data_1ZZ9 # _model_server_result.job_id XOiZDQWL-nkcMyHDyviO8g _model_server_result.datetime_utc '2024-10-24 07:17:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":199}' # _entry.id 1ZZ9 # _exptl.entry_id 1ZZ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ZZ9 _cell.length_a 111.87 _cell.length_b 111.87 _cell.length_c 153.16 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA,PQS tetrameric 4 author_and_software_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 PQS tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,F,G,J,K 1 1,2 C,H,I,L 2 1,3,4 C,H,I,L 3 1,5,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 223.74 111.87 0 3 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 111.87 111.87 0 5 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 111.87 111.87 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 138 A HIS 138 1_555 D FE FE2 . A FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc2 A OE2 GLU 142 A GLU 142 1_555 D FE FE2 . A FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc3 A NE2 HIS 180 A HIS 180 1_555 D FE FE2 . A FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc4 D FE FE2 . A FE2 199 1_555 J O HOH . A HOH 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc5 D FE FE2 . A FE2 199 1_555 J O HOH . A HOH 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc6 B NE2 HIS 138 B HIS 138 1_555 F FE FE2 . B FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.744 ? metalc ? metalc7 B OE1 GLU 142 B GLU 142 1_555 F FE FE2 . B FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc8 B NE2 HIS 180 B HIS 180 1_555 F FE FE2 . B FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc9 F FE FE2 . B FE2 199 1_555 K O HOH . B HOH 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc10 F FE FE2 . B FE2 199 1_555 K O HOH . B HOH 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.792 ? metalc ? metalc11 C NE2 HIS 138 C HIS 138 1_555 H FE FE2 . C FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? metalc ? metalc12 C OE2 GLU 142 C GLU 142 1_555 H FE FE2 . C FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc13 C NE2 HIS 180 C HIS 180 1_555 H FE FE2 . C FE2 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc14 H FE FE2 . C FE2 199 1_555 L O HOH . C HOH 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc15 H FE FE2 . C FE2 199 1_555 L O HOH . C HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? # _chem_comp.formula 'Fe 2' _chem_comp.formula_weight 55.845 _chem_comp.id FE2 _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ZZ9 _atom_sites.fract_transf_matrix[1][1] 0.008939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006529 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 FE2 A 1 199 199 FE2 FE2 . E 3 SO4 A 1 200 160 SO4 SO4 . F 2 FE2 B 1 199 199 FE2 FE2 . G 3 SO4 B 1 200 159 SO4 SO4 . H 2 FE2 C 1 199 199 FE2 FE2 . I 3 SO4 C 1 200 161 SO4 SO4 . J 4 HOH A 1 201 1 HOH HOH . J 4 HOH A 2 202 2 HOH HOH . J 4 HOH A 3 203 9 HOH HOH . J 4 HOH A 4 204 10 HOH HOH . J 4 HOH A 5 205 16 HOH HOH . J 4 HOH A 6 206 28 HOH HOH . J 4 HOH A 7 207 35 HOH HOH . J 4 HOH A 8 208 39 HOH HOH . J 4 HOH A 9 209 41 HOH HOH . J 4 HOH A 10 210 42 HOH HOH . J 4 HOH A 11 211 43 HOH HOH . J 4 HOH A 12 212 49 HOH HOH . J 4 HOH A 13 213 56 HOH HOH . J 4 HOH A 14 214 59 HOH HOH . J 4 HOH A 15 215 62 HOH HOH . J 4 HOH A 16 216 63 HOH HOH . J 4 HOH A 17 217 71 HOH HOH . J 4 HOH A 18 218 75 HOH HOH . J 4 HOH A 19 219 80 HOH HOH . J 4 HOH A 20 220 83 HOH HOH . J 4 HOH A 21 221 93 HOH HOH . J 4 HOH A 22 222 94 HOH HOH . J 4 HOH A 23 223 95 HOH HOH . J 4 HOH A 24 224 96 HOH HOH . J 4 HOH A 25 225 100 HOH HOH . J 4 HOH A 26 226 101 HOH HOH . J 4 HOH A 27 227 103 HOH HOH . J 4 HOH A 28 228 106 HOH HOH . J 4 HOH A 29 229 110 HOH HOH . J 4 HOH A 30 230 117 HOH HOH . J 4 HOH A 31 231 118 HOH HOH . J 4 HOH A 32 232 121 HOH HOH . J 4 HOH A 33 233 122 HOH HOH . J 4 HOH A 34 234 125 HOH HOH . K 4 HOH B 1 201 3 HOH HOH . K 4 HOH B 2 202 4 HOH HOH . K 4 HOH B 3 203 5 HOH HOH . K 4 HOH B 4 204 6 HOH HOH . K 4 HOH B 5 205 7 HOH HOH . K 4 HOH B 6 206 8 HOH HOH . K 4 HOH B 7 207 11 HOH HOH . K 4 HOH B 8 208 13 HOH HOH . K 4 HOH B 9 209 19 HOH HOH . K 4 HOH B 10 210 20 HOH HOH . K 4 HOH B 11 211 21 HOH HOH . K 4 HOH B 12 212 22 HOH HOH . K 4 HOH B 13 213 25 HOH HOH . K 4 HOH B 14 214 27 HOH HOH . K 4 HOH B 15 215 31 HOH HOH . K 4 HOH B 16 216 32 HOH HOH . K 4 HOH B 17 217 33 HOH HOH . K 4 HOH B 18 218 34 HOH HOH . K 4 HOH B 19 219 36 HOH HOH . K 4 HOH B 20 220 38 HOH HOH . K 4 HOH B 21 221 40 HOH HOH . K 4 HOH B 22 222 50 HOH HOH . K 4 HOH B 23 223 51 HOH HOH . K 4 HOH B 24 224 53 HOH HOH . K 4 HOH B 25 225 54 HOH HOH . K 4 HOH B 26 226 58 HOH HOH . K 4 HOH B 27 227 61 HOH HOH . K 4 HOH B 28 228 64 HOH HOH . K 4 HOH B 29 229 65 HOH HOH . K 4 HOH B 30 230 66 HOH HOH . K 4 HOH B 31 231 74 HOH HOH . K 4 HOH B 32 232 77 HOH HOH . K 4 HOH B 33 233 78 HOH HOH . K 4 HOH B 34 234 79 HOH HOH . K 4 HOH B 35 235 82 HOH HOH . K 4 HOH B 36 236 84 HOH HOH . K 4 HOH B 37 237 85 HOH HOH . K 4 HOH B 38 238 86 HOH HOH . K 4 HOH B 39 239 88 HOH HOH . K 4 HOH B 40 240 91 HOH HOH . K 4 HOH B 41 241 97 HOH HOH . K 4 HOH B 42 242 98 HOH HOH . K 4 HOH B 43 243 99 HOH HOH . K 4 HOH B 44 244 102 HOH HOH . K 4 HOH B 45 245 107 HOH HOH . K 4 HOH B 46 246 108 HOH HOH . K 4 HOH B 47 247 112 HOH HOH . K 4 HOH B 48 248 123 HOH HOH . K 4 HOH B 49 249 124 HOH HOH . L 4 HOH C 1 201 12 HOH HOH . L 4 HOH C 2 202 14 HOH HOH . L 4 HOH C 3 203 15 HOH HOH . L 4 HOH C 4 204 17 HOH HOH . L 4 HOH C 5 205 18 HOH HOH . L 4 HOH C 6 206 23 HOH HOH . L 4 HOH C 7 207 24 HOH HOH . L 4 HOH C 8 208 26 HOH HOH . L 4 HOH C 9 209 29 HOH HOH . L 4 HOH C 10 210 30 HOH HOH . L 4 HOH C 11 211 37 HOH HOH . L 4 HOH C 12 212 44 HOH HOH . L 4 HOH C 13 213 45 HOH HOH . L 4 HOH C 14 214 46 HOH HOH . L 4 HOH C 15 215 47 HOH HOH . L 4 HOH C 16 216 48 HOH HOH . L 4 HOH C 17 217 52 HOH HOH . L 4 HOH C 18 218 55 HOH HOH . L 4 HOH C 19 219 57 HOH HOH . L 4 HOH C 20 220 60 HOH HOH . L 4 HOH C 21 221 67 HOH HOH . L 4 HOH C 22 222 68 HOH HOH . L 4 HOH C 23 223 69 HOH HOH . L 4 HOH C 24 224 70 HOH HOH . L 4 HOH C 25 225 72 HOH HOH . L 4 HOH C 26 226 73 HOH HOH . L 4 HOH C 27 227 76 HOH HOH . L 4 HOH C 28 228 81 HOH HOH . L 4 HOH C 29 229 87 HOH HOH . L 4 HOH C 30 230 89 HOH HOH . L 4 HOH C 31 231 90 HOH HOH . L 4 HOH C 32 232 92 HOH HOH . L 4 HOH C 33 233 104 HOH HOH . L 4 HOH C 34 234 105 HOH HOH . L 4 HOH C 35 235 109 HOH HOH . L 4 HOH C 36 236 111 HOH HOH . L 4 HOH C 37 237 113 HOH HOH . L 4 HOH C 38 238 114 HOH HOH . L 4 HOH C 39 239 115 HOH HOH . L 4 HOH C 40 240 116 HOH HOH . L 4 HOH C 41 241 119 HOH HOH . L 4 HOH C 42 242 120 HOH HOH . L 4 HOH C 43 243 126 HOH HOH . L 4 HOH C 44 244 127 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE2 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 100.044 _atom_site.Cartn_y 52.456 _atom_site.Cartn_z 44.223 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 45.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE2 _atom_site.auth_seq_id 199 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #