data_1ZSZ # _model_server_result.job_id 42sGms2JKiN6kVB9gmx_XQ _model_server_result.datetime_utc '2025-03-06 08:32:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zsz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1003}' # _entry.id 1ZSZ # _exptl.entry_id 1ZSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.87 _cell.angle_gamma 90 _cell.entry_id 1ZSZ _cell.length_a 120.004 _cell.length_b 61.036 _cell.length_c 62.385 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA hexameric 6 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1,2 B,C,E,F,H,I 2 1 A,D,G 3 3,4 B,C,E,F,H,I 3 1,5 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 3_556 x+1/2,y+1/2,z+1 1 0 0 0 1 0 0 0 1 37.777418 30.518 58.291991 4 'crystal symmetry operation' 4_556 -x+1/2,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 37.777418 30.518 58.291991 5 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 75.554837 0 116.583982 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ALA 56 A ALA 56 1_555 D MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc2 A O THR 59 A THR 59 1_555 D MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc3 A OE1 GLN 70 A GLN 70 4_556 E MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc4 A OE1 GLU 81 A GLU 81 4_556 E MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc5 D MG MG . A MG 1001 1_555 C OE1 GLN 70 C GLN 70 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc6 D MG MG . A MG 1001 1_555 C OE1 GLU 81 C GLU 81 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc7 B O ALA 56 B ALA 56 1_555 E MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc8 B O THR 59 B THR 59 1_555 E MG MG . B MG 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc9 C O ALA 56 C ALA 56 1_555 F MG MG . C MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc10 C O THR 59 C THR 59 1_555 F MG MG . C MG 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZSZ _atom_sites.fract_transf_matrix[1][1] 0.008333 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003177 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017155 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG A 1 1001 1 MG MG . E 4 MG B 1 1002 2 MG MG . F 4 MG C 1 1003 3 MG MG . G 5 HOH A 1 1002 1 HOH HOH . G 5 HOH A 2 1003 2 HOH HOH . G 5 HOH A 3 1004 5 HOH HOH . G 5 HOH A 4 1005 6 HOH HOH . G 5 HOH A 5 1006 9 HOH HOH . G 5 HOH A 6 1007 10 HOH HOH . G 5 HOH A 7 1008 16 HOH HOH . G 5 HOH A 8 1009 17 HOH HOH . G 5 HOH A 9 1010 20 HOH HOH . G 5 HOH A 10 1011 21 HOH HOH . G 5 HOH A 11 1012 25 HOH HOH . G 5 HOH A 12 1013 27 HOH HOH . G 5 HOH A 13 1014 28 HOH HOH . G 5 HOH A 14 1015 29 HOH HOH . G 5 HOH A 15 1016 40 HOH HOH . G 5 HOH A 16 1017 41 HOH HOH . G 5 HOH A 17 1018 42 HOH HOH . G 5 HOH A 18 1019 45 HOH HOH . G 5 HOH A 19 1020 46 HOH HOH . G 5 HOH A 20 1021 53 HOH HOH . G 5 HOH A 21 1022 57 HOH HOH . G 5 HOH A 22 1023 58 HOH HOH . G 5 HOH A 23 1024 61 HOH HOH . G 5 HOH A 24 1025 64 HOH HOH . G 5 HOH A 25 1026 66 HOH HOH . G 5 HOH A 26 1027 67 HOH HOH . G 5 HOH A 27 1028 68 HOH HOH . G 5 HOH A 28 1029 71 HOH HOH . G 5 HOH A 29 1030 72 HOH HOH . G 5 HOH A 30 1031 76 HOH HOH . G 5 HOH A 31 1032 77 HOH HOH . G 5 HOH A 32 1033 79 HOH HOH . G 5 HOH A 33 1034 80 HOH HOH . G 5 HOH A 34 1035 83 HOH HOH . G 5 HOH A 35 1036 88 HOH HOH . G 5 HOH A 36 1037 90 HOH HOH . G 5 HOH A 37 1038 92 HOH HOH . G 5 HOH A 38 1039 93 HOH HOH . G 5 HOH A 39 1040 95 HOH HOH . H 5 HOH B 1 1003 3 HOH HOH . H 5 HOH B 2 1004 4 HOH HOH . H 5 HOH B 3 1005 7 HOH HOH . H 5 HOH B 4 1006 8 HOH HOH . H 5 HOH B 5 1007 11 HOH HOH . H 5 HOH B 6 1008 13 HOH HOH . H 5 HOH B 7 1009 15 HOH HOH . H 5 HOH B 8 1010 18 HOH HOH . H 5 HOH B 9 1011 19 HOH HOH . H 5 HOH B 10 1012 24 HOH HOH . H 5 HOH B 11 1013 35 HOH HOH . H 5 HOH B 12 1014 44 HOH HOH . H 5 HOH B 13 1015 47 HOH HOH . H 5 HOH B 14 1016 48 HOH HOH . H 5 HOH B 15 1017 49 HOH HOH . H 5 HOH B 16 1018 51 HOH HOH . H 5 HOH B 17 1019 52 HOH HOH . H 5 HOH B 18 1020 54 HOH HOH . H 5 HOH B 19 1021 55 HOH HOH . H 5 HOH B 20 1022 60 HOH HOH . H 5 HOH B 21 1023 62 HOH HOH . H 5 HOH B 22 1024 65 HOH HOH . H 5 HOH B 23 1025 69 HOH HOH . H 5 HOH B 24 1026 75 HOH HOH . H 5 HOH B 25 1027 78 HOH HOH . H 5 HOH B 26 1028 84 HOH HOH . H 5 HOH B 27 1029 94 HOH HOH . H 5 HOH B 28 1030 96 HOH HOH . I 5 HOH C 1 1004 12 HOH HOH . I 5 HOH C 2 1005 14 HOH HOH . I 5 HOH C 3 1006 22 HOH HOH . I 5 HOH C 4 1007 23 HOH HOH . I 5 HOH C 5 1008 26 HOH HOH . I 5 HOH C 6 1009 30 HOH HOH . I 5 HOH C 7 1010 31 HOH HOH . I 5 HOH C 8 1011 32 HOH HOH . I 5 HOH C 9 1012 33 HOH HOH . I 5 HOH C 10 1013 34 HOH HOH . I 5 HOH C 11 1014 36 HOH HOH . I 5 HOH C 12 1015 37 HOH HOH . I 5 HOH C 13 1016 38 HOH HOH . I 5 HOH C 14 1017 39 HOH HOH . I 5 HOH C 15 1018 43 HOH HOH . I 5 HOH C 16 1019 50 HOH HOH . I 5 HOH C 17 1020 56 HOH HOH . I 5 HOH C 18 1021 63 HOH HOH . I 5 HOH C 19 1022 70 HOH HOH . I 5 HOH C 20 1023 73 HOH HOH . I 5 HOH C 21 1024 74 HOH HOH . I 5 HOH C 22 1025 81 HOH HOH . I 5 HOH C 23 1026 82 HOH HOH . I 5 HOH C 24 1027 85 HOH HOH . I 5 HOH C 25 1028 87 HOH HOH . I 5 HOH C 26 1029 89 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 4 _atom_site.Cartn_x 40.604 _atom_site.Cartn_y 57.072 _atom_site.Cartn_z 66.668 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 40.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1003 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #