data_1ZTU # _model_server_result.job_id xMeFf23jkdZ30ogJixqaTw _model_server_result.datetime_utc '2024-11-23 21:49:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ztu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":328}' # _entry.id 1ZTU # _exptl.entry_id 1ZTU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 582.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BILIVERDINE IX ALPHA' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZTU _cell.length_a 64.876 _cell.length_b 133.666 _cell.length_c 49.938 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZTU _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 38 A CYS 24 1_555 B CBC BLA . A BLA 328 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? covale ? covale2 A C ALA 157 A ALA 143 1_555 A N MSE 158 A MSE 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C MSE 158 A MSE 144 1_555 A N PHE 159 A PHE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C VAL 187 A VAL 173 1_555 A N MSE 188 A MSE 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C MSE 188 A MSE 174 1_555 A N LEU 189 A LEU 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C PRO 272 A PRO 258 1_555 A N MSE 273 A MSE 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale7 A C MSE 273 A MSE 259 1_555 A N HIS 274 A HIS 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 A C HIS 274 A HIS 260 1_555 A N MSE 275 A MSE 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale9 A C MSE 275 A MSE 261 1_555 A N GLN 276 A GLN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale10 A C ASN 280 A ASN 266 1_555 A N MSE 281 A MSE 267 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C MSE 281 A MSE 267 1_555 A N GLY 282 A GLY 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C33 H34 N4 O6' _chem_comp.formula_weight 582.646 _chem_comp.id BLA _chem_comp.mon_nstd_flag . _chem_comp.name 'BILIVERDINE IX ALPHA' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A BLA sing 70 n n CHA C4D BLA doub 71 z n CHA HHA BLA sing 72 n n NA C1A BLA sing 73 n y NA C4A BLA sing 74 n y NA HA BLA sing 75 n n C1A C2A BLA doub 76 n y C2A C3A BLA sing 77 n y C2A CAA BLA sing 78 n n C3A C4A BLA doub 79 n y C3A CMA BLA sing 80 n n C4A CHB BLA sing 81 n n CMA HMA1 BLA sing 82 n n CMA HMA2 BLA sing 83 n n CMA HMA3 BLA sing 84 n n CAA CBA BLA sing 85 n n CAA HAA1 BLA sing 86 n n CAA HAA2 BLA sing 87 n n CBA CGA BLA sing 88 n n CBA HBA1 BLA sing 89 n n CBA HBA2 BLA sing 90 n n CGA O1A BLA doub 91 n n CGA O2A BLA sing 92 n n O2A H2A BLA sing 93 n n CHB C1B BLA doub 94 z n CHB HHB BLA sing 95 n n NB C1B BLA sing 96 n n NB C4B BLA sing 97 n n NB HB BLA sing 98 n n C1B C2B BLA sing 99 n n C2B C3B BLA doub 100 n n C2B CMB BLA sing 101 n n C3B C4B BLA sing 102 n n C3B CAB BLA sing 103 n n C4B OB BLA doub 104 n n CMB HMB1 BLA sing 105 n n CMB HMB2 BLA sing 106 n n CMB HMB3 BLA sing 107 n n CAB CBB BLA doub 108 n n CAB HAB BLA sing 109 n n CBB HBB1 BLA sing 110 n n CBB HBB2 BLA sing 111 n n NC C1C BLA sing 112 n n NC C4C BLA sing 113 n n NC HC BLA sing 114 n n C1C C2C BLA sing 115 n n C1C OC BLA doub 116 n n C2C C3C BLA doub 117 n n C2C CMC BLA sing 118 n n C3C C4C BLA sing 119 n n C3C CAC BLA sing 120 n n C4C CHD BLA doub 121 z n CMC HMC1 BLA sing 122 n n CMC HMC2 BLA sing 123 n n CMC HMC3 BLA sing 124 n n CAC CBC BLA doub 125 n n CAC HAC BLA sing 126 n n CBC HBC1 BLA sing 127 n n CBC HBC2 BLA sing 128 n n CHD C1D BLA sing 129 n n CHD HHD BLA sing 130 n n ND C1D BLA doub 131 n n ND C4D BLA sing 132 n n C1D C2D BLA sing 133 n n C2D C3D BLA doub 134 n n C2D CMD BLA sing 135 n n C3D C4D BLA sing 136 n n C3D CAD BLA sing 137 n n CMD HMD1 BLA sing 138 n n CMD HMD2 BLA sing 139 n n CMD HMD3 BLA sing 140 n n CAD CBD BLA sing 141 n n CAD HAD1 BLA sing 142 n n CAD HAD2 BLA sing 143 n n CBD CGD BLA sing 144 n n CBD HBD1 BLA sing 145 n n CBD HBD2 BLA sing 146 n n CGD O1D BLA doub 147 n n CGD O2D BLA sing 148 n n O2D H2D BLA sing 149 n n # _atom_sites.entry_id 1ZTU _atom_sites.fract_transf_matrix[1][1] 0.015414 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BLA A 1 328 328 BLA BLA . C 3 HOH A 1 329 2 HOH HOH . C 3 HOH A 2 330 3 HOH HOH . C 3 HOH A 3 331 4 HOH HOH . C 3 HOH A 4 332 5 HOH HOH . C 3 HOH A 5 333 6 HOH HOH . C 3 HOH A 6 334 7 HOH HOH . C 3 HOH A 7 335 8 HOH HOH . C 3 HOH A 8 336 9 HOH HOH . C 3 HOH A 9 337 10 HOH HOH . C 3 HOH A 10 338 11 HOH HOH . C 3 HOH A 11 339 12 HOH HOH . C 3 HOH A 12 340 13 HOH HOH . C 3 HOH A 13 341 14 HOH HOH . C 3 HOH A 14 342 15 HOH HOH . C 3 HOH A 15 343 16 HOH HOH . C 3 HOH A 16 344 17 HOH HOH . C 3 HOH A 17 345 18 HOH HOH . C 3 HOH A 18 346 19 HOH HOH . C 3 HOH A 19 347 20 HOH HOH . C 3 HOH A 20 348 21 HOH HOH . C 3 HOH A 21 349 22 HOH HOH . C 3 HOH A 22 350 23 HOH HOH . C 3 HOH A 23 351 24 HOH HOH . C 3 HOH A 24 352 25 HOH HOH . C 3 HOH A 25 353 26 HOH HOH . C 3 HOH A 26 354 27 HOH HOH . C 3 HOH A 27 355 28 HOH HOH . C 3 HOH A 28 356 29 HOH HOH . C 3 HOH A 29 357 30 HOH HOH . C 3 HOH A 30 358 31 HOH HOH . C 3 HOH A 31 359 32 HOH HOH . C 3 HOH A 32 360 33 HOH HOH . C 3 HOH A 33 361 34 HOH HOH . C 3 HOH A 34 362 35 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA BLA . . . B 2 33.418 41.378 21.846 1 33.1 ? CHA BLA 328 A 1 HETATM 2 N NA BLA . . . B 2 35.727 41.358 20.947 1 32.91 ? NA BLA 328 A 1 HETATM 3 C C1A BLA . . . B 2 34.734 41.991 21.547 1 33.02 ? C1A BLA 328 A 1 HETATM 4 C C2A BLA . . . B 2 35.052 43.372 21.925 1 33.19 ? C2A BLA 328 A 1 HETATM 5 C C3A BLA . . . B 2 36.447 43.527 21.43 1 32.98 ? C3A BLA 328 A 1 HETATM 6 C C4A BLA . . . B 2 36.781 42.188 20.848 1 32.86 ? C4A BLA 328 A 1 HETATM 7 C CMA BLA . . . B 2 37.319 44.749 21.515 1 32.96 ? CMA BLA 328 A 1 HETATM 8 C CAA BLA . . . B 2 34.055 44.269 22.643 1 33.31 ? CAA BLA 328 A 1 HETATM 9 C CBA BLA . . . B 2 34.651 45.392 23.481 1 33.91 ? CBA BLA 328 A 1 HETATM 10 C CGA BLA . . . B 2 35.368 45.029 24.757 1 33.92 ? CGA BLA 328 A 1 HETATM 11 O O1A BLA . . . B 2 36.338 45.734 25.072 1 36.04 ? O1A BLA 328 A 1 HETATM 12 O O2A BLA . . . B 2 34.997 44.094 25.479 1 34.71 ? O2A BLA 328 A 1 HETATM 13 C CHB BLA . . . B 2 38.019 41.686 20.16 1 33.06 ? CHB BLA 328 A 1 HETATM 14 N NB BLA . . . B 2 39.85 42.863 21.533 1 32.71 ? NB BLA 328 A 1 HETATM 15 C C1B BLA . . . B 2 39.395 42.238 20.417 1 32.53 ? C1B BLA 328 A 1 HETATM 16 C C2B BLA . . . B 2 40.499 42.1 19.409 1 32.73 ? C2B BLA 328 A 1 HETATM 17 C C3B BLA . . . B 2 41.671 42.724 20.028 1 32.53 ? C3B BLA 328 A 1 HETATM 18 C C4B BLA . . . B 2 41.151 43.156 21.328 1 32.58 ? C4B BLA 328 A 1 HETATM 19 C CMB BLA . . . B 2 40.443 41.464 18.044 1 33.98 ? CMB BLA 328 A 1 HETATM 20 O OB BLA . . . B 2 41.871 43.759 22.189 1 33.69 ? OB BLA 328 A 1 HETATM 21 C CAB BLA . . . B 2 43.029 42.86 19.426 1 33.84 ? CAB BLA 328 A 1 HETATM 22 C CBB BLA . . . B 2 44.043 43.44 20.036 1 33.19 ? CBB BLA 328 A 1 HETATM 23 N NC BLA . . . B 2 35.025 36.768 19.625 1 33.12 ? NC BLA 328 A 1 HETATM 24 C C1C BLA . . . B 2 35.861 35.908 19.008 1 33.05 ? C1C BLA 328 A 1 HETATM 25 C C2C BLA . . . B 2 35.323 34.566 18.725 1 32.94 ? C2C BLA 328 A 1 HETATM 26 C C3C BLA . . . B 2 33.967 34.673 19.276 1 33.14 ? C3C BLA 328 A 1 HETATM 27 C C4C BLA . . . B 2 33.896 36.057 19.805 1 33 ? C4C BLA 328 A 1 HETATM 28 C CMC BLA . . . B 2 35.956 33.384 18.058 1 33.02 ? CMC BLA 328 A 1 HETATM 29 O OC BLA . . . B 2 37.053 36.212 18.656 1 33.16 ? OC BLA 328 A 1 HETATM 30 C CAC BLA . . . B 2 32.963 33.561 19.315 1 34.39 ? CAC BLA 328 A 1 HETATM 31 C CBC BLA . . . B 2 31.671 33.815 18.561 1 40.16 ? CBC BLA 328 A 1 HETATM 32 C CHD BLA . . . B 2 32.706 36.641 20.462 1 32.96 ? CHD BLA 328 A 1 HETATM 33 N ND BLA . . . B 2 33.418 38.995 21.015 1 33.06 ? ND BLA 328 A 1 HETATM 34 C C1D BLA . . . B 2 32.491 37.997 21.025 1 32.98 ? C1D BLA 328 A 1 HETATM 35 C C2D BLA . . . B 2 31.206 38.371 21.65 1 33.03 ? C2D BLA 328 A 1 HETATM 36 C C3D BLA . . . B 2 31.42 39.772 22.06 1 32.92 ? C3D BLA 328 A 1 HETATM 37 C C4D BLA . . . B 2 32.807 40.045 21.621 1 32.94 ? C4D BLA 328 A 1 HETATM 38 C CMD BLA . . . B 2 29.991 37.51 21.814 1 33.05 ? CMD BLA 328 A 1 HETATM 39 C CAD BLA . . . B 2 30.467 40.712 22.764 1 32.7 ? CAD BLA 328 A 1 HETATM 40 C CBD BLA . . . B 2 30.948 40.957 24.198 1 25.56 ? CBD BLA 328 A 1 HETATM 41 C CGD BLA . . . B 2 29.856 41.588 25.025 1 21.96 ? CGD BLA 328 A 1 HETATM 42 O O1D BLA . . . B 2 29.048 40.836 25.586 1 19.76 ? O1D BLA 328 A 1 HETATM 43 O O2D BLA . . . B 2 29.802 42.829 25.134 1 20.48 ? O2D BLA 328 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #