data_251L # _model_server_result.job_id YHZiTOhUi3oV9rGdSW0ArQ _model_server_result.datetime_utc '2024-11-14 21:55:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 251l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":170}' # _entry.id 251L # _exptl.entry_id 251L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 251L _cell.length_a 61.12 _cell.length_b 61.12 _cell.length_c 96.36 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 251L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 251L _atom_sites.fract_transf_matrix[1][1] 0.016361 _atom_sites.fract_transf_matrix[1][2] 0.009446 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010378 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 HED A 1 170 170 HED HED . E 4 HOH A 1 171 171 HOH HOH . E 4 HOH A 2 172 172 HOH HOH . E 4 HOH A 3 174 174 HOH HOH . E 4 HOH A 4 175 175 HOH HOH . E 4 HOH A 5 176 176 HOH HOH . E 4 HOH A 6 177 177 HOH HOH . E 4 HOH A 7 179 179 HOH HOH . E 4 HOH A 8 180 180 HOH HOH . E 4 HOH A 9 181 181 HOH HOH . E 4 HOH A 10 182 182 HOH HOH . E 4 HOH A 11 183 183 HOH HOH . E 4 HOH A 12 185 185 HOH HOH . E 4 HOH A 13 186 186 HOH HOH . E 4 HOH A 14 188 188 HOH HOH . E 4 HOH A 15 189 189 HOH HOH . E 4 HOH A 16 190 190 HOH HOH . E 4 HOH A 17 191 191 HOH HOH . E 4 HOH A 18 193 193 HOH HOH . E 4 HOH A 19 194 194 HOH HOH . E 4 HOH A 20 195 195 HOH HOH . E 4 HOH A 21 196 196 HOH HOH . E 4 HOH A 22 197 197 HOH HOH . E 4 HOH A 23 198 198 HOH HOH . E 4 HOH A 24 201 201 HOH HOH . E 4 HOH A 25 202 202 HOH HOH . E 4 HOH A 26 203 203 HOH HOH . E 4 HOH A 27 204 204 HOH HOH . E 4 HOH A 28 206 206 HOH HOH . E 4 HOH A 29 208 208 HOH HOH . E 4 HOH A 30 209 209 HOH HOH . E 4 HOH A 31 210 210 HOH HOH . E 4 HOH A 32 211 211 HOH HOH . E 4 HOH A 33 213 213 HOH HOH . E 4 HOH A 34 214 214 HOH HOH . E 4 HOH A 35 215 215 HOH HOH . E 4 HOH A 36 216 216 HOH HOH . E 4 HOH A 37 217 217 HOH HOH . E 4 HOH A 38 218 218 HOH HOH . E 4 HOH A 39 219 219 HOH HOH . E 4 HOH A 40 220 220 HOH HOH . E 4 HOH A 41 221 221 HOH HOH . E 4 HOH A 42 223 223 HOH HOH . E 4 HOH A 43 224 224 HOH HOH . E 4 HOH A 44 225 225 HOH HOH . E 4 HOH A 45 226 226 HOH HOH . E 4 HOH A 46 227 227 HOH HOH . E 4 HOH A 47 230 230 HOH HOH . E 4 HOH A 48 231 231 HOH HOH . E 4 HOH A 49 234 234 HOH HOH . E 4 HOH A 50 235 235 HOH HOH . E 4 HOH A 51 236 236 HOH HOH . E 4 HOH A 52 237 237 HOH HOH . E 4 HOH A 53 238 238 HOH HOH . E 4 HOH A 54 240 240 HOH HOH . E 4 HOH A 55 242 242 HOH HOH . E 4 HOH A 56 244 244 HOH HOH . E 4 HOH A 57 245 245 HOH HOH . E 4 HOH A 58 246 246 HOH HOH . E 4 HOH A 59 249 249 HOH HOH . E 4 HOH A 60 250 250 HOH HOH . E 4 HOH A 61 251 251 HOH HOH . E 4 HOH A 62 256 256 HOH HOH . E 4 HOH A 63 257 257 HOH HOH . E 4 HOH A 64 259 259 HOH HOH . E 4 HOH A 65 262 262 HOH HOH . E 4 HOH A 66 263 263 HOH HOH . E 4 HOH A 67 266 266 HOH HOH . E 4 HOH A 68 267 267 HOH HOH . E 4 HOH A 69 268 268 HOH HOH . E 4 HOH A 70 270 270 HOH HOH . E 4 HOH A 71 271 271 HOH HOH . E 4 HOH A 72 273 273 HOH HOH . E 4 HOH A 73 274 274 HOH HOH . E 4 HOH A 74 275 275 HOH HOH . E 4 HOH A 75 277 277 HOH HOH . E 4 HOH A 76 278 278 HOH HOH . E 4 HOH A 77 279 279 HOH HOH . E 4 HOH A 78 280 280 HOH HOH . E 4 HOH A 79 281 281 HOH HOH . E 4 HOH A 80 282 282 HOH HOH . E 4 HOH A 81 283 283 HOH HOH . E 4 HOH A 82 285 285 HOH HOH . E 4 HOH A 83 286 286 HOH HOH . E 4 HOH A 84 288 288 HOH HOH . E 4 HOH A 85 289 289 HOH HOH . E 4 HOH A 86 291 291 HOH HOH . E 4 HOH A 87 293 293 HOH HOH . E 4 HOH A 88 294 294 HOH HOH . E 4 HOH A 89 295 295 HOH HOH . E 4 HOH A 90 296 296 HOH HOH . E 4 HOH A 91 297 297 HOH HOH . E 4 HOH A 92 298 298 HOH HOH . E 4 HOH A 93 299 299 HOH HOH . E 4 HOH A 94 300 300 HOH HOH . E 4 HOH A 95 302 302 HOH HOH . E 4 HOH A 96 303 303 HOH HOH . E 4 HOH A 97 308 308 HOH HOH . E 4 HOH A 98 309 309 HOH HOH . E 4 HOH A 99 312 312 HOH HOH . E 4 HOH A 100 314 314 HOH HOH . E 4 HOH A 101 315 315 HOH HOH . E 4 HOH A 102 317 317 HOH HOH . E 4 HOH A 103 318 318 HOH HOH . E 4 HOH A 104 319 319 HOH HOH . E 4 HOH A 105 320 320 HOH HOH . E 4 HOH A 106 321 321 HOH HOH . E 4 HOH A 107 322 322 HOH HOH . E 4 HOH A 108 323 323 HOH HOH . E 4 HOH A 109 324 324 HOH HOH . E 4 HOH A 110 325 325 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 3 31.724 -0.027 14.865 1 100 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . D 3 33.118 -0.313 14.856 1 35.82 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . D 3 30.952 -1.332 14.603 1 65.64 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . D 3 32.057 -2.463 13.746 1 100 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . D 3 32.831 -1.282 12.255 1 100 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . D 3 34.376 -2.075 11.726 1 100 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . D 3 34.236 -3.006 10.493 1 100 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . D 3 34.34 -4.365 10.894 1 100 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 8 #