data_284D # _model_server_result.job_id 4mUe4v3pPLC5MlqTVOvGXA _model_server_result.datetime_utc '2025-03-05 20:14:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 284d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":29}' # _entry.id 284D # _exptl.entry_id 284D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 137.327 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BARIUM ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 284D _cell.length_a 22.844 _cell.length_b 27.676 _cell.length_c 55.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 284D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A P DA 1 A DA 1 1_555 A O3' DC 8 A DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.603 ? covale ? covale2 B P DA 1 B DA 11 1_555 B O3' DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.641 ? metalc ? metalc1 A O2 DT 2 A DT 2 1_555 C NA NA . A NA 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc2 A O2 DT 6 A DT 6 1_555 C NA NA . A NA 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc3 C NA NA . A NA 19 1_555 O O HOH . A HOH 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc4 C NA NA . A NA 19 1_555 B O2 DT 2 B DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? metalc ? metalc5 C NA NA . A NA 19 1_555 B O2 DT 6 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? metalc ? metalc6 C NA NA . A NA 19 1_555 P O HOH . B HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? hydrog WATSON-CRICK hydrog1 A N1 DA 1 A DA 1 1_555 B N3 DT 2 B DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N6 DA 1 A DA 1 1_555 B O4 DT 2 B DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N3 DT 2 A DT 2 1_555 B N1 DA 1 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O4 DT 2 A DT 2 1_555 B N6 DA 1 B DA 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N1 DA 5 A DA 5 1_555 B N3 DT 6 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N6 DA 5 A DA 5 1_555 B O4 DT 6 B DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DT 6 A DT 6 1_555 B N1 DA 5 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O4 DT 6 A DT 6 1_555 B N6 DA 5 B DA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ba 2' _chem_comp.formula_weight 137.327 _chem_comp.id BA _chem_comp.mon_nstd_flag . _chem_comp.name 'BARIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 284D _atom_sites.fract_transf_matrix[1][1] 0.043775 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 19 19 NA NA . D 3 BA A 1 28 28 BA BA . E 3 BA A 1 29 29 BA BA . F 3 BA A 1 30 30 BA BA . G 3 BA B 1 20 20 BA BA . H 3 BA B 1 21 21 BA BA . I 3 BA B 1 22 22 BA BA . J 3 BA B 1 23 23 BA BA . K 3 BA B 1 24 24 BA BA . L 3 BA B 1 25 25 BA BA . M 3 BA B 1 26 26 BA BA . N 3 BA B 1 27 27 BA BA . O 4 HOH A 1 31 31 HOH HOH . O 4 HOH A 2 34 34 HOH HOH . O 4 HOH A 3 39 39 HOH HOH . O 4 HOH A 4 47 47 HOH HOH . O 4 HOH A 5 50 50 HOH HOH . O 4 HOH A 6 54 54 HOH HOH . O 4 HOH A 7 57 57 HOH HOH . O 4 HOH A 8 58 58 HOH HOH . O 4 HOH A 9 60 60 HOH HOH . O 4 HOH A 10 62 62 HOH HOH . O 4 HOH A 11 64 64 HOH HOH . O 4 HOH A 12 65 65 HOH HOH . O 4 HOH A 13 66 66 HOH HOH . O 4 HOH A 14 67 67 HOH HOH . O 4 HOH A 15 76 76 HOH HOH . O 4 HOH A 16 77 77 HOH HOH . O 4 HOH A 17 78 78 HOH HOH . O 4 HOH A 18 84 84 HOH HOH . O 4 HOH A 19 85 85 HOH HOH . O 4 HOH A 20 88 88 HOH HOH . O 4 HOH A 21 89 89 HOH HOH . O 4 HOH A 22 90 90 HOH HOH . O 4 HOH A 23 107 107 HOH HOH . O 4 HOH A 24 128 128 HOH HOH . O 4 HOH A 25 130 130 HOH HOH . O 4 HOH A 26 134 134 HOH HOH . O 4 HOH A 27 135 135 HOH HOH . P 4 HOH B 1 32 32 HOH HOH . P 4 HOH B 2 33 33 HOH HOH . P 4 HOH B 3 35 35 HOH HOH . P 4 HOH B 4 36 36 HOH HOH . P 4 HOH B 5 37 37 HOH HOH . P 4 HOH B 6 38 38 HOH HOH . P 4 HOH B 7 40 40 HOH HOH . P 4 HOH B 8 41 41 HOH HOH . P 4 HOH B 9 42 42 HOH HOH . P 4 HOH B 10 43 43 HOH HOH . P 4 HOH B 11 44 44 HOH HOH . P 4 HOH B 12 45 45 HOH HOH . P 4 HOH B 13 46 46 HOH HOH . P 4 HOH B 14 48 48 HOH HOH . P 4 HOH B 15 49 49 HOH HOH . P 4 HOH B 16 51 51 HOH HOH . P 4 HOH B 17 52 52 HOH HOH . P 4 HOH B 18 53 53 HOH HOH . P 4 HOH B 19 55 55 HOH HOH . P 4 HOH B 20 56 56 HOH HOH . P 4 HOH B 21 59 59 HOH HOH . P 4 HOH B 22 61 61 HOH HOH . P 4 HOH B 23 63 63 HOH HOH . P 4 HOH B 24 68 68 HOH HOH . P 4 HOH B 25 69 69 HOH HOH . P 4 HOH B 26 70 70 HOH HOH . P 4 HOH B 27 71 71 HOH HOH . P 4 HOH B 28 72 72 HOH HOH . P 4 HOH B 29 73 73 HOH HOH . P 4 HOH B 30 74 74 HOH HOH . P 4 HOH B 31 75 75 HOH HOH . P 4 HOH B 32 79 79 HOH HOH . P 4 HOH B 33 80 80 HOH HOH . P 4 HOH B 34 81 81 HOH HOH . P 4 HOH B 35 82 82 HOH HOH . P 4 HOH B 36 83 83 HOH HOH . P 4 HOH B 37 86 86 HOH HOH . P 4 HOH B 38 87 87 HOH HOH . P 4 HOH B 39 91 91 HOH HOH . P 4 HOH B 40 92 92 HOH HOH . P 4 HOH B 41 93 93 HOH HOH . P 4 HOH B 42 94 94 HOH HOH . P 4 HOH B 43 95 95 HOH HOH . P 4 HOH B 44 96 96 HOH HOH . P 4 HOH B 45 97 97 HOH HOH . P 4 HOH B 46 98 98 HOH HOH . P 4 HOH B 47 99 99 HOH HOH . P 4 HOH B 48 100 100 HOH HOH . P 4 HOH B 49 101 101 HOH HOH . P 4 HOH B 50 102 102 HOH HOH . P 4 HOH B 51 103 103 HOH HOH . P 4 HOH B 52 104 104 HOH HOH . P 4 HOH B 53 105 105 HOH HOH . P 4 HOH B 54 106 106 HOH HOH . P 4 HOH B 55 108 108 HOH HOH . P 4 HOH B 56 109 109 HOH HOH . P 4 HOH B 57 110 110 HOH HOH . P 4 HOH B 58 111 111 HOH HOH . P 4 HOH B 59 112 112 HOH HOH . P 4 HOH B 60 113 113 HOH HOH . P 4 HOH B 61 114 114 HOH HOH . P 4 HOH B 62 115 115 HOH HOH . P 4 HOH B 63 116 116 HOH HOH . P 4 HOH B 64 117 117 HOH HOH . P 4 HOH B 65 118 118 HOH HOH . P 4 HOH B 66 119 119 HOH HOH . P 4 HOH B 67 120 120 HOH HOH . P 4 HOH B 68 121 121 HOH HOH . P 4 HOH B 69 122 122 HOH HOH . P 4 HOH B 70 123 123 HOH HOH . P 4 HOH B 71 124 124 HOH HOH . P 4 HOH B 72 125 125 HOH HOH . P 4 HOH B 73 126 126 HOH HOH . P 4 HOH B 74 127 127 HOH HOH . P 4 HOH B 75 129 129 HOH HOH . P 4 HOH B 76 131 131 HOH HOH . P 4 HOH B 77 132 132 HOH HOH . P 4 HOH B 78 133 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BA _atom_site.label_atom_id BA _atom_site.label_comp_id BA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.983 _atom_site.Cartn_y 13.768 _atom_site.Cartn_z 12.013 _atom_site.occupancy 0.49 _atom_site.B_iso_or_equiv 21.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BA _atom_site.auth_comp_id BA _atom_site.auth_seq_id 29 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #