data_1ZX5 # _model_server_result.job_id P0IUQUAeai2D1l_jFERUEg _model_server_result.datetime_utc '2024-11-28 03:06:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zx5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":700}' # _entry.id 1ZX5 # _exptl.entry_id 1ZX5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZX5 _cell.length_a 160.045 _cell.length_b 160.045 _cell.length_c 160.045 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZX5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N GLU 3 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C SER 60 A SER 59 1_555 A N MSE 61 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale4 A C MSE 61 A MSE 60 1_555 A N ILE 62 A ILE 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C GLY 223 A GLY 222 1_555 A N MSE 224 A MSE 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C MSE 224 A MSE 223 1_555 A N ALA 225 A ALA 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C VAL 248 A VAL 247 1_555 A N MSE 249 A MSE 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 A C MSE 249 A MSE 248 1_555 A N ASN 250 A ASN 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 145 n n C1 C2 GOL sing 146 n n C1 H11 GOL sing 147 n n C1 H12 GOL sing 148 n n O1 HO1 GOL sing 149 n n C2 O2 GOL sing 150 n n C2 C3 GOL sing 151 n n C2 H2 GOL sing 152 n n O2 HO2 GOL sing 153 n n C3 O3 GOL sing 154 n n C3 H31 GOL sing 155 n n C3 H32 GOL sing 156 n n O3 HO3 GOL sing 157 n n # _atom_sites.entry_id 1ZX5 _atom_sites.fract_transf_matrix[1][1] 0.006248 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006248 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LFR A 1 600 600 LFR FRU . C 3 EDO A 1 800 800 EDO EDO . D 3 EDO A 1 801 801 EDO EDO . E 4 ACY A 1 502 502 ACY ACY . F 4 ACY A 1 503 503 ACY ACY . G 4 ACY A 1 504 504 ACY ACY . H 4 ACY A 1 505 505 ACY ACY . I 4 ACY A 1 506 506 ACY ACY . J 4 ACY A 1 507 507 ACY ACY . K 5 GOL A 1 700 700 GOL GOL . L 6 HOH A 1 802 1 HOH HOH . L 6 HOH A 2 803 2 HOH HOH . L 6 HOH A 3 804 3 HOH HOH . L 6 HOH A 4 805 4 HOH HOH . L 6 HOH A 5 806 5 HOH HOH . L 6 HOH A 6 807 6 HOH HOH . L 6 HOH A 7 808 7 HOH HOH . L 6 HOH A 8 809 8 HOH HOH . L 6 HOH A 9 810 9 HOH HOH . L 6 HOH A 10 811 10 HOH HOH . L 6 HOH A 11 812 11 HOH HOH . L 6 HOH A 12 813 12 HOH HOH . L 6 HOH A 13 814 13 HOH HOH . L 6 HOH A 14 815 14 HOH HOH . L 6 HOH A 15 816 15 HOH HOH . L 6 HOH A 16 817 16 HOH HOH . L 6 HOH A 17 818 17 HOH HOH . L 6 HOH A 18 819 18 HOH HOH . L 6 HOH A 19 820 19 HOH HOH . L 6 HOH A 20 821 20 HOH HOH . L 6 HOH A 21 822 21 HOH HOH . L 6 HOH A 22 823 22 HOH HOH . L 6 HOH A 23 824 23 HOH HOH . L 6 HOH A 24 825 24 HOH HOH . L 6 HOH A 25 826 25 HOH HOH . L 6 HOH A 26 827 26 HOH HOH . L 6 HOH A 27 828 27 HOH HOH . L 6 HOH A 28 829 28 HOH HOH . L 6 HOH A 29 830 29 HOH HOH . L 6 HOH A 30 831 30 HOH HOH . L 6 HOH A 31 832 31 HOH HOH . L 6 HOH A 32 833 32 HOH HOH . L 6 HOH A 33 834 33 HOH HOH . L 6 HOH A 34 835 34 HOH HOH . L 6 HOH A 35 836 35 HOH HOH . L 6 HOH A 36 837 36 HOH HOH . L 6 HOH A 37 838 37 HOH HOH . L 6 HOH A 38 839 38 HOH HOH . L 6 HOH A 39 840 39 HOH HOH . L 6 HOH A 40 841 40 HOH HOH . L 6 HOH A 41 842 41 HOH HOH . L 6 HOH A 42 843 42 HOH HOH . L 6 HOH A 43 844 43 HOH HOH . L 6 HOH A 44 845 44 HOH HOH . L 6 HOH A 45 846 45 HOH HOH . L 6 HOH A 46 847 46 HOH HOH . L 6 HOH A 47 848 47 HOH HOH . L 6 HOH A 48 849 48 HOH HOH . L 6 HOH A 49 850 49 HOH HOH . L 6 HOH A 50 851 50 HOH HOH . L 6 HOH A 51 852 51 HOH HOH . L 6 HOH A 52 853 52 HOH HOH . L 6 HOH A 53 854 53 HOH HOH . L 6 HOH A 54 855 54 HOH HOH . L 6 HOH A 55 856 55 HOH HOH . L 6 HOH A 56 857 56 HOH HOH . L 6 HOH A 57 858 57 HOH HOH . L 6 HOH A 58 859 58 HOH HOH . L 6 HOH A 59 860 59 HOH HOH . L 6 HOH A 60 861 60 HOH HOH . L 6 HOH A 61 862 61 HOH HOH . L 6 HOH A 62 863 62 HOH HOH . L 6 HOH A 63 864 63 HOH HOH . L 6 HOH A 64 865 64 HOH HOH . L 6 HOH A 65 866 65 HOH HOH . L 6 HOH A 66 867 66 HOH HOH . L 6 HOH A 67 868 67 HOH HOH . L 6 HOH A 68 869 68 HOH HOH . L 6 HOH A 69 870 69 HOH HOH . L 6 HOH A 70 871 70 HOH HOH . L 6 HOH A 71 872 71 HOH HOH . L 6 HOH A 72 873 72 HOH HOH . L 6 HOH A 73 874 73 HOH HOH . L 6 HOH A 74 875 74 HOH HOH . L 6 HOH A 75 876 75 HOH HOH . L 6 HOH A 76 877 76 HOH HOH . L 6 HOH A 77 878 77 HOH HOH . L 6 HOH A 78 879 78 HOH HOH . L 6 HOH A 79 880 79 HOH HOH . L 6 HOH A 80 881 80 HOH HOH . L 6 HOH A 81 882 81 HOH HOH . L 6 HOH A 82 883 82 HOH HOH . L 6 HOH A 83 884 83 HOH HOH . L 6 HOH A 84 885 84 HOH HOH . L 6 HOH A 85 886 85 HOH HOH . L 6 HOH A 86 887 86 HOH HOH . L 6 HOH A 87 888 87 HOH HOH . L 6 HOH A 88 889 88 HOH HOH . L 6 HOH A 89 890 89 HOH HOH . L 6 HOH A 90 891 90 HOH HOH . L 6 HOH A 91 892 91 HOH HOH . L 6 HOH A 92 893 92 HOH HOH . L 6 HOH A 93 894 93 HOH HOH . L 6 HOH A 94 895 94 HOH HOH . L 6 HOH A 95 896 95 HOH HOH . L 6 HOH A 96 897 96 HOH HOH . L 6 HOH A 97 898 97 HOH HOH . L 6 HOH A 98 899 98 HOH HOH . L 6 HOH A 99 900 99 HOH HOH . L 6 HOH A 100 901 100 HOH HOH . L 6 HOH A 101 902 101 HOH HOH . L 6 HOH A 102 903 102 HOH HOH . L 6 HOH A 103 904 103 HOH HOH . L 6 HOH A 104 905 104 HOH HOH . L 6 HOH A 105 906 105 HOH HOH . L 6 HOH A 106 907 106 HOH HOH . L 6 HOH A 107 908 107 HOH HOH . L 6 HOH A 108 909 108 HOH HOH . L 6 HOH A 109 910 109 HOH HOH . L 6 HOH A 110 911 110 HOH HOH . L 6 HOH A 111 912 111 HOH HOH . L 6 HOH A 112 913 112 HOH HOH . L 6 HOH A 113 914 113 HOH HOH . L 6 HOH A 114 915 114 HOH HOH . L 6 HOH A 115 916 115 HOH HOH . L 6 HOH A 116 917 116 HOH HOH . L 6 HOH A 117 918 117 HOH HOH . L 6 HOH A 118 919 118 HOH HOH . L 6 HOH A 119 920 119 HOH HOH . L 6 HOH A 120 921 120 HOH HOH . L 6 HOH A 121 922 121 HOH HOH . L 6 HOH A 122 923 122 HOH HOH . L 6 HOH A 123 924 123 HOH HOH . L 6 HOH A 124 925 124 HOH HOH . L 6 HOH A 125 926 125 HOH HOH . L 6 HOH A 126 927 126 HOH HOH . L 6 HOH A 127 928 127 HOH HOH . L 6 HOH A 128 929 128 HOH HOH . L 6 HOH A 129 930 129 HOH HOH . L 6 HOH A 130 931 130 HOH HOH . L 6 HOH A 131 932 131 HOH HOH . L 6 HOH A 132 933 132 HOH HOH . L 6 HOH A 133 934 133 HOH HOH . L 6 HOH A 134 935 134 HOH HOH . L 6 HOH A 135 936 135 HOH HOH . L 6 HOH A 136 937 136 HOH HOH . L 6 HOH A 137 938 137 HOH HOH . L 6 HOH A 138 939 138 HOH HOH . L 6 HOH A 139 940 139 HOH HOH . L 6 HOH A 140 941 140 HOH HOH . L 6 HOH A 141 942 141 HOH HOH . L 6 HOH A 142 943 142 HOH HOH . L 6 HOH A 143 944 143 HOH HOH . L 6 HOH A 144 945 144 HOH HOH . L 6 HOH A 145 946 145 HOH HOH . L 6 HOH A 146 947 146 HOH HOH . L 6 HOH A 147 948 147 HOH HOH . L 6 HOH A 148 949 148 HOH HOH . L 6 HOH A 149 950 149 HOH HOH . L 6 HOH A 150 951 150 HOH HOH . L 6 HOH A 151 952 151 HOH HOH . L 6 HOH A 152 953 152 HOH HOH . L 6 HOH A 153 954 153 HOH HOH . L 6 HOH A 154 955 154 HOH HOH . L 6 HOH A 155 956 155 HOH HOH . L 6 HOH A 156 957 156 HOH HOH . L 6 HOH A 157 958 157 HOH HOH . L 6 HOH A 158 959 158 HOH HOH . L 6 HOH A 159 960 159 HOH HOH . L 6 HOH A 160 961 160 HOH HOH . L 6 HOH A 161 962 161 HOH HOH . L 6 HOH A 162 963 162 HOH HOH . L 6 HOH A 163 964 163 HOH HOH . L 6 HOH A 164 965 164 HOH HOH . L 6 HOH A 165 966 165 HOH HOH . L 6 HOH A 166 967 166 HOH HOH . L 6 HOH A 167 968 167 HOH HOH . L 6 HOH A 168 969 168 HOH HOH . L 6 HOH A 169 970 169 HOH HOH . L 6 HOH A 170 971 170 HOH HOH . L 6 HOH A 171 972 171 HOH HOH . L 6 HOH A 172 973 172 HOH HOH . L 6 HOH A 173 974 173 HOH HOH . L 6 HOH A 174 975 174 HOH HOH . L 6 HOH A 175 976 175 HOH HOH . L 6 HOH A 176 977 176 HOH HOH . L 6 HOH A 177 978 177 HOH HOH . L 6 HOH A 178 979 178 HOH HOH . L 6 HOH A 179 980 179 HOH HOH . L 6 HOH A 180 981 180 HOH HOH . L 6 HOH A 181 982 181 HOH HOH . L 6 HOH A 182 983 182 HOH HOH . L 6 HOH A 183 984 183 HOH HOH . L 6 HOH A 184 985 184 HOH HOH . L 6 HOH A 185 986 185 HOH HOH . L 6 HOH A 186 987 186 HOH HOH . L 6 HOH A 187 988 187 HOH HOH . L 6 HOH A 188 989 188 HOH HOH . L 6 HOH A 189 990 189 HOH HOH . L 6 HOH A 190 991 190 HOH HOH . L 6 HOH A 191 992 191 HOH HOH . L 6 HOH A 192 993 192 HOH HOH . L 6 HOH A 193 994 193 HOH HOH . L 6 HOH A 194 995 194 HOH HOH . L 6 HOH A 195 996 195 HOH HOH . L 6 HOH A 196 997 196 HOH HOH . L 6 HOH A 197 998 197 HOH HOH . L 6 HOH A 198 999 198 HOH HOH . L 6 HOH A 199 1000 199 HOH HOH . L 6 HOH A 200 1001 200 HOH HOH . L 6 HOH A 201 1002 201 HOH HOH . L 6 HOH A 202 1003 202 HOH HOH . L 6 HOH A 203 1004 203 HOH HOH . L 6 HOH A 204 1005 204 HOH HOH . L 6 HOH A 205 1006 205 HOH HOH . L 6 HOH A 206 1007 206 HOH HOH . L 6 HOH A 207 1008 207 HOH HOH . L 6 HOH A 208 1009 208 HOH HOH . L 6 HOH A 209 1010 209 HOH HOH . L 6 HOH A 210 1011 210 HOH HOH . L 6 HOH A 211 1012 211 HOH HOH . L 6 HOH A 212 1013 212 HOH HOH . L 6 HOH A 213 1014 213 HOH HOH . L 6 HOH A 214 1015 214 HOH HOH . L 6 HOH A 215 1016 215 HOH HOH . L 6 HOH A 216 1017 216 HOH HOH . L 6 HOH A 217 1018 217 HOH HOH . L 6 HOH A 218 1019 218 HOH HOH . L 6 HOH A 219 1020 219 HOH HOH . L 6 HOH A 220 1021 220 HOH HOH . L 6 HOH A 221 1022 221 HOH HOH . L 6 HOH A 222 1023 222 HOH HOH . L 6 HOH A 223 1024 223 HOH HOH . L 6 HOH A 224 1025 224 HOH HOH . L 6 HOH A 225 1026 225 HOH HOH . L 6 HOH A 226 1027 226 HOH HOH . L 6 HOH A 227 1028 227 HOH HOH . L 6 HOH A 228 1029 228 HOH HOH . L 6 HOH A 229 1030 229 HOH HOH . L 6 HOH A 230 1031 230 HOH HOH . L 6 HOH A 231 1032 231 HOH HOH . L 6 HOH A 232 1033 232 HOH HOH . L 6 HOH A 233 1034 233 HOH HOH . L 6 HOH A 234 1035 234 HOH HOH . L 6 HOH A 235 1036 235 HOH HOH . L 6 HOH A 236 1037 236 HOH HOH . L 6 HOH A 237 1038 237 HOH HOH . L 6 HOH A 238 1039 238 HOH HOH . L 6 HOH A 239 1040 239 HOH HOH . L 6 HOH A 240 1041 240 HOH HOH . L 6 HOH A 241 1042 241 HOH HOH . L 6 HOH A 242 1043 242 HOH HOH . L 6 HOH A 243 1044 243 HOH HOH . L 6 HOH A 244 1045 244 HOH HOH . L 6 HOH A 245 1046 245 HOH HOH . L 6 HOH A 246 1047 246 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 5 70.854 92.959 45.252 1 53.35 ? C1 GOL 700 A 1 HETATM 2 O O1 GOL . . . K 5 70.115 92.671 46.434 1 53.24 ? O1 GOL 700 A 1 HETATM 3 C C2 GOL . . . K 5 72.335 92.572 45.381 1 53.75 ? C2 GOL 700 A 1 HETATM 4 O O2 GOL . . . K 5 72.925 92.497 44.095 1 53.29 ? O2 GOL 700 A 1 HETATM 5 C C3 GOL . . . K 5 73.102 93.588 46.233 1 52.6 ? C3 GOL 700 A 1 HETATM 6 O O3 GOL . . . K 5 74.438 93.192 46.501 1 52.3 ? O3 GOL 700 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #