data_252L # _model_server_result.job_id Kbgjd8cFCMQO2ZciyVEXoA _model_server_result.datetime_utc '2024-10-16 10:35:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 252l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":170}' # _entry.id 252L # _exptl.entry_id 252L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 252L _cell.length_a 60.8 _cell.length_b 60.8 _cell.length_c 97.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 252L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 252L _atom_sites.fract_transf_matrix[1][1] 0.016447 _atom_sites.fract_transf_matrix[1][2] 0.009496 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 3 HED A 1 170 170 HED HED . D 4 HOH A 1 171 171 HOH HOH . D 4 HOH A 2 172 172 HOH HOH . D 4 HOH A 3 174 174 HOH HOH . D 4 HOH A 4 175 175 HOH HOH . D 4 HOH A 5 177 177 HOH HOH . D 4 HOH A 6 178 178 HOH HOH . D 4 HOH A 7 179 179 HOH HOH . D 4 HOH A 8 180 180 HOH HOH . D 4 HOH A 9 181 181 HOH HOH . D 4 HOH A 10 182 182 HOH HOH . D 4 HOH A 11 183 183 HOH HOH . D 4 HOH A 12 185 185 HOH HOH . D 4 HOH A 13 186 186 HOH HOH . D 4 HOH A 14 187 187 HOH HOH . D 4 HOH A 15 188 188 HOH HOH . D 4 HOH A 16 189 189 HOH HOH . D 4 HOH A 17 190 190 HOH HOH . D 4 HOH A 18 191 191 HOH HOH . D 4 HOH A 19 192 192 HOH HOH . D 4 HOH A 20 193 193 HOH HOH . D 4 HOH A 21 194 194 HOH HOH . D 4 HOH A 22 195 195 HOH HOH . D 4 HOH A 23 196 196 HOH HOH . D 4 HOH A 24 197 197 HOH HOH . D 4 HOH A 25 200 200 HOH HOH . D 4 HOH A 26 201 201 HOH HOH . D 4 HOH A 27 202 202 HOH HOH . D 4 HOH A 28 203 203 HOH HOH . D 4 HOH A 29 204 204 HOH HOH . D 4 HOH A 30 208 208 HOH HOH . D 4 HOH A 31 209 209 HOH HOH . D 4 HOH A 32 210 210 HOH HOH . D 4 HOH A 33 211 211 HOH HOH . D 4 HOH A 34 213 213 HOH HOH . D 4 HOH A 35 214 214 HOH HOH . D 4 HOH A 36 215 215 HOH HOH . D 4 HOH A 37 216 216 HOH HOH . D 4 HOH A 38 217 217 HOH HOH . D 4 HOH A 39 218 218 HOH HOH . D 4 HOH A 40 219 219 HOH HOH . D 4 HOH A 41 221 221 HOH HOH . D 4 HOH A 42 222 222 HOH HOH . D 4 HOH A 43 223 223 HOH HOH . D 4 HOH A 44 224 224 HOH HOH . D 4 HOH A 45 225 225 HOH HOH . D 4 HOH A 46 226 226 HOH HOH . D 4 HOH A 47 227 227 HOH HOH . D 4 HOH A 48 228 228 HOH HOH . D 4 HOH A 49 229 229 HOH HOH . D 4 HOH A 50 231 231 HOH HOH . D 4 HOH A 51 235 235 HOH HOH . D 4 HOH A 52 236 236 HOH HOH . D 4 HOH A 53 237 237 HOH HOH . D 4 HOH A 54 238 238 HOH HOH . D 4 HOH A 55 239 239 HOH HOH . D 4 HOH A 56 240 240 HOH HOH . D 4 HOH A 57 242 242 HOH HOH . D 4 HOH A 58 244 244 HOH HOH . D 4 HOH A 59 245 245 HOH HOH . D 4 HOH A 60 247 247 HOH HOH . D 4 HOH A 61 248 248 HOH HOH . D 4 HOH A 62 249 249 HOH HOH . D 4 HOH A 63 251 251 HOH HOH . D 4 HOH A 64 253 253 HOH HOH . D 4 HOH A 65 256 256 HOH HOH . D 4 HOH A 66 257 257 HOH HOH . D 4 HOH A 67 259 259 HOH HOH . D 4 HOH A 68 260 260 HOH HOH . D 4 HOH A 69 261 261 HOH HOH . D 4 HOH A 70 266 266 HOH HOH . D 4 HOH A 71 269 269 HOH HOH . D 4 HOH A 72 270 270 HOH HOH . D 4 HOH A 73 271 271 HOH HOH . D 4 HOH A 74 273 273 HOH HOH . D 4 HOH A 75 274 274 HOH HOH . D 4 HOH A 76 275 275 HOH HOH . D 4 HOH A 77 277 277 HOH HOH . D 4 HOH A 78 278 278 HOH HOH . D 4 HOH A 79 281 281 HOH HOH . D 4 HOH A 80 282 282 HOH HOH . D 4 HOH A 81 283 283 HOH HOH . D 4 HOH A 82 284 284 HOH HOH . D 4 HOH A 83 285 285 HOH HOH . D 4 HOH A 84 288 288 HOH HOH . D 4 HOH A 85 289 289 HOH HOH . D 4 HOH A 86 292 292 HOH HOH . D 4 HOH A 87 293 293 HOH HOH . D 4 HOH A 88 294 294 HOH HOH . D 4 HOH A 89 295 295 HOH HOH . D 4 HOH A 90 296 296 HOH HOH . D 4 HOH A 91 299 299 HOH HOH . D 4 HOH A 92 301 301 HOH HOH . D 4 HOH A 93 302 302 HOH HOH . D 4 HOH A 94 303 303 HOH HOH . D 4 HOH A 95 304 304 HOH HOH . D 4 HOH A 96 307 307 HOH HOH . D 4 HOH A 97 308 308 HOH HOH . D 4 HOH A 98 311 311 HOH HOH . D 4 HOH A 99 314 314 HOH HOH . D 4 HOH A 100 317 317 HOH HOH . D 4 HOH A 101 401 401 HOH HOH . D 4 HOH A 102 402 402 HOH HOH . D 4 HOH A 103 403 403 HOH HOH . D 4 HOH A 104 404 404 HOH HOH . D 4 HOH A 105 405 405 HOH HOH . D 4 HOH A 106 406 406 HOH HOH . D 4 HOH A 107 407 407 HOH HOH . D 4 HOH A 108 408 408 HOH HOH . D 4 HOH A 109 409 409 HOH HOH . D 4 HOH A 110 410 410 HOH HOH . D 4 HOH A 111 411 411 HOH HOH . D 4 HOH A 112 412 412 HOH HOH . D 4 HOH A 113 413 413 HOH HOH . D 4 HOH A 114 414 414 HOH HOH . D 4 HOH A 115 415 415 HOH HOH . D 4 HOH A 116 416 416 HOH HOH . D 4 HOH A 117 417 417 HOH HOH . D 4 HOH A 118 418 418 HOH HOH . D 4 HOH A 119 419 419 HOH HOH . D 4 HOH A 120 420 420 HOH HOH . D 4 HOH A 121 421 421 HOH HOH . D 4 HOH A 122 422 422 HOH HOH . D 4 HOH A 123 423 423 HOH HOH . D 4 HOH A 124 424 424 HOH HOH . D 4 HOH A 125 425 425 HOH HOH . D 4 HOH A 126 426 426 HOH HOH . D 4 HOH A 127 427 427 HOH HOH . D 4 HOH A 128 428 428 HOH HOH . D 4 HOH A 129 429 429 HOH HOH . D 4 HOH A 130 430 430 HOH HOH . D 4 HOH A 131 431 431 HOH HOH . D 4 HOH A 132 432 432 HOH HOH . D 4 HOH A 133 433 433 HOH HOH . D 4 HOH A 134 434 434 HOH HOH . D 4 HOH A 135 435 435 HOH HOH . D 4 HOH A 136 436 436 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . C 3 31.682 -1.226 15.021 1 24.57 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . C 3 32.836 -0.451 15.354 1 34.56 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . C 3 31.819 -1.781 13.617 1 80.54 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . C 3 33.49 -1.487 13.015 1 41.39 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . C 3 33.295 -1.13 11.003 1 53.21 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . C 3 32.737 -2.7 10.299 1 37.81 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . C 3 33.873 -3.384 9.539 1 50.97 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . C 3 34.593 -2.349 8.91 1 27.24 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #