data_2A2D
#
_model_server_result.job_id            UmW6mN9hQk9vnM_XDV3zeQ 
_model_server_result.datetime_utc      '2024-11-14 05:03:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a2d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":460}' 
#
_entry.id    2A2D 
#
_exptl.entry_id    2A2D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2A2D 
_cell.length_a            119.1 
_cell.length_b            119.1 
_cell.length_c            65.9 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A2D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 167 A SER 147 1_555 C MN MN . A MN 460 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc2 C MN MN . A MN 460 1_555 D O2A ANP . A ANP 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc3 C MN MN . A MN 460 1_555 D O1B ANP . A ANP 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc4 C MN MN . A MN 460 1_555 D O1G ANP . A ANP 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? 
metalc ? metalc5 C MN MN . A MN 460 1_555 E O HOH . A HOH 463 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc6 C MN MN . A MN 460 1_555 E O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.831 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2A2D 
_atom_sites.fract_transf_matrix[1][1]    0.008396 
_atom_sites.fract_transf_matrix[1][2]    0.004848 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009695 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015175 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 A2G A 1 459 2 A2G NGA . 
C 3 MN A 1 460 3 MN MN . 
D 4 ANP A 1 461 1 ANP ANP . 
E 5 HOH A 1 462 4 HOH HOH . 
E 5 HOH A 2 463 5 HOH HOH . 
E 5 HOH A 3 464 6 HOH HOH . 
E 5 HOH A 4 465 7 HOH HOH . 
E 5 HOH A 5 466 8 HOH HOH . 
E 5 HOH A 6 467 9 HOH HOH . 
E 5 HOH A 7 468 10 HOH HOH . 
E 5 HOH A 8 469 11 HOH HOH . 
E 5 HOH A 9 470 12 HOH HOH . 
E 5 HOH A 10 471 13 HOH HOH . 
E 5 HOH A 11 472 14 HOH HOH . 
E 5 HOH A 12 473 15 HOH HOH . 
E 5 HOH A 13 474 16 HOH HOH . 
E 5 HOH A 14 475 17 HOH HOH . 
E 5 HOH A 15 476 18 HOH HOH . 
E 5 HOH A 16 477 19 HOH HOH . 
E 5 HOH A 17 478 20 HOH HOH . 
E 5 HOH A 18 479 21 HOH HOH . 
E 5 HOH A 19 480 22 HOH HOH . 
E 5 HOH A 20 481 23 HOH HOH . 
E 5 HOH A 21 482 24 HOH HOH . 
E 5 HOH A 22 483 25 HOH HOH . 
E 5 HOH A 23 484 26 HOH HOH . 
E 5 HOH A 24 485 27 HOH HOH . 
E 5 HOH A 25 486 28 HOH HOH . 
E 5 HOH A 26 487 29 HOH HOH . 
E 5 HOH A 27 488 30 HOH HOH . 
E 5 HOH A 28 489 31 HOH HOH . 
E 5 HOH A 29 490 32 HOH HOH . 
E 5 HOH A 30 491 33 HOH HOH . 
E 5 HOH A 31 492 34 HOH HOH . 
E 5 HOH A 32 493 35 HOH HOH . 
E 5 HOH A 33 494 36 HOH HOH . 
E 5 HOH A 34 495 37 HOH HOH . 
E 5 HOH A 35 496 38 HOH HOH . 
E 5 HOH A 36 497 39 HOH HOH . 
E 5 HOH A 37 498 40 HOH HOH . 
E 5 HOH A 38 499 41 HOH HOH . 
E 5 HOH A 39 500 42 HOH HOH . 
E 5 HOH A 40 501 43 HOH HOH . 
E 5 HOH A 41 502 44 HOH HOH . 
E 5 HOH A 42 503 45 HOH HOH . 
E 5 HOH A 43 504 46 HOH HOH . 
E 5 HOH A 44 505 47 HOH HOH . 
E 5 HOH A 45 506 48 HOH HOH . 
E 5 HOH A 46 507 49 HOH HOH . 
E 5 HOH A 47 508 50 HOH HOH . 
E 5 HOH A 48 509 51 HOH HOH . 
E 5 HOH A 49 510 52 HOH HOH . 
E 5 HOH A 50 511 53 HOH HOH . 
E 5 HOH A 51 512 54 HOH HOH . 
E 5 HOH A 52 513 55 HOH HOH . 
E 5 HOH A 53 514 56 HOH HOH . 
E 5 HOH A 54 515 57 HOH HOH . 
E 5 HOH A 55 516 58 HOH HOH . 
E 5 HOH A 56 517 59 HOH HOH . 
E 5 HOH A 57 518 60 HOH HOH . 
E 5 HOH A 58 519 61 HOH HOH . 
E 5 HOH A 59 520 62 HOH HOH . 
E 5 HOH A 60 521 63 HOH HOH . 
E 5 HOH A 61 522 64 HOH HOH . 
E 5 HOH A 62 523 65 HOH HOH . 
E 5 HOH A 63 524 66 HOH HOH . 
E 5 HOH A 64 525 67 HOH HOH . 
E 5 HOH A 65 526 68 HOH HOH . 
E 5 HOH A 66 527 69 HOH HOH . 
E 5 HOH A 67 528 70 HOH HOH . 
E 5 HOH A 68 529 71 HOH HOH . 
E 5 HOH A 69 530 72 HOH HOH . 
E 5 HOH A 70 531 73 HOH HOH . 
E 5 HOH A 71 532 74 HOH HOH . 
E 5 HOH A 72 533 75 HOH HOH . 
E 5 HOH A 73 534 76 HOH HOH . 
E 5 HOH A 74 535 77 HOH HOH . 
E 5 HOH A 75 536 78 HOH HOH . 
E 5 HOH A 76 537 79 HOH HOH . 
E 5 HOH A 77 538 80 HOH HOH . 
E 5 HOH A 78 539 81 HOH HOH . 
E 5 HOH A 79 540 82 HOH HOH . 
E 5 HOH A 80 541 83 HOH HOH . 
E 5 HOH A 81 542 84 HOH HOH . 
E 5 HOH A 82 543 85 HOH HOH . 
E 5 HOH A 83 544 86 HOH HOH . 
E 5 HOH A 84 545 87 HOH HOH . 
E 5 HOH A 85 546 88 HOH HOH . 
E 5 HOH A 86 547 89 HOH HOH . 
E 5 HOH A 87 548 90 HOH HOH . 
E 5 HOH A 88 549 91 HOH HOH . 
E 5 HOH A 89 550 92 HOH HOH . 
E 5 HOH A 90 551 93 HOH HOH . 
E 5 HOH A 91 552 94 HOH HOH . 
E 5 HOH A 92 553 95 HOH HOH . 
E 5 HOH A 93 554 96 HOH HOH . 
E 5 HOH A 94 555 97 HOH HOH . 
E 5 HOH A 95 556 98 HOH HOH . 
E 5 HOH A 96 557 99 HOH HOH . 
E 5 HOH A 97 558 100 HOH HOH . 
E 5 HOH A 98 559 101 HOH HOH . 
E 5 HOH A 99 560 102 HOH HOH . 
E 5 HOH A 100 561 103 HOH HOH . 
E 5 HOH A 101 562 104 HOH HOH . 
E 5 HOH A 102 563 105 HOH HOH . 
E 5 HOH A 103 564 106 HOH HOH . 
E 5 HOH A 104 565 107 HOH HOH . 
E 5 HOH A 105 566 108 HOH HOH . 
E 5 HOH A 106 567 109 HOH HOH . 
E 5 HOH A 107 568 110 HOH HOH . 
E 5 HOH A 108 569 111 HOH HOH . 
E 5 HOH A 109 570 112 HOH HOH . 
E 5 HOH A 110 571 113 HOH HOH . 
E 5 HOH A 111 572 114 HOH HOH . 
E 5 HOH A 112 573 115 HOH HOH . 
E 5 HOH A 113 574 116 HOH HOH . 
E 5 HOH A 114 575 117 HOH HOH . 
E 5 HOH A 115 576 118 HOH HOH . 
E 5 HOH A 116 577 119 HOH HOH . 
E 5 HOH A 117 578 120 HOH HOH . 
E 5 HOH A 118 579 121 HOH HOH . 
E 5 HOH A 119 580 122 HOH HOH . 
E 5 HOH A 120 581 123 HOH HOH . 
E 5 HOH A 121 582 124 HOH HOH . 
E 5 HOH A 122 583 125 HOH HOH . 
E 5 HOH A 123 584 126 HOH HOH . 
E 5 HOH A 124 585 127 HOH HOH . 
E 5 HOH A 125 586 128 HOH HOH . 
E 5 HOH A 126 587 129 HOH HOH . 
E 5 HOH A 127 588 130 HOH HOH . 
E 5 HOH A 128 589 131 HOH HOH . 
E 5 HOH A 129 590 132 HOH HOH . 
E 5 HOH A 130 591 133 HOH HOH . 
E 5 HOH A 131 592 134 HOH HOH . 
E 5 HOH A 132 593 135 HOH HOH . 
E 5 HOH A 133 594 136 HOH HOH . 
E 5 HOH A 134 595 137 HOH HOH . 
E 5 HOH A 135 596 138 HOH HOH . 
E 5 HOH A 136 597 139 HOH HOH . 
E 5 HOH A 137 598 140 HOH HOH . 
E 5 HOH A 138 599 141 HOH HOH . 
E 5 HOH A 139 600 142 HOH HOH . 
E 5 HOH A 140 601 143 HOH HOH . 
E 5 HOH A 141 602 144 HOH HOH . 
E 5 HOH A 142 603 145 HOH HOH . 
E 5 HOH A 143 604 146 HOH HOH . 
E 5 HOH A 144 605 147 HOH HOH . 
E 5 HOH A 145 606 148 HOH HOH . 
E 5 HOH A 146 607 149 HOH HOH . 
E 5 HOH A 147 608 150 HOH HOH . 
E 5 HOH A 148 609 151 HOH HOH . 
E 5 HOH A 149 610 152 HOH HOH . 
E 5 HOH A 150 611 153 HOH HOH . 
E 5 HOH A 151 612 154 HOH HOH . 
E 5 HOH A 152 613 155 HOH HOH . 
E 5 HOH A 153 614 156 HOH HOH . 
E 5 HOH A 154 615 157 HOH HOH . 
E 5 HOH A 155 616 158 HOH HOH . 
E 5 HOH A 156 617 159 HOH HOH . 
E 5 HOH A 157 618 160 HOH HOH . 
E 5 HOH A 158 619 161 HOH HOH . 
E 5 HOH A 159 620 162 HOH HOH . 
E 5 HOH A 160 621 163 HOH HOH . 
E 5 HOH A 161 622 164 HOH HOH . 
E 5 HOH A 162 623 165 HOH HOH . 
E 5 HOH A 163 624 166 HOH HOH . 
E 5 HOH A 164 625 167 HOH HOH . 
E 5 HOH A 165 626 168 HOH HOH . 
E 5 HOH A 166 627 169 HOH HOH . 
E 5 HOH A 167 628 170 HOH HOH . 
E 5 HOH A 168 629 171 HOH HOH . 
E 5 HOH A 169 630 172 HOH HOH . 
E 5 HOH A 170 631 173 HOH HOH . 
E 5 HOH A 171 632 174 HOH HOH . 
E 5 HOH A 172 633 175 HOH HOH . 
E 5 HOH A 173 634 176 HOH HOH . 
E 5 HOH A 174 635 177 HOH HOH . 
E 5 HOH A 175 636 178 HOH HOH . 
E 5 HOH A 176 637 179 HOH HOH . 
E 5 HOH A 177 638 180 HOH HOH . 
E 5 HOH A 178 639 181 HOH HOH . 
E 5 HOH A 179 640 182 HOH HOH . 
E 5 HOH A 180 641 183 HOH HOH . 
E 5 HOH A 181 642 184 HOH HOH . 
E 5 HOH A 182 643 185 HOH HOH . 
E 5 HOH A 183 644 186 HOH HOH . 
E 5 HOH A 184 645 187 HOH HOH . 
E 5 HOH A 185 646 188 HOH HOH . 
E 5 HOH A 186 647 189 HOH HOH . 
E 5 HOH A 187 648 190 HOH HOH . 
E 5 HOH A 188 649 191 HOH HOH . 
E 5 HOH A 189 650 192 HOH HOH . 
E 5 HOH A 190 651 193 HOH HOH . 
E 5 HOH A 191 652 194 HOH HOH . 
E 5 HOH A 192 653 195 HOH HOH . 
E 5 HOH A 193 654 196 HOH HOH . 
E 5 HOH A 194 655 197 HOH HOH . 
E 5 HOH A 195 656 198 HOH HOH . 
E 5 HOH A 196 657 199 HOH HOH . 
E 5 HOH A 197 658 200 HOH HOH . 
E 5 HOH A 198 659 201 HOH HOH . 
E 5 HOH A 199 660 202 HOH HOH . 
E 5 HOH A 200 661 203 HOH HOH . 
E 5 HOH A 201 662 204 HOH HOH . 
E 5 HOH A 202 663 205 HOH HOH . 
E 5 HOH A 203 664 206 HOH HOH . 
E 5 HOH A 204 665 207 HOH HOH . 
E 5 HOH A 205 666 208 HOH HOH . 
E 5 HOH A 206 667 209 HOH HOH . 
E 5 HOH A 207 668 210 HOH HOH . 
E 5 HOH A 208 669 211 HOH HOH . 
E 5 HOH A 209 670 212 HOH HOH . 
E 5 HOH A 210 671 213 HOH HOH . 
E 5 HOH A 211 672 214 HOH HOH . 
E 5 HOH A 212 673 215 HOH HOH . 
E 5 HOH A 213 674 216 HOH HOH . 
E 5 HOH A 214 675 217 HOH HOH . 
E 5 HOH A 215 676 218 HOH HOH . 
E 5 HOH A 216 677 219 HOH HOH . 
E 5 HOH A 217 678 220 HOH HOH . 
E 5 HOH A 218 679 221 HOH HOH . 
E 5 HOH A 219 680 222 HOH HOH . 
E 5 HOH A 220 681 223 HOH HOH . 
E 5 HOH A 221 682 224 HOH HOH . 
E 5 HOH A 222 683 225 HOH HOH . 
E 5 HOH A 223 684 226 HOH HOH . 
E 5 HOH A 224 685 227 HOH HOH . 
E 5 HOH A 225 686 228 HOH HOH . 
E 5 HOH A 226 687 229 HOH HOH . 
E 5 HOH A 227 688 230 HOH HOH . 
E 5 HOH A 228 689 231 HOH HOH . 
E 5 HOH A 229 690 232 HOH HOH . 
E 5 HOH A 230 691 233 HOH HOH . 
E 5 HOH A 231 692 234 HOH HOH . 
E 5 HOH A 232 693 235 HOH HOH . 
E 5 HOH A 233 694 236 HOH HOH . 
E 5 HOH A 234 695 237 HOH HOH . 
E 5 HOH A 235 696 238 HOH HOH . 
E 5 HOH A 236 697 239 HOH HOH . 
E 5 HOH A 237 698 240 HOH HOH . 
E 5 HOH A 238 699 241 HOH HOH . 
E 5 HOH A 239 700 242 HOH HOH . 
E 5 HOH A 240 701 243 HOH HOH . 
E 5 HOH A 241 702 244 HOH HOH . 
E 5 HOH A 242 703 245 HOH HOH . 
E 5 HOH A 243 704 246 HOH HOH . 
E 5 HOH A 244 705 247 HOH HOH . 
E 5 HOH A 245 706 248 HOH HOH . 
E 5 HOH A 246 707 249 HOH HOH . 
E 5 HOH A 247 708 250 HOH HOH . 
E 5 HOH A 248 709 251 HOH HOH . 
E 5 HOH A 249 710 252 HOH HOH . 
E 5 HOH A 250 711 253 HOH HOH . 
E 5 HOH A 251 712 254 HOH HOH . 
E 5 HOH A 252 713 255 HOH HOH . 
E 5 HOH A 253 714 256 HOH HOH . 
E 5 HOH A 254 715 257 HOH HOH . 
E 5 HOH A 255 716 258 HOH HOH . 
E 5 HOH A 256 717 259 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               17.584 
_atom_site.Cartn_y               75.386 
_atom_site.Cartn_z               -3.449 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.74 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           460 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#