data_2A0C # _model_server_result.job_id LFmtZDGkdPObz-tvgALnrQ _model_server_result.datetime_utc '2025-02-05 08:50:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a0c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":500}' # _entry.id 2A0C # _exptl.entry_id 2A0C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 370.449 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{[(2-{[(1R)-1-(HYDROXYMETHYL)PROPYL]AMINO}-9-ISOPROPYL-9H-PURIN-6-YL)AMINO]METHYL}PHENOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2A0C _cell.length_a 53.242 _cell.length_b 70.945 _cell.length_c 71.869 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A0C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H26 N6 O2' _chem_comp.formula_weight 370.449 _chem_comp.id CK9 _chem_comp.mon_nstd_flag . _chem_comp.name 2-{[(2-{[(1R)-1-(HYDROXYMETHYL)PROPYL]AMINO}-9-ISOPROPYL-9H-PURIN-6-YL)AMINO]METHYL}PHENOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'OLOMOUCINE II' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O27 C24 CK9 sing 70 n n O27 H27 CK9 sing 71 n n C24 C23 CK9 doub 72 n y C24 C19 CK9 sing 73 n y C23 C22 CK9 sing 74 n y C23 H23 CK9 sing 75 n n C22 C21 CK9 doub 76 n y C22 H22 CK9 sing 77 n n C21 C20 CK9 sing 78 n y C21 H21 CK9 sing 79 n n C20 C19 CK9 doub 80 n y C20 H20 CK9 sing 81 n n C19 C18 CK9 sing 82 n n C18 N17 CK9 sing 83 n n C18 H181 CK9 sing 84 n n C18 H182 CK9 sing 85 n n N17 C4 CK9 sing 86 n n N17 H17 CK9 sing 87 n n C4 C5 CK9 sing 88 n y C4 N1 CK9 doub 89 n y C5 N9 CK9 sing 90 n y C5 C6 CK9 doub 91 n y N9 C8 CK9 doub 92 n y C8 N7 CK9 sing 93 n y C8 H8 CK9 sing 94 n n C6 N7 CK9 sing 95 n y C6 N3 CK9 sing 96 n y N7 C10 CK9 sing 97 n n C10 C12 CK9 sing 98 n n C10 C11 CK9 sing 99 n n C10 H10 CK9 sing 100 n n C12 H121 CK9 sing 101 n n C12 H122 CK9 sing 102 n n C12 H123 CK9 sing 103 n n C11 H111 CK9 sing 104 n n C11 H112 CK9 sing 105 n n C11 H113 CK9 sing 106 n n N3 C2 CK9 doub 107 n y C2 N1 CK9 sing 108 n y C2 N13 CK9 sing 109 n n N13 C14 CK9 sing 110 n n N13 H13 CK9 sing 111 n n C14 C25 CK9 sing 112 n n C14 C15 CK9 sing 113 n n C14 H14 CK9 sing 114 n n C25 C26 CK9 sing 115 n n C25 H251 CK9 sing 116 n n C25 H252 CK9 sing 117 n n C26 H261 CK9 sing 118 n n C26 H262 CK9 sing 119 n n C26 H263 CK9 sing 120 n n C15 O16 CK9 sing 121 n n C15 H151 CK9 sing 122 n n C15 H152 CK9 sing 123 n n O16 H16 CK9 sing 124 n n # _atom_sites.entry_id 2A0C _atom_sites.fract_transf_matrix[1][1] 0.018782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014095 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013914 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CK9 X 1 500 500 CK9 CK9 . C 3 HOH X 1 501 1 HOH HOH . C 3 HOH X 2 502 2 HOH HOH . C 3 HOH X 3 503 3 HOH HOH . C 3 HOH X 4 504 4 HOH HOH . C 3 HOH X 5 505 5 HOH HOH . C 3 HOH X 6 506 6 HOH HOH . C 3 HOH X 7 507 7 HOH HOH . C 3 HOH X 8 508 8 HOH HOH . C 3 HOH X 9 509 9 HOH HOH . C 3 HOH X 10 510 10 HOH HOH . C 3 HOH X 11 511 11 HOH HOH . C 3 HOH X 12 512 12 HOH HOH . C 3 HOH X 13 513 13 HOH HOH . C 3 HOH X 14 514 14 HOH HOH . C 3 HOH X 15 515 15 HOH HOH . C 3 HOH X 16 516 16 HOH HOH . C 3 HOH X 17 517 17 HOH HOH . C 3 HOH X 18 518 18 HOH HOH . C 3 HOH X 19 519 19 HOH HOH . C 3 HOH X 20 520 20 HOH HOH . C 3 HOH X 21 521 21 HOH HOH . C 3 HOH X 22 522 22 HOH HOH . C 3 HOH X 23 523 23 HOH HOH . C 3 HOH X 24 524 24 HOH HOH . C 3 HOH X 25 525 25 HOH HOH . C 3 HOH X 26 526 26 HOH HOH . C 3 HOH X 27 527 27 HOH HOH . C 3 HOH X 28 528 28 HOH HOH . C 3 HOH X 29 529 29 HOH HOH . C 3 HOH X 30 530 30 HOH HOH . C 3 HOH X 31 531 31 HOH HOH . C 3 HOH X 32 532 32 HOH HOH . C 3 HOH X 33 533 33 HOH HOH . C 3 HOH X 34 534 34 HOH HOH . C 3 HOH X 35 535 35 HOH HOH . C 3 HOH X 36 536 36 HOH HOH . C 3 HOH X 37 537 37 HOH HOH . C 3 HOH X 38 538 38 HOH HOH . C 3 HOH X 39 539 39 HOH HOH . C 3 HOH X 40 540 40 HOH HOH . C 3 HOH X 41 541 41 HOH HOH . C 3 HOH X 42 542 42 HOH HOH . C 3 HOH X 43 543 43 HOH HOH . C 3 HOH X 44 544 44 HOH HOH . C 3 HOH X 45 545 45 HOH HOH . C 3 HOH X 46 546 46 HOH HOH . C 3 HOH X 47 547 47 HOH HOH . C 3 HOH X 48 548 48 HOH HOH . C 3 HOH X 49 549 49 HOH HOH . C 3 HOH X 50 550 50 HOH HOH . C 3 HOH X 51 551 51 HOH HOH . C 3 HOH X 52 552 52 HOH HOH . C 3 HOH X 53 553 53 HOH HOH . C 3 HOH X 54 554 54 HOH HOH . C 3 HOH X 55 555 55 HOH HOH . C 3 HOH X 56 556 56 HOH HOH . C 3 HOH X 57 557 57 HOH HOH . C 3 HOH X 58 558 58 HOH HOH . C 3 HOH X 59 559 59 HOH HOH . C 3 HOH X 60 560 60 HOH HOH . C 3 HOH X 61 561 61 HOH HOH . C 3 HOH X 62 562 62 HOH HOH . C 3 HOH X 63 563 63 HOH HOH . C 3 HOH X 64 564 64 HOH HOH . C 3 HOH X 65 565 65 HOH HOH . C 3 HOH X 66 566 66 HOH HOH . C 3 HOH X 67 567 67 HOH HOH . C 3 HOH X 68 568 68 HOH HOH . C 3 HOH X 69 569 69 HOH HOH . C 3 HOH X 70 570 70 HOH HOH . C 3 HOH X 71 571 71 HOH HOH . C 3 HOH X 72 572 72 HOH HOH . C 3 HOH X 73 573 73 HOH HOH . C 3 HOH X 74 574 74 HOH HOH . C 3 HOH X 75 575 75 HOH HOH . C 3 HOH X 76 576 76 HOH HOH . C 3 HOH X 77 577 77 HOH HOH . C 3 HOH X 78 578 78 HOH HOH . C 3 HOH X 79 579 79 HOH HOH . C 3 HOH X 80 580 80 HOH HOH . C 3 HOH X 81 581 81 HOH HOH . C 3 HOH X 82 582 82 HOH HOH . C 3 HOH X 83 583 83 HOH HOH . C 3 HOH X 84 584 84 HOH HOH . C 3 HOH X 85 585 85 HOH HOH . C 3 HOH X 86 586 86 HOH HOH . C 3 HOH X 87 587 87 HOH HOH . C 3 HOH X 88 588 88 HOH HOH . C 3 HOH X 89 589 89 HOH HOH . C 3 HOH X 90 590 90 HOH HOH . C 3 HOH X 91 591 91 HOH HOH . C 3 HOH X 92 592 92 HOH HOH . C 3 HOH X 93 593 93 HOH HOH . C 3 HOH X 94 594 94 HOH HOH . C 3 HOH X 95 595 95 HOH HOH . C 3 HOH X 96 596 96 HOH HOH . C 3 HOH X 97 597 97 HOH HOH . C 3 HOH X 98 598 98 HOH HOH . C 3 HOH X 99 599 99 HOH HOH . C 3 HOH X 100 600 100 HOH HOH . C 3 HOH X 101 601 101 HOH HOH . C 3 HOH X 102 602 102 HOH HOH . C 3 HOH X 103 603 103 HOH HOH . C 3 HOH X 104 604 104 HOH HOH . C 3 HOH X 105 605 105 HOH HOH . C 3 HOH X 106 606 106 HOH HOH . C 3 HOH X 107 607 107 HOH HOH . C 3 HOH X 108 608 108 HOH HOH . C 3 HOH X 109 609 109 HOH HOH . C 3 HOH X 110 610 110 HOH HOH . C 3 HOH X 111 611 111 HOH HOH . C 3 HOH X 112 612 112 HOH HOH . C 3 HOH X 113 613 113 HOH HOH . C 3 HOH X 114 614 114 HOH HOH . C 3 HOH X 115 615 115 HOH HOH . C 3 HOH X 116 616 116 HOH HOH . C 3 HOH X 117 617 117 HOH HOH . C 3 HOH X 118 618 118 HOH HOH . C 3 HOH X 119 619 119 HOH HOH . C 3 HOH X 120 620 120 HOH HOH . C 3 HOH X 121 621 121 HOH HOH . C 3 HOH X 122 622 122 HOH HOH . C 3 HOH X 123 623 123 HOH HOH . C 3 HOH X 124 624 124 HOH HOH . C 3 HOH X 125 625 125 HOH HOH . C 3 HOH X 126 626 126 HOH HOH . C 3 HOH X 127 627 127 HOH HOH . C 3 HOH X 128 628 128 HOH HOH . C 3 HOH X 129 629 129 HOH HOH . C 3 HOH X 130 630 130 HOH HOH . C 3 HOH X 131 631 131 HOH HOH . C 3 HOH X 132 632 132 HOH HOH . C 3 HOH X 133 633 133 HOH HOH . C 3 HOH X 134 634 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O27 CK9 . . . B 2 3.474 9.847 27.989 1 34.16 ? O27 CK9 500 X 1 HETATM 2 C C24 CK9 . . . B 2 4.132 9.728 29.194 1 34.44 ? C24 CK9 500 X 1 HETATM 3 C C23 CK9 . . . B 2 4.259 10.823 30.099 1 35.49 ? C23 CK9 500 X 1 HETATM 4 C C22 CK9 . . . B 2 4.942 10.645 31.343 1 34.8 ? C22 CK9 500 X 1 HETATM 5 C C21 CK9 . . . B 2 5.497 9.375 31.679 1 35.18 ? C21 CK9 500 X 1 HETATM 6 C C20 CK9 . . . B 2 5.371 8.283 30.774 1 35.62 ? C20 CK9 500 X 1 HETATM 7 C C19 CK9 . . . B 2 4.706 8.476 29.538 1 33.79 ? C19 CK9 500 X 1 HETATM 8 C C18 CK9 . . . B 2 4.523 7.348 28.579 1 32.69 ? C18 CK9 500 X 1 HETATM 9 N N17 CK9 . . . B 2 3.528 6.487 28.697 1 31.16 ? N17 CK9 500 X 1 HETATM 10 C C4 CK9 . . . B 2 2.424 6.465 28.168 1 32.62 ? C4 CK9 500 X 1 HETATM 11 C C5 CK9 . . . B 2 1.515 5.407 28.298 1 31.86 ? C5 CK9 500 X 1 HETATM 12 N N9 CK9 . . . B 2 1.498 4.212 28.917 1 30.13 ? N9 CK9 500 X 1 HETATM 13 C C8 CK9 . . . B 2 0.369 3.607 28.634 1 29.06 ? C8 CK9 500 X 1 HETATM 14 C C6 CK9 . . . B 2 0.265 5.538 27.584 1 32.1 ? C6 CK9 500 X 1 HETATM 15 N N7 CK9 . . . B 2 -0.445 4.386 27.811 1 29.55 ? N7 CK9 500 X 1 HETATM 16 C C10 CK9 . . . B 2 -1.809 4.059 27.248 1 29.83 ? C10 CK9 500 X 1 HETATM 17 C C12 CK9 . . . B 2 -1.637 3.709 25.781 1 26.15 ? C12 CK9 500 X 1 HETATM 18 C C11 CK9 . . . B 2 -2.932 5.114 27.375 1 28.64 ? C11 CK9 500 X 1 HETATM 19 N N3 CK9 . . . B 2 -0.034 6.631 26.807 1 33.19 ? N3 CK9 500 X 1 HETATM 20 C C2 CK9 . . . B 2 0.855 7.655 26.71 1 36.98 ? C2 CK9 500 X 1 HETATM 21 N N1 CK9 . . . B 2 2.032 7.556 27.393 1 34.35 ? N1 CK9 500 X 1 HETATM 22 N N13 CK9 . . . B 2 0.623 8.697 25.982 1 41 ? N13 CK9 500 X 1 HETATM 23 C C14 CK9 . . . B 2 -0.539 8.898 25.047 1 43.69 ? C14 CK9 500 X 1 HETATM 24 C C25 CK9 . . . B 2 -1.667 9.626 25.874 1 45.23 ? C25 CK9 500 X 1 HETATM 25 C C26 CK9 . . . B 2 -1.594 11.153 26.144 1 45.25 ? C26 CK9 500 X 1 HETATM 26 C C15 CK9 . . . B 2 -1.07 7.631 24.272 1 45.6 ? C15 CK9 500 X 1 HETATM 27 O O16 CK9 . . . B 2 -0.206 7.036 23.299 1 45.08 ? O16 CK9 500 X 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #