data_1ZY5 # _model_server_result.job_id XxvFvBXha0DR5kE6NN0cMQ _model_server_result.datetime_utc '2024-11-25 07:59:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zy5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":306}' # _entry.id 1ZY5 # _exptl.entry_id 1ZY5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZY5 _cell.length_a 52.61 _cell.length_b 78.919 _cell.length_c 146.299 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZY5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 G O HOH . A HOH 205 1_555 C MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc2 D O1A ANP . A ANP 303 1_555 C MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc3 D O3G ANP . A ANP 303 1_555 C MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc4 D O2G ANP . A ANP 303 1_555 C MG MG . A MG 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc5 F O2G ANP . B ANP 304 1_555 E MG MG . B MG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc6 F O1B ANP . B ANP 304 1_555 E MG MG . B MG 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZY5 _atom_sites.fract_transf_matrix[1][1] 0.019008 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006835 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 305 305 MG MG . D 3 ANP A 1 303 303 ANP ANP . E 2 MG B 1 306 306 MG MG . F 3 ANP B 1 304 304 ANP ANP . G 4 HOH A 1 1 1 HOH HOH . G 4 HOH A 2 2 2 HOH HOH . G 4 HOH A 3 3 3 HOH HOH . G 4 HOH A 4 4 4 HOH HOH . G 4 HOH A 5 5 5 HOH HOH . G 4 HOH A 6 6 6 HOH HOH . G 4 HOH A 7 7 7 HOH HOH . G 4 HOH A 8 8 8 HOH HOH . G 4 HOH A 9 9 9 HOH HOH . G 4 HOH A 10 10 10 HOH HOH . G 4 HOH A 11 11 11 HOH HOH . G 4 HOH A 12 12 12 HOH HOH . G 4 HOH A 13 13 13 HOH HOH . G 4 HOH A 14 14 14 HOH HOH . G 4 HOH A 15 15 15 HOH HOH . G 4 HOH A 16 16 16 HOH HOH . G 4 HOH A 17 17 17 HOH HOH . G 4 HOH A 18 18 18 HOH HOH . G 4 HOH A 19 19 19 HOH HOH . G 4 HOH A 20 20 20 HOH HOH . G 4 HOH A 21 21 21 HOH HOH . G 4 HOH A 22 22 22 HOH HOH . G 4 HOH A 23 23 23 HOH HOH . G 4 HOH A 24 24 24 HOH HOH . G 4 HOH A 25 26 26 HOH HOH . G 4 HOH A 26 27 27 HOH HOH . G 4 HOH A 27 28 28 HOH HOH . G 4 HOH A 28 29 29 HOH HOH . G 4 HOH A 29 30 30 HOH HOH . G 4 HOH A 30 31 31 HOH HOH . G 4 HOH A 31 32 32 HOH HOH . G 4 HOH A 32 33 33 HOH HOH . G 4 HOH A 33 34 34 HOH HOH . G 4 HOH A 34 35 35 HOH HOH . G 4 HOH A 35 36 36 HOH HOH . G 4 HOH A 36 38 38 HOH HOH . G 4 HOH A 37 39 39 HOH HOH . G 4 HOH A 38 40 40 HOH HOH . G 4 HOH A 39 44 44 HOH HOH . G 4 HOH A 40 45 45 HOH HOH . G 4 HOH A 41 46 46 HOH HOH . G 4 HOH A 42 47 47 HOH HOH . G 4 HOH A 43 49 49 HOH HOH . G 4 HOH A 44 50 50 HOH HOH . G 4 HOH A 45 51 51 HOH HOH . G 4 HOH A 46 52 52 HOH HOH . G 4 HOH A 47 53 53 HOH HOH . G 4 HOH A 48 55 55 HOH HOH . G 4 HOH A 49 59 59 HOH HOH . G 4 HOH A 50 61 61 HOH HOH . G 4 HOH A 51 63 63 HOH HOH . G 4 HOH A 52 64 64 HOH HOH . G 4 HOH A 53 65 65 HOH HOH . G 4 HOH A 54 67 67 HOH HOH . G 4 HOH A 55 68 68 HOH HOH . G 4 HOH A 56 69 69 HOH HOH . G 4 HOH A 57 71 71 HOH HOH . G 4 HOH A 58 72 72 HOH HOH . G 4 HOH A 59 73 73 HOH HOH . G 4 HOH A 60 74 74 HOH HOH . G 4 HOH A 61 75 75 HOH HOH . G 4 HOH A 62 77 77 HOH HOH . G 4 HOH A 63 78 78 HOH HOH . G 4 HOH A 64 79 79 HOH HOH . G 4 HOH A 65 80 80 HOH HOH . G 4 HOH A 66 82 82 HOH HOH . G 4 HOH A 67 83 83 HOH HOH . G 4 HOH A 68 86 86 HOH HOH . G 4 HOH A 69 88 88 HOH HOH . G 4 HOH A 70 90 90 HOH HOH . G 4 HOH A 71 91 91 HOH HOH . G 4 HOH A 72 92 92 HOH HOH . G 4 HOH A 73 93 93 HOH HOH . G 4 HOH A 74 94 94 HOH HOH . G 4 HOH A 75 95 95 HOH HOH . G 4 HOH A 76 97 97 HOH HOH . G 4 HOH A 77 99 99 HOH HOH . G 4 HOH A 78 100 100 HOH HOH . G 4 HOH A 79 101 101 HOH HOH . G 4 HOH A 80 103 103 HOH HOH . G 4 HOH A 81 104 104 HOH HOH . G 4 HOH A 82 106 106 HOH HOH . G 4 HOH A 83 107 107 HOH HOH . G 4 HOH A 84 108 108 HOH HOH . G 4 HOH A 85 110 110 HOH HOH . G 4 HOH A 86 112 112 HOH HOH . G 4 HOH A 87 113 113 HOH HOH . G 4 HOH A 88 114 114 HOH HOH . G 4 HOH A 89 115 115 HOH HOH . G 4 HOH A 90 118 118 HOH HOH . G 4 HOH A 91 119 119 HOH HOH . G 4 HOH A 92 120 120 HOH HOH . G 4 HOH A 93 121 121 HOH HOH . G 4 HOH A 94 123 123 HOH HOH . G 4 HOH A 95 124 124 HOH HOH . G 4 HOH A 96 126 126 HOH HOH . G 4 HOH A 97 127 127 HOH HOH . G 4 HOH A 98 128 128 HOH HOH . G 4 HOH A 99 129 129 HOH HOH . G 4 HOH A 100 131 131 HOH HOH . G 4 HOH A 101 132 132 HOH HOH . G 4 HOH A 102 134 134 HOH HOH . G 4 HOH A 103 135 135 HOH HOH . G 4 HOH A 104 138 138 HOH HOH . G 4 HOH A 105 139 139 HOH HOH . G 4 HOH A 106 141 141 HOH HOH . G 4 HOH A 107 146 146 HOH HOH . G 4 HOH A 108 147 147 HOH HOH . G 4 HOH A 109 148 148 HOH HOH . G 4 HOH A 110 149 149 HOH HOH . G 4 HOH A 111 150 150 HOH HOH . G 4 HOH A 112 151 151 HOH HOH . G 4 HOH A 113 152 152 HOH HOH . G 4 HOH A 114 153 153 HOH HOH . G 4 HOH A 115 154 154 HOH HOH . G 4 HOH A 116 158 158 HOH HOH . G 4 HOH A 117 159 159 HOH HOH . G 4 HOH A 118 160 160 HOH HOH . G 4 HOH A 119 161 161 HOH HOH . G 4 HOH A 120 162 162 HOH HOH . G 4 HOH A 121 164 164 HOH HOH . G 4 HOH A 122 165 165 HOH HOH . G 4 HOH A 123 166 166 HOH HOH . G 4 HOH A 124 167 167 HOH HOH . G 4 HOH A 125 168 168 HOH HOH . G 4 HOH A 126 169 169 HOH HOH . G 4 HOH A 127 170 170 HOH HOH . G 4 HOH A 128 171 171 HOH HOH . G 4 HOH A 129 172 172 HOH HOH . G 4 HOH A 130 173 173 HOH HOH . G 4 HOH A 131 174 174 HOH HOH . G 4 HOH A 132 175 175 HOH HOH . G 4 HOH A 133 188 188 HOH HOH . G 4 HOH A 134 189 189 HOH HOH . G 4 HOH A 135 190 190 HOH HOH . G 4 HOH A 136 191 191 HOH HOH . G 4 HOH A 137 192 192 HOH HOH . G 4 HOH A 138 193 193 HOH HOH . G 4 HOH A 139 194 194 HOH HOH . G 4 HOH A 140 195 195 HOH HOH . G 4 HOH A 141 196 196 HOH HOH . G 4 HOH A 142 197 197 HOH HOH . G 4 HOH A 143 198 198 HOH HOH . G 4 HOH A 144 199 199 HOH HOH . G 4 HOH A 145 200 200 HOH HOH . G 4 HOH A 146 205 205 HOH HOH . G 4 HOH A 147 206 206 HOH HOH . G 4 HOH A 148 209 209 HOH HOH . G 4 HOH A 149 216 216 HOH HOH . G 4 HOH A 150 225 225 HOH HOH . G 4 HOH A 151 226 226 HOH HOH . G 4 HOH A 152 227 227 HOH HOH . G 4 HOH A 153 228 228 HOH HOH . G 4 HOH A 154 229 229 HOH HOH . G 4 HOH A 155 230 230 HOH HOH . G 4 HOH A 156 231 231 HOH HOH . H 4 HOH B 1 25 25 HOH HOH . H 4 HOH B 2 37 37 HOH HOH . H 4 HOH B 3 41 41 HOH HOH . H 4 HOH B 4 42 42 HOH HOH . H 4 HOH B 5 43 43 HOH HOH . H 4 HOH B 6 48 48 HOH HOH . H 4 HOH B 7 54 54 HOH HOH . H 4 HOH B 8 56 56 HOH HOH . H 4 HOH B 9 57 57 HOH HOH . H 4 HOH B 10 58 58 HOH HOH . H 4 HOH B 11 60 60 HOH HOH . H 4 HOH B 12 62 62 HOH HOH . H 4 HOH B 13 66 66 HOH HOH . H 4 HOH B 14 70 70 HOH HOH . H 4 HOH B 15 76 76 HOH HOH . H 4 HOH B 16 81 81 HOH HOH . H 4 HOH B 17 84 84 HOH HOH . H 4 HOH B 18 85 85 HOH HOH . H 4 HOH B 19 87 87 HOH HOH . H 4 HOH B 20 89 89 HOH HOH . H 4 HOH B 21 96 96 HOH HOH . H 4 HOH B 22 98 98 HOH HOH . H 4 HOH B 23 102 102 HOH HOH . H 4 HOH B 24 105 105 HOH HOH . H 4 HOH B 25 109 109 HOH HOH . H 4 HOH B 26 111 111 HOH HOH . H 4 HOH B 27 116 116 HOH HOH . H 4 HOH B 28 117 117 HOH HOH . H 4 HOH B 29 122 122 HOH HOH . H 4 HOH B 30 125 125 HOH HOH . H 4 HOH B 31 130 130 HOH HOH . H 4 HOH B 32 133 133 HOH HOH . H 4 HOH B 33 136 136 HOH HOH . H 4 HOH B 34 137 137 HOH HOH . H 4 HOH B 35 140 140 HOH HOH . H 4 HOH B 36 142 142 HOH HOH . H 4 HOH B 37 143 143 HOH HOH . H 4 HOH B 38 144 144 HOH HOH . H 4 HOH B 39 145 145 HOH HOH . H 4 HOH B 40 155 155 HOH HOH . H 4 HOH B 41 156 156 HOH HOH . H 4 HOH B 42 157 157 HOH HOH . H 4 HOH B 43 163 163 HOH HOH . H 4 HOH B 44 176 176 HOH HOH . H 4 HOH B 45 177 177 HOH HOH . H 4 HOH B 46 178 178 HOH HOH . H 4 HOH B 47 179 179 HOH HOH . H 4 HOH B 48 180 180 HOH HOH . H 4 HOH B 49 181 181 HOH HOH . H 4 HOH B 50 182 182 HOH HOH . H 4 HOH B 51 183 183 HOH HOH . H 4 HOH B 52 184 184 HOH HOH . H 4 HOH B 53 185 185 HOH HOH . H 4 HOH B 54 186 186 HOH HOH . H 4 HOH B 55 187 187 HOH HOH . H 4 HOH B 56 201 201 HOH HOH . H 4 HOH B 57 202 202 HOH HOH . H 4 HOH B 58 203 203 HOH HOH . H 4 HOH B 59 204 204 HOH HOH . H 4 HOH B 60 207 207 HOH HOH . H 4 HOH B 61 208 208 HOH HOH . H 4 HOH B 62 210 210 HOH HOH . H 4 HOH B 63 211 211 HOH HOH . H 4 HOH B 64 212 212 HOH HOH . H 4 HOH B 65 213 213 HOH HOH . H 4 HOH B 66 214 214 HOH HOH . H 4 HOH B 67 215 215 HOH HOH . H 4 HOH B 68 217 217 HOH HOH . H 4 HOH B 69 218 218 HOH HOH . H 4 HOH B 70 219 219 HOH HOH . H 4 HOH B 71 220 220 HOH HOH . H 4 HOH B 72 221 221 HOH HOH . H 4 HOH B 73 222 222 HOH HOH . H 4 HOH B 74 223 223 HOH HOH . H 4 HOH B 75 224 224 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 7.473 _atom_site.Cartn_y 22.782 _atom_site.Cartn_z 35.809 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 94.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 306 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #