data_1ZY1 # _model_server_result.job_id qyjkJxOaVVf-ZPtAr61Vlg _model_server_result.datetime_utc '2024-11-06 22:32:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zy1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":198}' # _entry.id 1ZY1 # _exptl.entry_id 1ZY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZY1 _cell.length_a 51.6 _cell.length_b 76.3 _cell.length_c 109.3 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZY1 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 111 A CYS 111 1_555 E ZN ZN . A ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc2 A NE2 HIS 153 A HIS 153 1_555 E ZN ZN . A ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc3 A NE2 HIS 157 A HIS 157 1_555 E ZN ZN . A ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc4 E ZN ZN . A ZN 198 1_555 G O HOH . A HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc5 E ZN ZN . A ZN 198 1_555 I O HOH . D HOH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc6 B SG CYS 111 B CYS 111 1_555 F ZN ZN . B ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc7 B NE2 HIS 153 B HIS 153 1_555 F ZN ZN . B ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc8 B NE2 HIS 157 B HIS 157 1_555 F ZN ZN . B ZN 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc9 F ZN ZN . B ZN 198 1_555 H O HOH . B HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZY1 _atom_sites.fract_transf_matrix[1][1] 0.01938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013106 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009149 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 198 1 ZN ZN . F 3 ZN B 1 198 2 ZN ZN . G 4 HOH A 1 199 4 HOH HOH . G 4 HOH A 2 200 6 HOH HOH . G 4 HOH A 3 201 8 HOH HOH . G 4 HOH A 4 202 9 HOH HOH . G 4 HOH A 5 203 10 HOH HOH . G 4 HOH A 6 204 11 HOH HOH . G 4 HOH A 7 205 12 HOH HOH . G 4 HOH A 8 206 13 HOH HOH . G 4 HOH A 9 207 14 HOH HOH . G 4 HOH A 10 208 17 HOH HOH . G 4 HOH A 11 209 22 HOH HOH . G 4 HOH A 12 210 23 HOH HOH . G 4 HOH A 13 211 25 HOH HOH . G 4 HOH A 14 212 27 HOH HOH . G 4 HOH A 15 213 30 HOH HOH . G 4 HOH A 16 214 34 HOH HOH . G 4 HOH A 17 215 38 HOH HOH . G 4 HOH A 18 216 39 HOH HOH . G 4 HOH A 19 217 40 HOH HOH . G 4 HOH A 20 218 47 HOH HOH . G 4 HOH A 21 219 48 HOH HOH . G 4 HOH A 22 220 49 HOH HOH . G 4 HOH A 23 221 50 HOH HOH . G 4 HOH A 24 222 54 HOH HOH . G 4 HOH A 25 223 61 HOH HOH . G 4 HOH A 26 224 63 HOH HOH . G 4 HOH A 27 225 67 HOH HOH . G 4 HOH A 28 226 71 HOH HOH . G 4 HOH A 29 227 72 HOH HOH . G 4 HOH A 30 228 73 HOH HOH . H 4 HOH B 1 199 5 HOH HOH . H 4 HOH B 2 200 7 HOH HOH . H 4 HOH B 3 201 15 HOH HOH . H 4 HOH B 4 202 16 HOH HOH . H 4 HOH B 5 203 18 HOH HOH . H 4 HOH B 6 204 19 HOH HOH . H 4 HOH B 7 205 20 HOH HOH . H 4 HOH B 8 206 26 HOH HOH . H 4 HOH B 9 207 28 HOH HOH . H 4 HOH B 10 208 29 HOH HOH . H 4 HOH B 11 209 31 HOH HOH . H 4 HOH B 12 210 32 HOH HOH . H 4 HOH B 13 211 33 HOH HOH . H 4 HOH B 14 212 35 HOH HOH . H 4 HOH B 15 213 37 HOH HOH . H 4 HOH B 16 214 42 HOH HOH . H 4 HOH B 17 215 43 HOH HOH . H 4 HOH B 18 216 44 HOH HOH . H 4 HOH B 19 217 45 HOH HOH . H 4 HOH B 20 218 46 HOH HOH . H 4 HOH B 21 219 51 HOH HOH . H 4 HOH B 22 220 52 HOH HOH . H 4 HOH B 23 221 55 HOH HOH . H 4 HOH B 24 222 56 HOH HOH . H 4 HOH B 25 223 57 HOH HOH . H 4 HOH B 26 224 58 HOH HOH . H 4 HOH B 27 225 59 HOH HOH . H 4 HOH B 28 226 60 HOH HOH . H 4 HOH B 29 227 62 HOH HOH . H 4 HOH B 30 228 64 HOH HOH . H 4 HOH B 31 229 65 HOH HOH . H 4 HOH B 32 230 66 HOH HOH . H 4 HOH B 33 231 68 HOH HOH . H 4 HOH B 34 232 69 HOH HOH . H 4 HOH B 35 233 70 HOH HOH . I 4 HOH D 1 4 3 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 12.292 _atom_site.Cartn_y -12.677 _atom_site.Cartn_z -16.021 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 198 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #