data_1ZTL # _model_server_result.job_id KFN-ptV3fk-QGTzuvox7dg _model_server_result.datetime_utc '2024-11-22 08:32:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ztl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":248}' # _entry.id 1ZTL # _exptl.entry_id 1ZTL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 623.728 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[4-GUANIDINO-1-(THIAZOLE-2-CARBONYL)-BUTYL]-2-{6-OXO-5-[(QUINOLIN-8-YLMETHYL)-AMINO]-2-M-TOLYL-6H-PYRIMIDIN-1-YL}-ACETAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZTL _cell.length_a 121.965 _cell.length_b 121.965 _cell.length_c 121.965 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZTL _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 40 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 127 A CYS 136 1_555 A SG CYS 194 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 173 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 184 A CYS 191 1_555 A SG CYS 212 A CYS 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A OG SER 188 A SER 195 1_555 D CX 737 . A 737 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? # _chem_comp.formula 'C32 H33 N9 O3 S' _chem_comp.formula_weight 623.728 _chem_comp.id 737 _chem_comp.mon_nstd_flag . _chem_comp.name N-[4-GUANIDINO-1-(THIAZOLE-2-CARBONYL)-BUTYL]-2-{6-OXO-5-[(QUINOLIN-8-YLMETHYL)-AMINO]-2-M-TOLYL-6H-PYRIMIDIN-1-YL}-ACETAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CX CY 737 sing 1 n n CX CZ 737 sing 2 n n CX OX 737 doub 3 n n CY N05 737 sing 4 n n CY C06 737 sing 5 n n CY HY 737 sing 6 n n CZ N31 737 doub 7 n y CZ S34 737 sing 8 n y N05 C13 737 sing 9 n n N05 H05 737 sing 10 n n C06 C07 737 sing 11 n n C06 H061 737 sing 12 n n C06 H062 737 sing 13 n n C07 C08 737 sing 14 n n C07 H071 737 sing 15 n n C07 H072 737 sing 16 n n C08 N09 737 sing 17 n n C08 H081 737 sing 18 n n C08 H082 737 sing 19 n n N09 C10 737 sing 20 n n N09 H09 737 sing 21 n n C10 N11 737 sing 22 n n C10 N12 737 doub 23 n n N11 H111 737 sing 24 n n N11 H112 737 sing 25 n n N12 H12 737 sing 26 n n C13 O14 737 doub 27 n n C13 C15 737 sing 28 n n C15 N16 737 sing 29 n n C15 H151 737 sing 30 n n C15 H152 737 sing 31 n n N16 C17 737 sing 32 n n N16 C21 737 sing 33 n n C17 N18 737 doub 34 n n C17 C23 737 sing 35 n n N18 C19 737 sing 36 n n C19 C20 737 doub 37 n n C19 H19 737 sing 38 n n C20 C21 737 sing 39 n n C20 N22 737 sing 40 n n C21 O30 737 doub 41 n n N22 C35 737 sing 42 n n N22 H22 737 sing 43 n n C23 C24 737 doub 44 n y C23 C28 737 sing 45 n y C24 C25 737 sing 46 n y C24 H24 737 sing 47 n n C25 C26 737 doub 48 n y C25 H25 737 sing 49 n n C26 C27 737 sing 50 n y C26 H26 737 sing 51 n n C27 C28 737 doub 52 n y C27 C29 737 sing 53 n n C28 H28 737 sing 54 n n C29 H291 737 sing 55 n n C29 H292 737 sing 56 n n C29 H293 737 sing 57 n n N31 C32 737 sing 58 n y C32 C33 737 doub 59 n y C32 H32 737 sing 60 n n C33 S34 737 sing 61 n y C33 H33 737 sing 62 n n C35 C36 737 sing 63 n n C35 H351 737 sing 64 n n C35 H352 737 sing 65 n n C36 C37 737 doub 66 n y C36 C45 737 sing 67 n y C37 C38 737 sing 68 n y C37 H37 737 sing 69 n n C38 C39 737 doub 70 n y C38 H38 737 sing 71 n n C39 C40 737 sing 72 n y C39 H39 737 sing 73 n n C40 C41 737 doub 74 n y C40 C45 737 sing 75 n y C41 C42 737 sing 76 n y C41 H41 737 sing 77 n n C42 C43 737 doub 78 n y C42 H42 737 sing 79 n n C43 N44 737 sing 80 n y C43 H43 737 sing 81 n n N44 C45 737 doub 82 n y # _atom_sites.entry_id 1ZTL _atom_sites.fract_transf_matrix[1][1] 0.008199 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008199 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 246 2 SO4 SO4 . C 2 SO4 A 1 247 3 SO4 SO4 . D 3 737 A 1 248 1 737 737 . E 4 HOH A 1 249 1 HOH HOH . E 4 HOH A 2 250 2 HOH HOH . E 4 HOH A 3 251 3 HOH HOH . E 4 HOH A 4 252 4 HOH HOH . E 4 HOH A 5 253 5 HOH HOH . E 4 HOH A 6 254 6 HOH HOH . E 4 HOH A 7 255 7 HOH HOH . E 4 HOH A 8 256 8 HOH HOH . E 4 HOH A 9 257 9 HOH HOH . E 4 HOH A 10 258 10 HOH HOH . E 4 HOH A 11 259 11 HOH HOH . E 4 HOH A 12 260 12 HOH HOH . E 4 HOH A 13 261 13 HOH HOH . E 4 HOH A 14 262 14 HOH HOH . E 4 HOH A 15 263 15 HOH HOH . E 4 HOH A 16 264 16 HOH HOH . E 4 HOH A 17 265 17 HOH HOH . E 4 HOH A 18 266 18 HOH HOH . E 4 HOH A 19 267 19 HOH HOH . E 4 HOH A 20 268 20 HOH HOH . E 4 HOH A 21 269 21 HOH HOH . E 4 HOH A 22 270 22 HOH HOH . E 4 HOH A 23 271 23 HOH HOH . E 4 HOH A 24 272 24 HOH HOH . E 4 HOH A 25 273 25 HOH HOH . E 4 HOH A 26 274 26 HOH HOH . E 4 HOH A 27 275 27 HOH HOH . E 4 HOH A 28 276 28 HOH HOH . E 4 HOH A 29 277 29 HOH HOH . E 4 HOH A 30 278 30 HOH HOH . E 4 HOH A 31 279 31 HOH HOH . E 4 HOH A 32 280 32 HOH HOH . E 4 HOH A 33 281 33 HOH HOH . E 4 HOH A 34 282 34 HOH HOH . E 4 HOH A 35 283 35 HOH HOH . E 4 HOH A 36 284 36 HOH HOH . E 4 HOH A 37 285 37 HOH HOH . E 4 HOH A 38 286 38 HOH HOH . E 4 HOH A 39 287 39 HOH HOH . E 4 HOH A 40 288 40 HOH HOH . E 4 HOH A 41 289 41 HOH HOH . E 4 HOH A 42 290 42 HOH HOH . E 4 HOH A 43 291 43 HOH HOH . E 4 HOH A 44 292 44 HOH HOH . E 4 HOH A 45 293 45 HOH HOH . E 4 HOH A 46 294 46 HOH HOH . E 4 HOH A 47 295 47 HOH HOH . E 4 HOH A 48 296 48 HOH HOH . E 4 HOH A 49 297 49 HOH HOH . E 4 HOH A 50 298 50 HOH HOH . E 4 HOH A 51 299 51 HOH HOH . E 4 HOH A 52 300 52 HOH HOH . E 4 HOH A 53 301 53 HOH HOH . E 4 HOH A 54 302 54 HOH HOH . E 4 HOH A 55 303 55 HOH HOH . E 4 HOH A 56 304 56 HOH HOH . E 4 HOH A 57 305 57 HOH HOH . E 4 HOH A 58 306 58 HOH HOH . E 4 HOH A 59 307 59 HOH HOH . E 4 HOH A 60 308 60 HOH HOH . E 4 HOH A 61 309 61 HOH HOH . E 4 HOH A 62 310 62 HOH HOH . E 4 HOH A 63 311 63 HOH HOH . E 4 HOH A 64 312 64 HOH HOH . E 4 HOH A 65 313 65 HOH HOH . E 4 HOH A 66 314 66 HOH HOH . E 4 HOH A 67 315 67 HOH HOH . E 4 HOH A 68 316 68 HOH HOH . E 4 HOH A 69 317 69 HOH HOH . E 4 HOH A 70 318 70 HOH HOH . E 4 HOH A 71 319 71 HOH HOH . E 4 HOH A 72 320 72 HOH HOH . E 4 HOH A 73 321 73 HOH HOH . E 4 HOH A 74 322 74 HOH HOH . E 4 HOH A 75 323 75 HOH HOH . E 4 HOH A 76 324 76 HOH HOH . E 4 HOH A 77 325 77 HOH HOH . E 4 HOH A 78 326 78 HOH HOH . E 4 HOH A 79 327 79 HOH HOH . E 4 HOH A 80 328 80 HOH HOH . E 4 HOH A 81 329 81 HOH HOH . E 4 HOH A 82 330 82 HOH HOH . E 4 HOH A 83 331 83 HOH HOH . E 4 HOH A 84 332 84 HOH HOH . E 4 HOH A 85 333 85 HOH HOH . E 4 HOH A 86 334 86 HOH HOH . E 4 HOH A 87 335 87 HOH HOH . E 4 HOH A 88 336 88 HOH HOH . E 4 HOH A 89 337 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CX 737 . . . D 3 11.422 51.444 25.414 1 25.85 ? CX 737 248 A 1 HETATM 2 C CY 737 . . . D 3 11.927 51.554 23.961 1 25.28 ? CY 737 248 A 1 HETATM 3 C CZ 737 . . . D 3 11.645 52.709 26.275 1 27.66 ? CZ 737 248 A 1 HETATM 4 O OX 737 . . . D 3 10.028 51.219 25.436 1 25.19 ? OX 737 248 A 1 HETATM 5 N N05 737 . . . D 3 13.361 51.674 24.022 1 28.56 ? N05 737 248 A 1 HETATM 6 C C06 737 . . . D 3 11.632 50.275 23.177 1 24.85 ? C06 737 248 A 1 HETATM 7 C C07 737 . . . D 3 12.15 50.36 21.744 1 23.91 ? C07 737 248 A 1 HETATM 8 C C08 737 . . . D 3 11.871 49.089 20.971 1 24.69 ? C08 737 248 A 1 HETATM 9 N N09 737 . . . D 3 11.796 49.442 19.566 1 26.79 ? N09 737 248 A 1 HETATM 10 C C10 737 . . . D 3 11.535 48.531 18.514 1 27.36 ? C10 737 248 A 1 HETATM 11 N N11 737 . . . D 3 11.177 49.053 17.256 1 28.5 ? N11 737 248 A 1 HETATM 12 N N12 737 . . . D 3 11.602 47.261 18.661 1 27.41 ? N12 737 248 A 1 HETATM 13 C C13 737 . . . D 3 14.114 52.729 23.969 1 31.83 ? C13 737 248 A 1 HETATM 14 O O14 737 . . . D 3 13.695 53.877 23.851 1 29.92 ? O14 737 248 A 1 HETATM 15 C C15 737 . . . D 3 15.594 52.408 24.072 1 34.8 ? C15 737 248 A 1 HETATM 16 N N16 737 . . . D 3 16.269 53.259 23.1 1 39.4 ? N16 737 248 A 1 HETATM 17 C C17 737 . . . D 3 16.951 54.41 23.449 1 41.23 ? C17 737 248 A 1 HETATM 18 N N18 737 . . . D 3 17.58 55.209 22.547 1 42.58 ? N18 737 248 A 1 HETATM 19 C C19 737 . . . D 3 17.543 54.856 21.227 1 42.29 ? C19 737 248 A 1 HETATM 20 C C20 737 . . . D 3 16.875 53.7 20.758 1 41.86 ? C20 737 248 A 1 HETATM 21 C C21 737 . . . D 3 16.243 52.92 21.765 1 40.44 ? C21 737 248 A 1 HETATM 22 N N22 737 . . . D 3 16.824 53.315 19.378 1 42.11 ? N22 737 248 A 1 HETATM 23 C C23 737 . . . D 3 17.021 54.848 24.885 1 41.21 ? C23 737 248 A 1 HETATM 24 C C24 737 . . . D 3 18.139 54.476 25.679 1 41.6 ? C24 737 248 A 1 HETATM 25 C C25 737 . . . D 3 18.213 54.874 27.045 1 42.78 ? C25 737 248 A 1 HETATM 26 C C26 737 . . . D 3 17.173 55.651 27.639 1 42.65 ? C26 737 248 A 1 HETATM 27 C C27 737 . . . D 3 16.039 56.043 26.868 1 43.79 ? C27 737 248 A 1 HETATM 28 C C28 737 . . . D 3 15.969 55.636 25.489 1 42.5 ? C28 737 248 A 1 HETATM 29 C C29 737 . . . D 3 14.932 56.875 27.497 1 43.92 ? C29 737 248 A 1 HETATM 30 O O30 737 . . . D 3 15.644 51.9 21.385 1 40.11 ? O30 737 248 A 1 HETATM 31 N N31 737 . . . D 3 12.813 53.02 26.681 1 29.17 ? N31 737 248 A 1 HETATM 32 C C32 737 . . . D 3 12.756 54.18 27.432 1 28.82 ? C32 737 248 A 1 HETATM 33 C C33 737 . . . D 3 11.483 54.693 27.548 1 29.75 ? C33 737 248 A 1 HETATM 34 S S34 737 . . . D 3 10.348 53.746 26.729 1 33.66 ? S34 737 248 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #