data_2A1T
#
_model_server_result.job_id            nIgRnVMCvRxBHxQ8UsaNVw 
_model_server_result.datetime_utc      '2024-12-26 14:42:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a1t 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":599}' 
#
_entry.id    2A1T 
#
_exptl.entry_id    2A1T 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2A1T 
_cell.length_a            94.184 
_cell.length_b            100.659 
_cell.length_c            244.384 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A1T 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 122 n n 
PA O2A FAD sing 123 n n 
PA O5B FAD sing 124 n n 
PA O3P FAD sing 125 n n 
O2A HOA2 FAD sing 126 n n 
O5B C5B FAD sing 127 n n 
C5B C4B FAD sing 128 n n 
C5B H51A FAD sing 129 n n 
C5B H52A FAD sing 130 n n 
C4B O4B FAD sing 131 n n 
C4B C3B FAD sing 132 n n 
C4B H4B FAD sing 133 n n 
O4B C1B FAD sing 134 n n 
C3B O3B FAD sing 135 n n 
C3B C2B FAD sing 136 n n 
C3B H3B FAD sing 137 n n 
O3B HO3A FAD sing 138 n n 
C2B O2B FAD sing 139 n n 
C2B C1B FAD sing 140 n n 
C2B H2B FAD sing 141 n n 
O2B HO2A FAD sing 142 n n 
C1B N9A FAD sing 143 n n 
C1B H1B FAD sing 144 n n 
N9A C8A FAD sing 145 n y 
N9A C4A FAD sing 146 n y 
C8A N7A FAD doub 147 n y 
C8A H8A FAD sing 148 n n 
N7A C5A FAD sing 149 n y 
C5A C6A FAD sing 150 n y 
C5A C4A FAD doub 151 n y 
C6A N6A FAD sing 152 n n 
C6A N1A FAD doub 153 n y 
N6A H61A FAD sing 154 n n 
N6A H62A FAD sing 155 n n 
N1A C2A FAD sing 156 n y 
C2A N3A FAD doub 157 n y 
C2A H2A FAD sing 158 n n 
N3A C4A FAD sing 159 n y 
N1 C2 FAD sing 160 n n 
N1 C10 FAD doub 161 n n 
C2 O2 FAD doub 162 n n 
C2 N3 FAD sing 163 n n 
N3 C4 FAD sing 164 n n 
N3 HN3 FAD sing 165 n n 
C4 O4 FAD doub 166 n n 
C4 C4X FAD sing 167 n n 
C4X N5 FAD doub 168 n n 
C4X C10 FAD sing 169 n n 
N5 C5X FAD sing 170 n n 
C5X C6 FAD doub 171 n y 
C5X C9A FAD sing 172 n y 
C6 C7 FAD sing 173 n y 
C6 H6 FAD sing 174 n n 
C7 C7M FAD sing 175 n n 
C7 C8 FAD doub 176 n y 
C7M HM71 FAD sing 177 n n 
C7M HM72 FAD sing 178 n n 
C7M HM73 FAD sing 179 n n 
C8 C8M FAD sing 180 n n 
C8 C9 FAD sing 181 n y 
C8M HM81 FAD sing 182 n n 
C8M HM82 FAD sing 183 n n 
C8M HM83 FAD sing 184 n n 
C9 C9A FAD doub 185 n y 
C9 H9 FAD sing 186 n n 
C9A N10 FAD sing 187 n n 
N10 C10 FAD sing 188 n n 
N10 C1' FAD sing 189 n n 
C1' C2' FAD sing 190 n n 
C1' "H1'1" FAD sing 191 n n 
C1' "H1'2" FAD sing 192 n n 
C2' O2' FAD sing 193 n n 
C2' C3' FAD sing 194 n n 
C2' H2' FAD sing 195 n n 
O2' HO2' FAD sing 196 n n 
C3' O3' FAD sing 197 n n 
C3' C4' FAD sing 198 n n 
C3' H3' FAD sing 199 n n 
O3' HO3' FAD sing 200 n n 
C4' O4' FAD sing 201 n n 
C4' C5' FAD sing 202 n n 
C4' H4' FAD sing 203 n n 
O4' HO4' FAD sing 204 n n 
C5' O5' FAD sing 205 n n 
C5' "H5'1" FAD sing 206 n n 
C5' "H5'2" FAD sing 207 n n 
O5' P FAD sing 208 n n 
P O1P FAD doub 209 n n 
P O2P FAD sing 210 n n 
P O3P FAD sing 211 n n 
O2P HOP2 FAD sing 212 n n 
#
_atom_sites.entry_id                     2A1T 
_atom_sites.fract_transf_matrix[1][1]    0.010618 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009935 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004092 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 FAD A 1 399 399 FAD FAD . 
H 4 FAD B 1 1399 399 FAD FAD . 
I 4 FAD C 1 2399 399 FAD FAD . 
J 4 FAD D 1 3399 399 FAD FAD . 
K 4 FAD R 1 599 599 FAD FAD . 
L 5 AMP S 1 600 600 AMP AMP . 
M 6 HOH A 1 400 1 HOH HOH . 
M 6 HOH A 2 401 2 HOH HOH . 
M 6 HOH A 3 402 3 HOH HOH . 
M 6 HOH A 4 403 4 HOH HOH . 
M 6 HOH A 5 404 5 HOH HOH . 
M 6 HOH A 6 405 6 HOH HOH . 
M 6 HOH A 7 406 7 HOH HOH . 
M 6 HOH A 8 407 8 HOH HOH . 
M 6 HOH A 9 408 9 HOH HOH . 
M 6 HOH A 10 409 10 HOH HOH . 
M 6 HOH A 11 410 11 HOH HOH . 
M 6 HOH A 12 411 12 HOH HOH . 
M 6 HOH A 13 412 13 HOH HOH . 
N 6 HOH B 1 1400 14 HOH HOH . 
N 6 HOH B 2 1401 16 HOH HOH . 
N 6 HOH B 3 1402 18 HOH HOH . 
N 6 HOH B 4 1403 17 HOH HOH . 
N 6 HOH B 5 1404 19 HOH HOH . 
N 6 HOH B 6 1405 20 HOH HOH . 
N 6 HOH B 7 1406 22 HOH HOH . 
N 6 HOH B 8 1407 23 HOH HOH . 
N 6 HOH B 9 1408 24 HOH HOH . 
O 6 HOH C 1 2400 15 HOH HOH . 
O 6 HOH C 2 2401 25 HOH HOH . 
O 6 HOH C 3 2402 26 HOH HOH . 
O 6 HOH C 4 2403 27 HOH HOH . 
O 6 HOH C 5 2404 28 HOH HOH . 
O 6 HOH C 6 2405 29 HOH HOH . 
O 6 HOH C 7 2406 30 HOH HOH . 
O 6 HOH C 8 2407 31 HOH HOH . 
O 6 HOH C 9 2408 32 HOH HOH . 
O 6 HOH C 10 2409 33 HOH HOH . 
O 6 HOH C 11 2410 34 HOH HOH . 
O 6 HOH C 12 2411 35 HOH HOH . 
O 6 HOH C 13 2412 36 HOH HOH . 
O 6 HOH C 14 2413 37 HOH HOH . 
O 6 HOH C 15 2414 38 HOH HOH . 
O 6 HOH C 16 2415 39 HOH HOH . 
O 6 HOH C 17 2416 40 HOH HOH . 
P 6 HOH D 1 3400 21 HOH HOH . 
P 6 HOH D 2 3401 41 HOH HOH . 
P 6 HOH D 3 3402 42 HOH HOH . 
P 6 HOH D 4 3403 43 HOH HOH . 
P 6 HOH D 5 3404 44 HOH HOH . 
P 6 HOH D 6 3405 45 HOH HOH . 
P 6 HOH D 7 3406 46 HOH HOH . 
P 6 HOH D 8 3407 47 HOH HOH . 
P 6 HOH D 9 3408 48 HOH HOH . 
P 6 HOH D 10 3409 49 HOH HOH . 
P 6 HOH D 11 3410 62 HOH HOH . 
P 6 HOH D 12 3411 63 HOH HOH . 
Q 6 HOH R 1 600 50 HOH HOH . 
Q 6 HOH R 2 601 51 HOH HOH . 
Q 6 HOH R 3 602 64 HOH HOH . 
R 6 HOH S 1 601 52 HOH HOH . 
R 6 HOH S 2 602 53 HOH HOH . 
R 6 HOH S 3 603 54 HOH HOH . 
R 6 HOH S 4 604 55 HOH HOH . 
R 6 HOH S 5 605 56 HOH HOH . 
R 6 HOH S 6 606 57 HOH HOH . 
R 6 HOH S 7 607 58 HOH HOH . 
R 6 HOH S 8 608 59 HOH HOH . 
R 6 HOH S 9 609 60 HOH HOH . 
R 6 HOH S 10 610 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . K 4 34.208 41.324 2.303 1 65 ? PA FAD 599 R 1 
HETATM 2 O O1A FAD . . . K 4 33.405 41.03 3.55 1 65.71 ? O1A FAD 599 R 1 
HETATM 3 O O2A FAD . . . K 4 35.643 40.836 2.394 1 65.28 ? O2A FAD 599 R 1 
HETATM 4 O O5B FAD . . . K 4 33.442 40.697 1.024 1 64.81 ? O5B FAD 599 R 1 
HETATM 5 C C5B FAD . . . K 4 34.102 40.233 -0.126 1 63.27 ? C5B FAD 599 R 1 
HETATM 6 C C4B FAD . . . K 4 33.158 39.284 -0.834 1 63.31 ? C4B FAD 599 R 1 
HETATM 7 O O4B FAD . . . K 4 33.459 39.394 -2.202 1 63.64 ? O4B FAD 599 R 1 
HETATM 8 C C3B FAD . . . K 4 33.295 37.808 -0.42 1 63.8 ? C3B FAD 599 R 1 
HETATM 9 O O3B FAD . . . K 4 32.071 37.274 0.073 1 62.72 ? O3B FAD 599 R 1 
HETATM 10 C C2B FAD . . . K 4 33.794 37.108 -1.692 1 64.21 ? C2B FAD 599 R 1 
HETATM 11 O O2B FAD . . . K 4 33.259 35.809 -1.911 1 62.69 ? O2B FAD 599 R 1 
HETATM 12 C C1B FAD . . . K 4 33.385 38.103 -2.779 1 64.9 ? C1B FAD 599 R 1 
HETATM 13 N N9A FAD . . . K 4 34.188 38.065 -4.015 1 65.78 ? N9A FAD 599 R 1 
HETATM 14 C C8A FAD . . . K 4 35.549 38.209 -4.141 1 65.62 ? C8A FAD 599 R 1 
HETATM 15 N N7A FAD . . . K 4 35.858 38.13 -5.457 1 65.76 ? N7A FAD 599 R 1 
HETATM 16 C C5A FAD . . . K 4 34.718 37.947 -6.182 1 66.3 ? C5A FAD 599 R 1 
HETATM 17 C C6A FAD . . . K 4 34.468 37.807 -7.561 1 64.97 ? C6A FAD 599 R 1 
HETATM 18 N N6A FAD . . . K 4 35.327 38.352 -8.434 1 62.29 ? N6A FAD 599 R 1 
HETATM 19 N N1A FAD . . . K 4 33.147 37.611 -7.958 1 65.24 ? N1A FAD 599 R 1 
HETATM 20 C C2A FAD . . . K 4 32.086 37.59 -7.061 1 65.27 ? C2A FAD 599 R 1 
HETATM 21 N N3A FAD . . . K 4 32.352 37.736 -5.712 1 65.86 ? N3A FAD 599 R 1 
HETATM 22 C C4A FAD . . . K 4 33.646 37.91 -5.277 1 66.65 ? C4A FAD 599 R 1 
HETATM 23 N N1 FAD . . . K 4 30.871 47.759 6.577 1 71.26 ? N1 FAD 599 R 1 
HETATM 24 C C2 FAD . . . K 4 30.06 48.407 5.659 1 71.06 ? C2 FAD 599 R 1 
HETATM 25 O O2 FAD . . . K 4 30.027 48.052 4.477 1 70.91 ? O2 FAD 599 R 1 
HETATM 26 N N3 FAD . . . K 4 29.312 49.493 6.06 1 71.08 ? N3 FAD 599 R 1 
HETATM 27 C C4 FAD . . . K 4 29.351 49.912 7.376 1 70.84 ? C4 FAD 599 R 1 
HETATM 28 O O4 FAD . . . K 4 28.955 51.051 7.6 1 70.55 ? O4 FAD 599 R 1 
HETATM 29 C C4X FAD . . . K 4 30.164 49.256 8.305 1 71.01 ? C4X FAD 599 R 1 
HETATM 30 N N5 FAD . . . K 4 30.211 49.656 9.625 1 71.12 ? N5 FAD 599 R 1 
HETATM 31 C C5X FAD . . . K 4 31.011 49.011 10.548 1 71.07 ? C5X FAD 599 R 1 
HETATM 32 C C6 FAD . . . K 4 31.027 49.447 11.874 1 70.9 ? C6 FAD 599 R 1 
HETATM 33 C C7 FAD . . . K 4 31.822 48.812 12.821 1 70.73 ? C7 FAD 599 R 1 
HETATM 34 C C7M FAD . . . K 4 31.799 49.335 14.227 1 70.99 ? C7M FAD 599 R 1 
HETATM 35 C C8 FAD . . . K 4 32.601 47.726 12.443 1 70.85 ? C8 FAD 599 R 1 
HETATM 36 C C8M FAD . . . K 4 33.475 47.006 13.428 1 70.9 ? C8M FAD 599 R 1 
HETATM 37 C C9 FAD . . . K 4 32.576 47.285 11.119 1 71.03 ? C9 FAD 599 R 1 
HETATM 38 C C9A FAD . . . K 4 31.785 47.926 10.154 1 70.95 ? C9A FAD 599 R 1 
HETATM 39 N N10 FAD . . . K 4 31.733 47.51 8.822 1 70.58 ? N10 FAD 599 R 1 
HETATM 40 C C10 FAD . . . K 4 30.934 48.174 7.902 1 70.92 ? C10 FAD 599 R 1 
HETATM 41 C C1' FAD . . . K 4 32.555 46.361 8.32 1 70.22 ? C1' FAD 599 R 1 
HETATM 42 C C2' FAD . . . K 4 31.785 45.078 8.13 1 68.14 ? C2' FAD 599 R 1 
HETATM 43 O O2' FAD . . . K 4 31.76 44.374 9.365 1 67.25 ? O2' FAD 599 R 1 
HETATM 44 C C3' FAD . . . K 4 32.481 44.304 6.999 1 67.5 ? C3' FAD 599 R 1 
HETATM 45 O O3' FAD . . . K 4 33.88 44.589 6.989 1 65.97 ? O3' FAD 599 R 1 
HETATM 46 C C4' FAD . . . K 4 31.936 44.626 5.598 1 66.4 ? C4' FAD 599 R 1 
HETATM 47 O O4' FAD . . . K 4 30.532 44.573 5.447 1 66.75 ? O4' FAD 599 R 1 
HETATM 48 C C5' FAD . . . K 4 32.49 43.643 4.595 1 64.76 ? C5' FAD 599 R 1 
HETATM 49 O O5' FAD . . . K 4 32.808 44.407 3.474 1 63.54 ? O5' FAD 599 R 1 
HETATM 50 P P FAD . . . K 4 32.785 43.735 2.023 1 62.57 ? P FAD 599 R 1 
HETATM 51 O O1P FAD . . . K 4 31.551 42.902 1.856 1 61.46 ? O1P FAD 599 R 1 
HETATM 52 O O2P FAD . . . K 4 32.919 44.764 0.928 1 63.85 ? O2P FAD 599 R 1 
HETATM 53 O O3P FAD . . . K 4 34.156 42.902 2.037 1 64.34 ? O3P FAD 599 R 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           53 
#