data_2A2G
#
_model_server_result.job_id            nWDVxVseHyg2wGqKJik1Mg 
_model_server_result.datetime_utc      '2024-10-18 04:35:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2a2g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    2A2G 
#
_exptl.entry_id    2A2G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              152.233 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'D-LIMONENE 1,2-EPOXIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2A2G 
_cell.length_a            62.81 
_cell.length_b            98.01 
_cell.length_c            123.37 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2A2G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 83 A CYS 64 1_555 A SG CYS 176 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 83 B CYS 64 1_555 B SG CYS 176 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 C SG CYS 83 C CYS 64 1_555 C SG CYS 176 C CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 83 D CYS 64 1_555 D SG CYS 176 D CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C10 H16 O' 
_chem_comp.formula_weight    152.233 
_chem_comp.id                LEO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'D-LIMONENE 1,2-EPOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C6 LEO sing 171 n n 
C2 C7 LEO sing 172 n n 
C2 H21 LEO sing 173 n n 
C2 H22 LEO sing 174 n n 
C3 C5 LEO sing 175 n n 
C3 C7 LEO sing 176 n n 
C3 C8 LEO sing 177 n n 
C3 O14 LEO sing 178 n n 
C4 C5 LEO sing 179 n n 
C4 C6 LEO sing 180 n n 
C4 H41 LEO sing 181 n n 
C4 H42 LEO sing 182 n n 
C5 H51 LEO sing 183 n n 
C5 H52 LEO sing 184 n n 
C6 C17 LEO sing 185 n n 
C6 H6 LEO sing 186 n n 
C7 O14 LEO sing 187 n n 
C7 H7 LEO sing 188 n n 
C8 H81 LEO sing 189 n n 
C8 H82 LEO sing 190 n n 
C8 H83 LEO sing 191 n n 
C17 C21 LEO doub 192 n n 
C17 C22 LEO sing 193 n n 
C21 H211 LEO sing 194 n n 
C21 H212 LEO sing 195 n n 
C22 H221 LEO sing 196 n n 
C22 H222 LEO sing 197 n n 
C22 H223 LEO sing 198 n n 
#
_atom_sites.entry_id                     2A2G 
_atom_sites.fract_transf_matrix[1][1]    0.015921 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010203 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 LEO A 1 201 201 LEO LEO . 
F 2 LEO B 1 202 202 LEO LEO . 
G 2 LEO C 1 203 203 LEO LEO . 
H 2 LEO D 1 204 204 LEO LEO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 LEO . . . E 2 21.34 1.453 58.797 0 0 ? C2 LEO 201 A 1 
HETATM 2 C C3 LEO . . . E 2 19.402 2.497 57.416 0 0 ? C3 LEO 201 A 1 
HETATM 3 C C4 LEO . . . E 2 19.092 0.383 58.81 0 0 ? C4 LEO 201 A 1 
HETATM 4 C C5 LEO . . . E 2 18.539 1.276 57.684 0 0 ? C5 LEO 201 A 1 
HETATM 5 C C6 LEO . . . E 2 20.6 0.104 58.634 0 0 ? C6 LEO 201 A 1 
HETATM 6 C C7 LEO . . . E 2 20.775 2.559 57.945 0 0 ? C7 LEO 201 A 1 
HETATM 7 C C8 LEO . . . E 2 18.686 3.78 57.067 0 0 ? C8 LEO 201 A 1 
HETATM 8 O O14 LEO . . . E 2 20.558 2.23 56.526 0 0 ? O14 LEO 201 A 1 
HETATM 9 C C17 LEO . . . E 2 20.937 -0.68 57.357 0 0 ? C17 LEO 201 A 1 
HETATM 10 C C21 LEO . . . E 2 20.095 -0.76 56.345 0 0 ? C21 LEO 201 A 1 
HETATM 11 C C22 LEO . . . E 2 22.244 -1.448 57.328 0 0 ? C22 LEO 201 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           11 
#