970 231 HOH TIP . I 6 HOH A 68 971 232 HOH TIP . I 6 HOH A 69 972 233 HOH TIP . I 6 HOH A 70 973 234 HOH TIP . I 6 HOH A 71 974 235 HOH TIP . I 6 HOH A 72 975 236 HOH TIP . I 6 HOH A 73 976 238 HOH TIP . I 6 HOH A 74 977 239 HOH TIP . I 6 HOH A 75 978 240 HOH TIP . I 6 HOH A 76 979 241 HOH TIP . I 6 HOH A 77 980 242 HOH TIP . I 6 HOH A 78 981 243 HOH TIP . I 6 HOH A 79 982 244 HOH TIP . I 6 HOH A 80 983 245 HOH TIP . I 6 HOH A 81 984 246 HOH TIP . I 6 HOH A 82 985 248 HOH TIP . I 6 HOH A 83 986 249 HOH TIP . I 6 HOH A 84 987 250 HOH TIP . I 6 HOH A 85 988 252 HOH TIP . I 6 HOH A 86 989 253 HOH TIP . I 6 HOH A 87 990 254 HOH TIP . I 6 HOH A 88 991 255 HOH TIP . I 6 HOH A 89 992 256 HOH TIP . I 6 HOH A 90 993 257 HOH TIP . I 6 HOH A 91 994 258 HOH TIP . I 6 HOH A 92 995 259 HOH TIP . I 6 HOH A 93 996 260 HOH TIP . I 6 HOH A 94 997 261 HOH TIP . I 6 HOH A 95 998 262 HOH TIP . I 6 HOH A 96 999 263 HOH TIP . I 6 HOH A 97 1000 265 HOH TIP . I 6 HOH A 98 1001 267 HOH TIP . I 6 HOH A 99 1002 268 HOH TIP . I 6 HOH A 100 1003 269 HOH TIP . I 6 HOH A 101 1004 270 HOH TIP . I 6 HOH A 102 1005 271 HOH TIP . I 6 HOH A 103 1006 272 HOH TIP . I 6 HOH A 104 1007 273 HOH TIP . I 6 HOH A 105 1008 274 HOH TIP . I 6 HOH A 106 1009 275 HOH TIP . I 6 HOH A 107 1010 277 HOH TIP . I 6 HOH A 108 1011 278 HOH TIP . I 6 HOH A 109 1012 279 HOH TIP . I 6 HOH A 110 1013 282 HOH TIP . I 6 HOH A 111 1014 283 HOH TIP . I 6 HOH A 112 1015 285 HOH TIP . I 6 HOH A 113 1016 287 HOH TIP . I 6 HOH A 114 1017 289 HOH TIP . I 6 HOH A 115 1018 292 HOH TIP . I 6 HOH A 116 1019 293 HOH TIP . I 6 HOH A 117 1020 294 HOH TIP . I 6 HOH A 118 1021 296 HOH TIP . I 6 HOH A 119 1022 297 HOH TIP . I 6 HOH A 120 1023 298 HOH TIP . I 6 HOH A 121 1024 299 HOH TIP . I 6 HOH A 122 1025 300 HOH TIP . I 6 HOH A 123 1026 301 HOH TIP . I 6 HOH A 124 1027 303 HOH TIP . I 6 HOH A 125 1028 304 HOH TIP . I 6 HOH A 126 1029 306 HOH TIP . I 6 HOH A 127 1030 307 HOH TIP . I 6 HOH A 128 1031 308 HOH TIP . J 6 HOH B 1 149 149 HOH TIP . J 6 HOH B 2 162 162 HOH TIP . J 6 HOH B 3 165 165 HOH TIP . J 6 HOH B 4 167 167 HOH TIP . J 6 HOH B 5 168 168 HOH TIP . J 6 HOH B 6 169 169 HOH TIP . J 6 HOH B 7 176 176 HOH TIP . J 6 HOH B 8 177 177 HOH TIP . J 6 HOH B 9 188 188 HOH TIP . J 6 HOH B 10 189 189 HOH TIP . J 6 HOH B 11 203 203 HOH TIP . J 6 HOH B 12 217 217 HOH TIP . J 6 HOH B 13 218 218 HOH TIP . J 6 HOH B 14 220 220 HOH TIP . J 6 HOH B 15 222 222 HOH TIP . J 6 HOH B 16 223 223 HOH TIP . J 6 HOH B 17 229 229 HOH TIP . J 6 HOH B 18 237 237 HOH TIP . J 6 HOH B 19 247 247 HOH TIP . J 6 HOH B 20 251 251 HOH TIP . J 6 HOH B 21 264 264 HOH TIP . J 6 HOH B 22 266 266 HOH TIP . J 6 HOH B 23 276 276 HOH TIP . J 6 HOH B 24 280 280 HOH TIP . J 6 HOH B 25 281 281 HOH TIP . J 6 HOH B 26 284 284 HOH TIP . J 6 HOH B 27 286 286 HOH TIP . J 6 HOH B 28 288 288 HOH TIP . J 6 HOH B 29 290 290 HOH TIP . J 6 HOH B 30 291 291 HOH TIP . J 6 HOH B 31 295 295 HOH TIP . J 6 HOH B 32 302 302 HOH TIP . J 6 HOH B 33 305 305 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x 18.594 _atom_site.Cartn_y 17.981 _atom_site.Cartn_z 58.036 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 34.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 801 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #