data_2A0I # _model_server_result.job_id x-uX7pvuYch0qc6T0uRMkw _model_server_result.datetime_utc '2025-04-28 07:51:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2a0i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 2A0I # _exptl.entry_id 2A0I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2A0I _cell.length_a 77.515 _cell.length_b 77.515 _cell.length_c 114.369 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2A0I _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O3' DT 8 B DT 8 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc2 A OP1 DG 9 B DG 9 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc3 B ND1 HIS 146 A HIS 146 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc4 B NE2 HIS 157 A HIS 157 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc5 B NE2 HIS 159 A HIS 159 1_555 C MG MG . A MG 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? hydrog TYPE_28_PAIR hydrog1 A N1 DG 5 B DG 5 1_555 A O2 DT 8 B DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog2 A O6 DG 5 B DG 5 1_555 A N3 DT 8 B DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 271 n y N1 C5 IMD sing 272 n y N1 HN1 IMD sing 273 n n C2 N3 IMD doub 274 n y C2 H2 IMD sing 275 n n N3 C4 IMD sing 276 n y N3 HN3 IMD sing 277 n n C4 C5 IMD doub 278 n y C4 H4 IMD sing 279 n n C5 H5 IMD sing 280 n n # _atom_sites.entry_id 2A0I _atom_sites.fract_transf_matrix[1][1] 0.012901 _atom_sites.fract_transf_matrix[1][2] 0.007448 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG A 1 900 900 MG MG . D 4 IMD A 1 901 901 IMD IMD . E 5 HOH B 1 23 6 HOH HOH . E 5 HOH B 2 24 13 HOH HOH . E 5 HOH B 3 25 24 HOH HOH . E 5 HOH B 4 26 42 HOH HOH . E 5 HOH B 5 27 52 HOH HOH . E 5 HOH B 6 28 59 HOH HOH . F 5 HOH A 1 902 2 HOH HOH . F 5 HOH A 2 903 3 HOH HOH . F 5 HOH A 3 904 4 HOH HOH . F 5 HOH A 4 905 5 HOH HOH . F 5 HOH A 5 906 7 HOH HOH . F 5 HOH A 6 907 8 HOH HOH . F 5 HOH A 7 908 9 HOH HOH . F 5 HOH A 8 909 10 HOH HOH . F 5 HOH A 9 910 11 HOH HOH . F 5 HOH A 10 911 12 HOH HOH . F 5 HOH A 11 912 14 HOH HOH . F 5 HOH A 12 913 15 HOH HOH . F 5 HOH A 13 914 16 HOH HOH . F 5 HOH A 14 915 17 HOH HOH . F 5 HOH A 15 916 18 HOH HOH . F 5 HOH A 16 917 19 HOH HOH . F 5 HOH A 17 918 20 HOH HOH . F 5 HOH A 18 919 21 HOH HOH . F 5 HOH A 19 920 22 HOH HOH . F 5 HOH A 20 921 23 HOH HOH . F 5 HOH A 21 922 25 HOH HOH . F 5 HOH A 22 923 26 HOH HOH . F 5 HOH A 23 924 27 HOH HOH . F 5 HOH A 24 925 28 HOH HOH . F 5 HOH A 25 926 29 HOH HOH . F 5 HOH A 26 927 30 HOH HOH . F 5 HOH A 27 928 31 HOH HOH . F 5 HOH A 28 929 32 HOH HOH . F 5 HOH A 29 930 33 HOH HOH . F 5 HOH A 30 931 34 HOH HOH . F 5 HOH A 31 932 35 HOH HOH . F 5 HOH A 32 933 36 HOH HOH . F 5 HOH A 33 934 37 HOH HOH . F 5 HOH A 34 935 38 HOH HOH . F 5 HOH A 35 936 39 HOH HOH . F 5 HOH A 36 937 40 HOH HOH . F 5 HOH A 37 938 41 HOH HOH . F 5 HOH A 38 939 43 HOH HOH . F 5 HOH A 39 940 44 HOH HOH . F 5 HOH A 40 941 45 HOH HOH . F 5 HOH A 41 942 46 HOH HOH . F 5 HOH A 42 943 47 HOH HOH . F 5 HOH A 43 944 48 HOH HOH . F 5 HOH A 44 945 49 HOH HOH . F 5 HOH A 45 946 50 HOH HOH . F 5 HOH A 46 947 51 HOH HOH . F 5 HOH A 47 948 53 HOH HOH . F 5 HOH A 48 949 54 HOH HOH . F 5 HOH A 49 950 55 HOH HOH . F 5 HOH A 50 951 56 HOH HOH . F 5 HOH A 51 952 57 HOH HOH . F 5 HOH A 52 953 58 HOH HOH . F 5 HOH A 53 954 60 HOH HOH . F 5 HOH A 54 955 61 HOH HOH . F 5 HOH A 55 956 62 HOH HOH . F 5 HOH A 56 957 63 HOH HOH . F 5 HOH A 57 958 64 HOH HOH . F 5 HOH A 58 959 65 HOH HOH . F 5 HOH A 59 960 66 HOH HOH . F 5 HOH A 60 961 67 HOH HOH . F 5 HOH A 61 962 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . D 4 -10.588 45.32 60.503 1 100.45 ? N1 IMD 901 A 1 HETATM 2 C C2 IMD . . . D 4 -11.386 46.307 60.137 1 100.19 ? C2 IMD 901 A 1 HETATM 3 N N3 IMD . . . D 4 -10.619 47.281 59.677 1 100.52 ? N3 IMD 901 A 1 HETATM 4 C C4 IMD . . . D 4 -9.349 46.902 59.758 1 100.12 ? C4 IMD 901 A 1 HETATM 5 C C5 IMD . . . D 4 -9.323 45.643 60.288 1 100.92 ? C5 IMD 901 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #