data_1ZWW # _model_server_result.job_id J2Ux3SueWYPt4XsFrbqwfA _model_server_result.datetime_utc '2024-11-12 20:42:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":904}' # _entry.id 1ZWW # _exptl.entry_id 1ZWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZWW _cell.length_a 40.705 _cell.length_b 121.651 _cell.length_c 244.026 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 40.705 0 122.013 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 108 A CYS 108 1_555 C CD CD . A CD 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc2 A SG CYS 108 A CYS 108 1_555 E CD CD . A CD 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc3 A OE1 GLU 119 A GLU 119 4_566 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc4 A OE2 GLU 119 A GLU 119 4_566 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc5 A OE2 GLU 123 A GLU 123 1_555 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc6 A OE1 GLU 123 A GLU 123 1_555 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc7 A OE2 GLU 123 A GLU 123 4_566 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc8 A OE1 GLU 126 A GLU 126 1_555 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc9 A OE2 GLU 126 A GLU 126 1_555 D CD CD . A CD 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc10 A NE2 HIS 147 A HIS 147 1_555 F CD CD . A CD 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc11 A NE2 HIS 157 A HIS 157 1_555 G CD CD . A CD 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc12 A OD2 ASP 180 A ASP 180 3_655 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc13 A OD1 ASP 180 A ASP 180 3_655 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? metalc ? metalc14 A OD1 ASP 191 A ASP 191 3_655 H CD CD . A CD 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.137 ? metalc ? metalc15 A OD2 ASP 191 A ASP 191 3_655 H CD CD . A CD 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc16 A OE1 GLU 198 A GLU 198 1_555 H CD CD . A CD 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc17 A OE2 GLU 198 A GLU 198 1_555 H CD CD . A CD 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc18 C CD CD . A CD 900 1_555 O O HOH . B HOH 941 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc19 F CD CD . A CD 906 1_555 N O HOH . A HOH 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.033 ? metalc ? metalc20 H CD CD . A CD 911 1_555 N O HOH . A HOH 918 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? metalc ? metalc21 N O HOH . A HOH 921 1_555 J CD CD . B CD 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc22 N O HOH . A HOH 921 1_555 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc23 N O HOH . A HOH 928 1_555 J CD CD . B CD 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc24 N O HOH . A HOH 929 3_655 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc25 B OD2 ASP 106 B ASP 106 1_555 J CD CD . B CD 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc26 B OD1 ASP 106 B ASP 106 1_555 J CD CD . B CD 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc27 B SG CYS 108 B CYS 108 1_555 J CD CD . B CD 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc28 B SG CYS 108 B CYS 108 1_555 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc29 B OE2 GLU 123 B GLU 123 1_555 I CD CD . B CD 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc30 B OE1 GLU 123 B GLU 123 1_555 I CD CD . B CD 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc31 B OE1 GLU 126 B GLU 126 1_555 I CD CD . B CD 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc32 B NE2 HIS 147 B HIS 147 1_555 L CD CD . B CD 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc33 B ND1 HIS 156 B HIS 156 8_466 I CD CD . B CD 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc34 B NE2 HIS 157 B HIS 157 1_555 M CD CD . B CD 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc35 I CD CD . B CD 901 1_555 O O HOH . B HOH 937 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc36 J CD CD . B CD 904 1_555 K CD CD . B CD 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.025 ? metalc ? metalc37 L CD CD . B CD 909 1_555 O O HOH . B HOH 939 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.991 ? metalc ? metalc38 M CD CD . B CD 910 1_555 O O HOH . B HOH 945 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZWW _atom_sites.fract_transf_matrix[1][1] 0.024567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00822 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004098 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD A 1 900 900 CD CD . D 2 CD A 1 902 902 CD CD . E 2 CD A 1 903 903 CD CD . F 2 CD A 1 906 906 CD CD . G 2 CD A 1 907 907 CD CD . H 2 CD A 1 911 911 CD CD . I 2 CD B 1 901 901 CD CD . J 2 CD B 1 904 904 CD CD . K 2 CD B 1 905 905 CD CD . L 2 CD B 1 909 909 CD CD . M 2 CD B 1 910 910 CD CD . N 3 HOH A 1 912 1 HOH HOH . N 3 HOH A 2 913 3 HOH HOH . N 3 HOH A 3 914 4 HOH HOH . N 3 HOH A 4 915 5 HOH HOH . N 3 HOH A 5 916 7 HOH HOH . N 3 HOH A 6 917 8 HOH HOH . N 3 HOH A 7 918 9 HOH HOH . N 3 HOH A 8 919 10 HOH HOH . N 3 HOH A 9 920 16 HOH HOH . N 3 HOH A 10 921 19 HOH HOH . N 3 HOH A 11 922 22 HOH HOH . N 3 HOH A 12 923 23 HOH HOH . N 3 HOH A 13 924 24 HOH HOH . N 3 HOH A 14 925 36 HOH HOH . N 3 HOH A 15 926 37 HOH HOH . N 3 HOH A 16 927 38 HOH HOH . N 3 HOH A 17 928 43 HOH HOH . N 3 HOH A 18 929 44 HOH HOH . N 3 HOH A 19 930 52 HOH HOH . N 3 HOH A 20 931 53 HOH HOH . N 3 HOH A 21 932 54 HOH HOH . N 3 HOH A 22 933 58 HOH HOH . N 3 HOH A 23 934 59 HOH HOH . N 3 HOH A 24 935 60 HOH HOH . N 3 HOH A 25 936 61 HOH HOH . N 3 HOH A 26 937 62 HOH HOH . N 3 HOH A 27 938 63 HOH HOH . N 3 HOH A 28 939 64 HOH HOH . N 3 HOH A 29 940 65 HOH HOH . N 3 HOH A 30 941 66 HOH HOH . N 3 HOH A 31 942 67 HOH HOH . O 3 HOH B 1 911 2 HOH HOH . O 3 HOH B 2 912 6 HOH HOH . O 3 HOH B 3 913 11 HOH HOH . O 3 HOH B 4 914 12 HOH HOH . O 3 HOH B 5 915 13 HOH HOH . O 3 HOH B 6 916 14 HOH HOH . O 3 HOH B 7 917 15 HOH HOH . O 3 HOH B 8 918 17 HOH HOH . O 3 HOH B 9 919 18 HOH HOH . O 3 HOH B 10 920 20 HOH HOH . O 3 HOH B 11 921 21 HOH HOH . O 3 HOH B 12 922 25 HOH HOH . O 3 HOH B 13 923 26 HOH HOH . O 3 HOH B 14 924 27 HOH HOH . O 3 HOH B 15 925 28 HOH HOH . O 3 HOH B 16 926 29 HOH HOH . O 3 HOH B 17 927 30 HOH HOH . O 3 HOH B 18 928 31 HOH HOH . O 3 HOH B 19 929 32 HOH HOH . O 3 HOH B 20 930 33 HOH HOH . O 3 HOH B 21 931 34 HOH HOH . O 3 HOH B 22 932 35 HOH HOH . O 3 HOH B 23 933 39 HOH HOH . O 3 HOH B 24 934 40 HOH HOH . O 3 HOH B 25 935 41 HOH HOH . O 3 HOH B 26 936 42 HOH HOH . O 3 HOH B 27 937 45 HOH HOH . O 3 HOH B 28 938 46 HOH HOH . O 3 HOH B 29 939 47 HOH HOH . O 3 HOH B 30 940 48 HOH HOH . O 3 HOH B 31 941 49 HOH HOH . O 3 HOH B 32 942 50 HOH HOH . O 3 HOH B 33 943 51 HOH HOH . O 3 HOH B 34 944 55 HOH HOH . O 3 HOH B 35 945 56 HOH HOH . O 3 HOH B 36 946 57 HOH HOH . O 3 HOH B 37 947 68 HOH HOH . O 3 HOH B 38 948 69 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.303 _atom_site.Cartn_y 71.126 _atom_site.Cartn_z 76.883 _atom_site.occupancy 0.62 _atom_site.B_iso_or_equiv 30.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 904 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #