data_1ZZB # _model_server_result.job_id Ea41taF6v17rHcTYjNbJnQ _model_server_result.datetime_utc '2024-11-25 08:26:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1zzb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1001}' # _entry.id 1ZZB # _exptl.entry_id 1ZZB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 140.075 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(S)-2-HYDROXYPROPYLPHOSPHONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ZZB _cell.length_a 86.24 _cell.length_b 86.24 _cell.length_c 220.15 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ZZB _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 9_765 -x+2,-x+y+1,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 129.36 74.686031 73.383333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 138 A HIS 138 1_555 C CO CO . A CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc2 A OE2 GLU 142 A GLU 142 1_555 C CO CO . A CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 A NE2 HIS 180 A HIS 180 1_555 C CO CO . A CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 C CO CO . A CO 199 1_555 D O14 S0H . A S0H 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc5 C CO CO . A CO 199 1_555 G O HOH . A HOH 1035 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc6 B NE2 HIS 138 B HIS 138 1_555 E CO CO . B CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc7 B OE1 GLU 142 B GLU 142 1_555 E CO CO . B CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc8 B NE2 HIS 180 B HIS 180 1_555 E CO CO . B CO 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc9 E CO CO . B CO 199 1_555 F O6 S0H . B S0H 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc10 E CO CO . B CO 199 1_555 F O15 S0H . B S0H 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? # _chem_comp.formula 'C3 H9 O4 P' _chem_comp.formula_weight 140.075 _chem_comp.id S0H _chem_comp.mon_nstd_flag . _chem_comp.name '(S)-2-HYDROXYPROPYLPHOSPHONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 C2 S0H sing 277 n n P1 O13 S0H sing 278 n n P1 O14 S0H doub 279 n n P1 O15 S0H sing 280 n n C2 C3 S0H sing 281 n n C2 H21 S0H sing 282 n n C2 H22 S0H sing 283 n n C3 O6 S0H sing 284 n n C3 C1 S0H sing 285 n n C3 H3 S0H sing 286 n n O6 HO6 S0H sing 287 n n C1 H11 S0H sing 288 n n C1 H12 S0H sing 289 n n C1 H13A S0H sing 290 n n O13 H13 S0H sing 291 n n O15 H15 S0H sing 292 n n # _atom_sites.entry_id 1ZZB _atom_sites.fract_transf_matrix[1][1] 0.011596 _atom_sites.fract_transf_matrix[1][2] 0.006695 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013389 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 199 199 CO CO . D 3 S0H A 1 1002 1002 S0H S0H . E 2 CO B 1 199 199 CO CO . F 3 S0H B 1 1001 1001 S0H S0H . G 4 HOH A 1 1003 1 HOH HOH . G 4 HOH A 2 1004 3 HOH HOH . G 4 HOH A 3 1005 6 HOH HOH . G 4 HOH A 4 1006 10 HOH HOH . G 4 HOH A 5 1007 11 HOH HOH . G 4 HOH A 6 1008 14 HOH HOH . G 4 HOH A 7 1009 17 HOH HOH . G 4 HOH A 8 1010 19 HOH HOH . G 4 HOH A 9 1011 20 HOH HOH . G 4 HOH A 10 1012 21 HOH HOH . G 4 HOH A 11 1013 22 HOH HOH . G 4 HOH A 12 1014 23 HOH HOH . G 4 HOH A 13 1015 24 HOH HOH . G 4 HOH A 14 1016 26 HOH HOH . G 4 HOH A 15 1017 30 HOH HOH . G 4 HOH A 16 1018 32 HOH HOH . G 4 HOH A 17 1019 35 HOH HOH . G 4 HOH A 18 1020 39 HOH HOH . G 4 HOH A 19 1021 40 HOH HOH . G 4 HOH A 20 1022 44 HOH HOH . G 4 HOH A 21 1023 47 HOH HOH . G 4 HOH A 22 1024 48 HOH HOH . G 4 HOH A 23 1025 49 HOH HOH . G 4 HOH A 24 1026 50 HOH HOH . G 4 HOH A 25 1027 51 HOH HOH . G 4 HOH A 26 1028 52 HOH HOH . G 4 HOH A 27 1029 53 HOH HOH . G 4 HOH A 28 1030 54 HOH HOH . G 4 HOH A 29 1031 59 HOH HOH . G 4 HOH A 30 1032 60 HOH HOH . G 4 HOH A 31 1033 61 HOH HOH . G 4 HOH A 32 1034 72 HOH HOH . G 4 HOH A 33 1035 73 HOH HOH . H 4 HOH B 1 1002 2 HOH HOH . H 4 HOH B 2 1003 4 HOH HOH . H 4 HOH B 3 1004 5 HOH HOH . H 4 HOH B 4 1005 7 HOH HOH . H 4 HOH B 5 1006 8 HOH HOH . H 4 HOH B 6 1007 9 HOH HOH . H 4 HOH B 7 1008 12 HOH HOH . H 4 HOH B 8 1009 13 HOH HOH . H 4 HOH B 9 1010 15 HOH HOH . H 4 HOH B 10 1011 16 HOH HOH . H 4 HOH B 11 1012 18 HOH HOH . H 4 HOH B 12 1013 25 HOH HOH . H 4 HOH B 13 1014 27 HOH HOH . H 4 HOH B 14 1015 28 HOH HOH . H 4 HOH B 15 1016 29 HOH HOH . H 4 HOH B 16 1017 31 HOH HOH . H 4 HOH B 17 1018 33 HOH HOH . H 4 HOH B 18 1019 34 HOH HOH . H 4 HOH B 19 1020 36 HOH HOH . H 4 HOH B 20 1021 37 HOH HOH . H 4 HOH B 21 1022 38 HOH HOH . H 4 HOH B 22 1023 41 HOH HOH . H 4 HOH B 23 1024 42 HOH HOH . H 4 HOH B 24 1025 43 HOH HOH . H 4 HOH B 25 1026 45 HOH HOH . H 4 HOH B 26 1027 46 HOH HOH . H 4 HOH B 27 1028 55 HOH HOH . H 4 HOH B 28 1029 56 HOH HOH . H 4 HOH B 29 1030 57 HOH HOH . H 4 HOH B 30 1031 58 HOH HOH . H 4 HOH B 31 1032 62 HOH HOH . H 4 HOH B 32 1033 63 HOH HOH . H 4 HOH B 33 1034 64 HOH HOH . H 4 HOH B 34 1035 65 HOH HOH . H 4 HOH B 35 1036 66 HOH HOH . H 4 HOH B 36 1037 67 HOH HOH . H 4 HOH B 37 1038 68 HOH HOH . H 4 HOH B 38 1039 69 HOH HOH . H 4 HOH B 39 1040 70 HOH HOH . H 4 HOH B 40 1041 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 S0H . . . F 3 83.346 24.933 26.639 1 49.18 ? P1 S0H 1001 B 1 HETATM 2 C C2 S0H . . . F 3 83.66 23.376 27.543 1 48.6 ? C2 S0H 1001 B 1 HETATM 3 C C3 S0H . . . F 3 84.39 23.643 28.867 1 48.68 ? C3 S0H 1001 B 1 HETATM 4 O O6 S0H . . . F 3 83.718 24.614 29.625 1 46.22 ? O6 S0H 1001 B 1 HETATM 5 C C1 S0H . . . F 3 84.39 22.72 29.468 1 48.71 ? C1 S0H 1001 B 1 HETATM 6 O O13 S0H . . . F 3 82.924 24.704 25.275 1 48.83 ? O13 S0H 1001 B 1 HETATM 7 O O14 S0H . . . F 3 84.61 25.826 26.708 1 47.98 ? O14 S0H 1001 B 1 HETATM 8 O O15 S0H . . . F 3 82.368 25.838 27.434 1 50.91 ? O15 S0H 1001 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #