data_20GS # _model_server_result.job_id pBpGvlZhvfu7imh8gxhBbg _model_server_result.datetime_utc '2024-12-18 01:42:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 20gs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":211}' # _entry.id 20GS # _exptl.entry_id 20GS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 774.157 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CIBACRON BLUE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.73 _cell.angle_gamma 90 _cell.entry_id 20GS _cell.length_a 78.176 _cell.length_b 90.69 _cell.length_c 68.755 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 20GS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C29 H20 Cl N7 O11 S3' _chem_comp.formula_weight 774.157 _chem_comp.id CBD _chem_comp.mon_nstd_flag . _chem_comp.name 'CIBACRON BLUE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 SA CBD sing 70 n n C1 C2 CBD doub 71 n y C1 C14 CBD sing 72 n y SA O1A CBD doub 73 n n SA O2A CBD doub 74 n n SA O3A CBD sing 75 n n O3A HOA3 CBD sing 76 n n C2 N2 CBD sing 77 n n C2 C3 CBD sing 78 n y N2 HN21 CBD sing 79 n n N2 HN22 CBD sing 80 n n C3 C4 CBD sing 81 n n C3 C12 CBD doub 82 n y C4 O4 CBD doub 83 n n C4 C5 CBD sing 84 n n C5 C6 CBD doub 85 n y C5 C10 CBD sing 86 n y C6 C7 CBD sing 87 n y C6 H6 CBD sing 88 n n C7 C8 CBD doub 89 n y C7 H7 CBD sing 90 n n C8 C9 CBD sing 91 n y C8 H8 CBD sing 92 n n C9 C10 CBD doub 93 n y C9 H9 CBD sing 94 n n C10 C11 CBD sing 95 n n C11 O11 CBD doub 96 n n C11 C12 CBD sing 97 n n C12 C13 CBD sing 98 n y C13 C14 CBD doub 99 n y C13 NB CBD sing 100 n n C14 H14 CBD sing 101 n n NB CB5 CBD sing 102 n n NB HNB CBD sing 103 n n CB1 SB CBD sing 104 n n CB1 CB2 CBD doub 105 n y CB1 CB6 CBD sing 106 n y SB O1B CBD doub 107 n n SB O2B CBD doub 108 n n SB O3B CBD sing 109 n n O3B HOB3 CBD sing 110 n n CB2 CB3 CBD sing 111 n y CB2 NC CBD sing 112 n n CB3 CB4 CBD doub 113 n y CB3 HB3 CBD sing 114 n n CB4 CB5 CBD sing 115 n y CB4 HB4 CBD sing 116 n n CB5 CB6 CBD doub 117 n y CB6 HB6 CBD sing 118 n n NC CC6 CBD sing 119 n n NC HNC CBD sing 120 n n NC1 CC2 CBD doub 121 n y NC1 CC6 CBD sing 122 n y CC2 CL CBD sing 123 n n CC2 NC3 CBD sing 124 n y NC3 CC4 CBD doub 125 n y CC4 NC5 CBD sing 126 n y CC4 ND CBD sing 127 n n NC5 CC6 CBD doub 128 n y ND CD2 CBD sing 129 n n ND HND CBD sing 130 n n CD1 SD CBD sing 131 n n CD1 CD2 CBD doub 132 n y CD1 CD6 CBD sing 133 n y SD O1D CBD doub 134 n n SD O2D CBD doub 135 n n SD O3D CBD sing 136 n n O3D HOD3 CBD sing 137 n n CD2 CD3 CBD sing 138 n y CD3 CD4 CBD doub 139 n y CD3 HD3 CBD sing 140 n n CD4 CD5 CBD sing 141 n y CD4 HD4 CBD sing 142 n n CD5 CD6 CBD doub 143 n y CD5 HD5 CBD sing 144 n n CD6 HD6 CBD sing 145 n n # _atom_sites.entry_id 20GS _atom_sites.fract_transf_matrix[1][1] 0.012792 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001736 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011027 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MES A 1 210 1 MES MES . D 3 CBD A 1 211 2 CBD CBD . E 2 MES B 1 210 1 MES MES . F 3 CBD B 1 211 2 CBD CBD . G 4 HOH A 1 212 2 HOH HOH . G 4 HOH A 2 213 3 HOH HOH . G 4 HOH A 3 214 6 HOH HOH . G 4 HOH A 4 215 8 HOH HOH . G 4 HOH A 5 216 10 HOH HOH . G 4 HOH A 6 217 12 HOH HOH . G 4 HOH A 7 218 14 HOH HOH . G 4 HOH A 8 219 17 HOH HOH . G 4 HOH A 9 220 19 HOH HOH . G 4 HOH A 10 221 24 HOH HOH . G 4 HOH A 11 222 26 HOH HOH . G 4 HOH A 12 223 27 HOH HOH . G 4 HOH A 13 224 28 HOH HOH . G 4 HOH A 14 225 29 HOH HOH . G 4 HOH A 15 226 30 HOH HOH . G 4 HOH A 16 227 31 HOH HOH . G 4 HOH A 17 228 32 HOH HOH . G 4 HOH A 18 229 34 HOH HOH . G 4 HOH A 19 230 37 HOH HOH . G 4 HOH A 20 231 40 HOH HOH . G 4 HOH A 21 232 41 HOH HOH . G 4 HOH A 22 233 42 HOH HOH . G 4 HOH A 23 234 44 HOH HOH . G 4 HOH A 24 235 47 HOH HOH . G 4 HOH A 25 236 51 HOH HOH . G 4 HOH A 26 237 55 HOH HOH . G 4 HOH A 27 238 56 HOH HOH . G 4 HOH A 28 239 61 HOH HOH . G 4 HOH A 29 240 65 HOH HOH . G 4 HOH A 30 241 66 HOH HOH . G 4 HOH A 31 242 67 HOH HOH . G 4 HOH A 32 243 68 HOH HOH . G 4 HOH A 33 244 73 HOH HOH . G 4 HOH A 34 245 74 HOH HOH . G 4 HOH A 35 246 76 HOH HOH . G 4 HOH A 36 247 78 HOH HOH . G 4 HOH A 37 248 79 HOH HOH . G 4 HOH A 38 249 80 HOH HOH . G 4 HOH A 39 250 82 HOH HOH . G 4 HOH A 40 251 83 HOH HOH . G 4 HOH A 41 252 85 HOH HOH . G 4 HOH A 42 253 86 HOH HOH . G 4 HOH A 43 254 87 HOH HOH . G 4 HOH A 44 255 93 HOH HOH . G 4 HOH A 45 256 94 HOH HOH . G 4 HOH A 46 257 96 HOH HOH . G 4 HOH A 47 258 97 HOH HOH . G 4 HOH A 48 259 98 HOH HOH . G 4 HOH A 49 260 99 HOH HOH . G 4 HOH A 50 261 101 HOH HOH . H 4 HOH B 1 212 1 HOH HOH . H 4 HOH B 2 213 4 HOH HOH . H 4 HOH B 3 214 5 HOH HOH . H 4 HOH B 4 215 7 HOH HOH . H 4 HOH B 5 216 9 HOH HOH . H 4 HOH B 6 217 11 HOH HOH . H 4 HOH B 7 218 13 HOH HOH . H 4 HOH B 8 219 15 HOH HOH . H 4 HOH B 9 220 16 HOH HOH . H 4 HOH B 10 221 18 HOH HOH . H 4 HOH B 11 222 20 HOH HOH . H 4 HOH B 12 223 21 HOH HOH . H 4 HOH B 13 224 22 HOH HOH . H 4 HOH B 14 225 23 HOH HOH . H 4 HOH B 15 226 25 HOH HOH . H 4 HOH B 16 227 33 HOH HOH . H 4 HOH B 17 228 35 HOH HOH . H 4 HOH B 18 229 36 HOH HOH . H 4 HOH B 19 230 38 HOH HOH . H 4 HOH B 20 231 39 HOH HOH . H 4 HOH B 21 232 43 HOH HOH . H 4 HOH B 22 233 45 HOH HOH . H 4 HOH B 23 234 46 HOH HOH . H 4 HOH B 24 235 48 HOH HOH . H 4 HOH B 25 236 49 HOH HOH . H 4 HOH B 26 237 50 HOH HOH . H 4 HOH B 27 238 52 HOH HOH . H 4 HOH B 28 239 53 HOH HOH . H 4 HOH B 29 240 54 HOH HOH . H 4 HOH B 30 241 57 HOH HOH . H 4 HOH B 31 242 58 HOH HOH . H 4 HOH B 32 243 59 HOH HOH . H 4 HOH B 33 244 60 HOH HOH . H 4 HOH B 34 245 62 HOH HOH . H 4 HOH B 35 246 63 HOH HOH . H 4 HOH B 36 247 64 HOH HOH . H 4 HOH B 37 248 69 HOH HOH . H 4 HOH B 38 249 70 HOH HOH . H 4 HOH B 39 250 71 HOH HOH . H 4 HOH B 40 251 72 HOH HOH . H 4 HOH B 41 252 75 HOH HOH . H 4 HOH B 42 253 77 HOH HOH . H 4 HOH B 43 254 81 HOH HOH . H 4 HOH B 44 255 84 HOH HOH . H 4 HOH B 45 256 88 HOH HOH . H 4 HOH B 46 257 89 HOH HOH . H 4 HOH B 47 258 90 HOH HOH . H 4 HOH B 48 259 91 HOH HOH . H 4 HOH B 49 260 92 HOH HOH . H 4 HOH B 50 261 95 HOH HOH . H 4 HOH B 51 262 100 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CBD . . . F 3 10.579 16.529 7.858 1 52.7 ? C1 CBD 211 B 1 HETATM 2 S SA CBD . . . F 3 11.199 15.493 9.117 1 60.52 ? SA CBD 211 B 1 HETATM 3 O O1A CBD . . . F 3 11.555 16.348 10.337 1 59.34 ? O1A CBD 211 B 1 HETATM 4 O O2A CBD . . . F 3 12.421 14.925 8.462 1 54.74 ? O2A CBD 211 B 1 HETATM 5 O O3A CBD . . . F 3 9.964 14.654 9.457 1 57.07 ? O3A CBD 211 B 1 HETATM 6 C C2 CBD . . . F 3 11.404 17.57 7.41 1 49.59 ? C2 CBD 211 B 1 HETATM 7 N N2 CBD . . . F 3 12.772 17.721 8.074 1 49.29 ? N2 CBD 211 B 1 HETATM 8 C C3 CBD . . . F 3 10.934 18.407 6.37 1 46.91 ? C3 CBD 211 B 1 HETATM 9 C C4 CBD . . . F 3 11.75 19.51 5.823 1 45.66 ? C4 CBD 211 B 1 HETATM 10 O O4 CBD . . . F 3 12.886 19.679 6.359 1 44.12 ? O4 CBD 211 B 1 HETATM 11 C C5 CBD . . . F 3 11.333 20.414 4.721 1 41.62 ? C5 CBD 211 B 1 HETATM 12 C C6 CBD . . . F 3 12.155 21.468 4.209 1 40.69 ? C6 CBD 211 B 1 HETATM 13 C C7 CBD . . . F 3 11.678 22.265 3.151 1 43.09 ? C7 CBD 211 B 1 HETATM 14 C C8 CBD . . . F 3 10.401 22.052 2.583 1 45.02 ? C8 CBD 211 B 1 HETATM 15 C C9 CBD . . . F 3 9.563 21.013 3.076 1 45.85 ? C9 CBD 211 B 1 HETATM 16 C C10 CBD . . . F 3 10.026 20.184 4.144 1 43.69 ? C10 CBD 211 B 1 HETATM 17 C C11 CBD . . . F 3 9.229 19.093 4.693 1 45.28 ? C11 CBD 211 B 1 HETATM 18 O O11 CBD . . . F 3 8.11 18.896 4.201 1 44.74 ? O11 CBD 211 B 1 HETATM 19 C C12 CBD . . . F 3 9.605 18.172 5.785 1 45.92 ? C12 CBD 211 B 1 HETATM 20 C C13 CBD . . . F 3 8.769 17.087 6.281 1 47.29 ? C13 CBD 211 B 1 HETATM 21 C C14 CBD . . . F 3 9.262 16.248 7.336 1 50.33 ? C14 CBD 211 B 1 HETATM 22 N NB CBD . . . F 3 7.412 16.806 5.723 1 46.37 ? NB CBD 211 B 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 22 #